| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ilvH
Identifier: 41409135
GI number: 41409135
Start: 3378526
End: 3379032
Strand: Reverse
Name: ilvH
Synonym: MAP3037c
Alternate gene names: 41409135
Gene position: 3379032-3378526 (Counterclockwise)
Preceding gene: 41409136
Following gene: 41409134
Centisome position: 69.96
GC content: 64.1
Gene sequence:
>507_bases ATGAGTCCGCAGACGCACACGCTGTCGGTGCTGGTCGAAGACAAACCGGGTGTGCTCGCCCGGGTGGCGGCGCTGTTCAG CCGGCGCGGTTTCAACATCGAATCGCTTGCGGTCGGTGCCACCGAGCAGAAGGACATGTCGCGGATGACGATCGTGGTCT CCGCCGAGGAGACCCCGCTCGAGCAGATCACCAAGCAGCTCAACAAGCTGATCAACGTCATCAAGATCGTTGAGCTGGAG GACGGCAACTCGGTGTCGCGGGAATTGGCGTTGATCAAGGTGCGCGCCGACGCCGGCACCCGCAGTCAGGTTATCGAGGC GGTGAACCTGTTCCGCGCCAAGGTGATTGACGTTTCGCCGGAGGCGCTGACGATCGAGGCCACCGGTGACCGCGGCAAGA TCGAGGCGCTGCTGCGGGTGCTGGAGCCCTTCGGCATCCGTGAGATCGTCCAATCGGGAGTGGTGTCGCTGTCCCGCGGT CCGCGCGGAATCGGCACGGCCAAGTAA
Upstream 100 bases:
>100_bases AGGTGTGGCCGATGGTGGCCGCCGGCACCAGCAACGACGAGATCCAGGCCGCCCGCGGGATCCGCCCGCTGTTCGACGAC GAGACCGAAGGGCACGCCTG
Downstream 100 bases:
>100_bases GTTTTCAGCTGCAACGAGAAGGAGATAGTGAAGTGGCTAACCCGTCCGGGGAGACATTGCCGATGTTCTACGACGACGAT GCGGACCTGACCATCATCCA
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITKQLNKLINVIKIVELE DGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTIEATGDRGKIEALLRVLEPFGIREIVQSGVVSLSRG PRGIGTAK
Sequences:
>Translated_168_residues MSPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITKQLNKLINVIKIVELE DGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTIEATGDRGKIEALLRVLEPFGIREIVQSGVVSLSRG PRGIGTAK >Mature_167_residues SPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITKQLNKLINVIKIVELED GNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTIEATGDRGKIEALLRVLEPFGIREIVQSGVVSLSRGP RGIGTAK
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=156, Percent_Identity=44.8717948717949, Blast_Score=132, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319837, Length=210, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18156; Mature: 18025
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPL CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCEEEEEEECCCCCH EQITKQLNKLINVIKIVELEDGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSP HHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHEEECCC EALTIEATGDRGKIEALLRVLEPFGIREIVQSGVVSLSRGPRGIGTAK CEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHECCCCCCCCCCCC >Mature Secondary Structure SPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPL CCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCEEEEEEECCCCCH EQITKQLNKLINVIKIVELEDGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSP HHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHEEECCC EALTIEATGDRGKIEALLRVLEPFGIREIVQSGVVSLSRGPRGIGTAK CEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]