Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yfeW [C]

Identifier: 41409259

GI number: 41409259

Start: 3514097

End: 3514861

Strand: Reverse

Name: yfeW [C]

Synonym: MAP3161c

Alternate gene names: 41409259

Gene position: 3514861-3514097 (Counterclockwise)

Preceding gene: 41409260

Following gene: 41409256

Centisome position: 72.77

GC content: 68.89

Gene sequence:

>765_bases
GTGCAGCACCACGTGTTCGGGCCGCTCGACATGCACGACACCCGGTATCTTCCGCCGGCCAAGGCGTGCGGCCCGCATAT
CATCCGGGGAGCCGCGATCGCCTGGGCGCCGAACGGCGAGCCGACGACGGAGTGCCCCGAATGGACTTGGCGCACAACAC
TTTTGCCGCGCATCGCGCCGACTGCACGTGACGAGGAAAGCAGGGACGACCCGAGCAAGAACCCGGATTACTATGCCCTG
CTGCGGGGTACGGTGCACGACCCGACGGCCCGCCGGATGGGCGGCGTGGCCGGCAACGCCGGCGTGTTCTCCACGGCGCA
CGACGTCGGCGTCTATGCGCAGGCCCTGCTGGATCGGCTGGCCGGGCGCCCGAGTGACTTTCCACTGCAGCAGGGCACTG
TCGAGCTGATGACGACCCCGCAGCAACCGGGCCATGACCCCCGACAACTGGAAGCGGCCAACCGTGCCGCCCGGTCAGGC
ACGCCGAACTATCCGGCGATCAAGGGGCAGAACCTGTTCGGGTTCGGCTGGGACATCGACACCGGCTACTCCAGGCCGCG
GGGACGCGTCTTTCCCATCGGCAGCTTCGGCAACACCGGATTCACCGGAACCACGCTGTGGATGGACCCGGGCTCGGACA
CCTACGTGATCCTGCTGTCCAACTCGATCCACCTGCGGGGCAGCCCGCCGATCTCGAATCTGCGCGGTGACGTGGCCACC
GCCGCCGCCCGGGCCCTACACCTTTACGGCGCCGCCCCGCCGTAG

Upstream 100 bases:

>100_bases
GCAGTCGGCACCCGCCGGGGAGTTCCGCTACTCCGACATCAATTACCTGCTGCTCGGCGCGCTGCTCGAGAAGATCACCG
GCGAGGACGAGGACGACTAC

Downstream 100 bases:

>100_bases
CGCTGAAGACCCAAAAGCTATGCGTCCGGCTCCATTTCAAGCAGCCGCAATGGATGCAGGCCGTCGACCGCGCCGACGAA
CGGCGGGTGGATGCTGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Superfamily Metal-Dependent Hydrolase; Esterase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL
LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG
TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT
AAARALHLYGAAPP

Sequences:

>Translated_254_residues
MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL
LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG
TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT
AAARALHLYGAAPP
>Mature_254_residues
MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL
LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG
TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT
AAARALHLYGAAPP

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27444; Mature: 27444

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAP
CCCCCCCCCCCCCCCCCCCHHHCCCCEECCCEEEECCCCCCCCCCCCCEEHHECCCCCCC
TARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRL
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
AGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSGTPNYPAIKGQNLFGFGWDID
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
TGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCHHHHCCHHHH
AAARALHLYGAAPP
HHHHHHHEECCCCC
>Mature Secondary Structure
MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAP
CCCCCCCCCCCCCCCCCCCHHHCCCCEECCCEEEECCCCCCCCCCCCCEEHHECCCCCCC
TARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRL
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
AGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSGTPNYPAIKGQNLFGFGWDID
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
TGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCHHHHCCHHHH
AAARALHLYGAAPP
HHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA