| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ilvC
Identifier: 41409134
GI number: 41409134
Start: 3377462
End: 3378493
Strand: Reverse
Name: ilvC
Synonym: MAP3036c
Alternate gene names: 41409134
Gene position: 3378493-3377462 (Counterclockwise)
Preceding gene: 41409135
Following gene: 41409131
Centisome position: 69.95
GC content: 66.18
Gene sequence:
>1032_bases GTGGCTAACCCGTCCGGGGAGACATTGCCGATGTTCTACGACGACGATGCGGACCTGACCATCATCCAGGGTCGCAAGGT CGGCGTCATCGGATACGGCAGCCAGGGGCATGCGCACTCGCTGAGCCTGCGCGACTCCGGCGTGCAGGTGAAGGTGGGCC TGAAGGAGGGTTCGAAGTCGCGCGCCAAGGTTTCCGAGCAGGGCCTCGACGTCGACACCCCGGCCGCGGTGGCCAAGTGG GCCGACGTCATCATGCTGCTGGCCCCCGACACCGCGCAGGCCGACATCTTCAAGAACGACATCGAGCCGAACCTGTCGGA CGGCGACGCATTGTTTTTCGGTCACGGGCTCAACATCCACTTCGGCCTGATCAAGCCGCCCGCCGAGGTCACCGTCGCGA TGGTCGCCCCCAAGGGGCCCGGCCACCTGGTGCGCCGCCAGTTCGTCGACGGCAAGGGTGTGCCCTGCCTGATCGCCGTC GACCAGGACCCGACCGGCAAGGGTGAGGCGCTGGCGCTGTCCTACGCCAAGGCCATCGGCGGCACCCGGGCCGGCGTCAT CAAGACCACCTTCAAGGACGAGACCGAGACCGACCTGTTCGGTGAGCAGGCCGTGTTGTGCGGTGGCACAGAGGAATTGG TGAAGGCCGGTTTCGACGTGATGGTCGAGGCGGGCTACCCGCCGGAGATGGCGTACTTCGAGGTGCTGCACGAGCTCAAG CTGATCGTCGACCTGATGTACGAGGGCGGCATCGCGCGGATGAACTACTCGGTGTCCGACACCGCGGAGTTCGGTGGCTA TCTGTCCGGGCCCCGCGTCATCGACGCCGGGACCAAGGACCGGATGCGGGAGATCCTGCGCGACATTCAGAACGGCGACT TCGTCAAGAAGCTGGTCGCCAACGTCGAGGGCGGCAACAAGCAACTCGAGCAGCTGCGCAAGGAGAACGCCGAGCACCCG ATCGAGGTGGTCGGCAAGCGGCTGCGCGACCTGATGAGCTGGGTCGACCGGCCGATCACCGAGACGGCCTAG
Upstream 100 bases:
>100_bases GTGAGATCGTCCAATCGGGAGTGGTGTCGCTGTCCCGCGGTCCGCGCGGAATCGGCACGGCCAAGTAAGTTTTCAGCTGC AACGAGAAGGAGATAGTGAA
Downstream 100 bases:
>100_bases CGCTTTCGTCGACCGTCACGCTGGCGTGACACTCGGTCACCGGTGTCACGCTGGCGTGACGTTCGTCAGCTAGGAAGCCA GCCGTCCCGCCGTCTCGACC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MANPSGETLPMFYDDDADLTIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVKVGLKEGSKSRAKVSEQGLDVDTPAAVAKW ADVIMLLAPDTAQADIFKNDIEPNLSDGDALFFGHGLNIHFGLIKPPAEVTVAMVAPKGPGHLVRRQFVDGKGVPCLIAV DQDPTGKGEALALSYAKAIGGTRAGVIKTTFKDETETDLFGEQAVLCGGTEELVKAGFDVMVEAGYPPEMAYFEVLHELK LIVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDAGTKDRMREILRDIQNGDFVKKLVANVEGGNKQLEQLRKENAEHP IEVVGKRLRDLMSWVDRPITETA
Sequences:
>Translated_343_residues MANPSGETLPMFYDDDADLTIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVKVGLKEGSKSRAKVSEQGLDVDTPAAVAKW ADVIMLLAPDTAQADIFKNDIEPNLSDGDALFFGHGLNIHFGLIKPPAEVTVAMVAPKGPGHLVRRQFVDGKGVPCLIAV DQDPTGKGEALALSYAKAIGGTRAGVIKTTFKDETETDLFGEQAVLCGGTEELVKAGFDVMVEAGYPPEMAYFEVLHELK LIVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDAGTKDRMREILRDIQNGDFVKKLVANVEGGNKQLEQLRKENAEHP IEVVGKRLRDLMSWVDRPITETA >Mature_342_residues ANPSGETLPMFYDDDADLTIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVKVGLKEGSKSRAKVSEQGLDVDTPAAVAKWA DVIMLLAPDTAQADIFKNDIEPNLSDGDALFFGHGLNIHFGLIKPPAEVTVAMVAPKGPGHLVRRQFVDGKGVPCLIAVD QDPTGKGEALALSYAKAIGGTRAGVIKTTFKDETETDLFGEQAVLCGGTEELVKAGFDVMVEAGYPPEMAYFEVLHELKL IVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDAGTKDRMREILRDIQNGDFVKKLVANVEGGNKQLEQLRKENAEHPI EVVGKRLRDLMSWVDRPITETA
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=336, Percent_Identity=33.9285714285714, Blast_Score=154, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323387, Length=305, Percent_Identity=32.4590163934426, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 37013; Mature: 36881
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPSGETLPMFYDDDADLTIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVKVGLKEGSKS CCCCCCCEEEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCH RAKVSEQGLDVDTPAAVAKWADVIMLLAPDTAQADIFKNDIEPNLSDGDALFFGHGLNIH HHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEE FGLIKPPAEVTVAMVAPKGPGHLVRRQFVDGKGVPCLIAVDQDPTGKGEALALSYAKAIG EEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHC GTRAGVIKTTFKDETETDLFGEQAVLCGGTEELVKAGFDVMVEAGYPPEMAYFEVLHELK CCCCCEEEEECCCCCCHHHCCCCEEEECCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH LIVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDAGTKDRMREILRDIQNGDFVKKLVA HHHHHHHCCCEEEEECCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHH NVEGGNKQLEQLRKENAEHPIEVVGKRLRDLMSWVDRPITETA HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ANPSGETLPMFYDDDADLTIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVKVGLKEGSKS CCCCCCEEEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCH RAKVSEQGLDVDTPAAVAKWADVIMLLAPDTAQADIFKNDIEPNLSDGDALFFGHGLNIH HHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEE FGLIKPPAEVTVAMVAPKGPGHLVRRQFVDGKGVPCLIAVDQDPTGKGEALALSYAKAIG EEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHC GTRAGVIKTTFKDETETDLFGEQAVLCGGTEELVKAGFDVMVEAGYPPEMAYFEVLHELK CCCCCEEEEECCCCCCHHHCCCCEEEECCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH LIVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDAGTKDRMREILRDIQNGDFVKKLVA HHHHHHHCCCEEEEECCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHH NVEGGNKQLEQLRKENAEHPIEVVGKRLRDLMSWVDRPITETA HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA