| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ilvB_1
Identifier: 41409136
GI number: 41409136
Start: 3379032
End: 3380900
Strand: Reverse
Name: ilvB_1
Synonym: MAP3038c
Alternate gene names: 41409136
Gene position: 3380900-3379032 (Counterclockwise)
Preceding gene: 41409137
Following gene: 41409135
Centisome position: 70.0
GC content: 69.5
Gene sequence:
>1869_bases GTGAGCGCTCCCACCAGGCGGCCCGCCCCCGACGCACCCGGCGCTGCCGGCATCGCCCCGGCCCCGCCGGCCCCGGCCGC GAAGCCCGCCGCCGGCAAACCGAAACGCATTGGGCCCGAACAAGTTACCGGCGCGCAATCGGTGATCCGATCGCTGGAGG AGCTCGGCGTCGAGGTGATCTTCGGCATTCCCGGCGGCGCGGTACTGCCGGTCTATGACCCGCTGTTCGACTCCAAGAAG CTGCGGCACGTGCTGGTCCGCCACGAGCAGGGCGCCGGTCACGCCGCCAGCGGCTACGCGCACGCCACCGGCAAGGTCGG TGTCTGCATGGCCACCTCCGGTCCGGGCGCCACCAACCTGGTCACCGCGCTGGCCGACGCCCAGATGGACTCGATTCCCG TCGTCGCCGTCACCGGCCAGGTGGGACGCACGCTAATCGGCACCGACGCCTTCCAGGAGGCCGACATCTCCGGCATCACC ATGCCGATCACCAAGCACAACTTCCTGGTTCGCTCCGGCAACGAGATCCCGCAGGTGCTTGCCGAGGCGTTCCACATCGC CGCCTCCGGCCGCCCCGGCGCGGTGCTCGTCGACATCCCCAAGGACGTGCTGCAGGGCCAGTGCACGTTCAGCTGGCCGC CGCGCATCCACCTGCCCGGGTACAAGCCGACCACCAAACCGCACAGCCGGCAGATCCGCGAAGCCGCCAAGCTGATCGCG GCCGCCCGCAAACCGGTGCTGTACGTGGGCGGCGGTGTCATCCGCGGGGAGGCCAGCGAGCAGCTGCGCGAACTGGCCGA GCTGACCGGCATCCCGGTGGTGACCACGCTGATGGCCCGCGGCGCGTTCCCGGACAGCCACCGTCAGCACCTGGGCATGC CCGGGATGCACGGCACCGTCGCGGCGGTGGCGGCCCTGCAGCGCAGCGACCTGCTGATCGCGCTGGGTACGCGGTTCGAT GACCGGGTGACCGGCAAGCTGGACACCTTCGCCCCGGAAGCCAAGGTCATCCACGCCGACATCGACCCGGCCGAGATCGG CAAGAACCGGCATGCCGACGTGCCGATCGTCGGCGACGTCAAGGCCGTCATCGCCGAACTGGTCGAGATGCTGCGCCACG ACGGGGCGCCCGGCAATCTCGACATCGCCGACTGGTGGGCCTACCTCGACGACGTCCAGTCCACCTATCCGTTGAGCTAC GGGCCGCAGAGCGACGGCAGCCTCGGGCCCGAGTACGTCATCGAGAAGCTGGGCCAGATCGCTGGCCCCGACGCGGTGTA CGTCGCCGGGGTGGGCCAGCACCAGATGTGGGCGGCGCAATTCATCTCCTACGAGAAGCCGCGCACCTGGCTCAACTCCG GCGGCCTGGGCACCATGGGGTTCGCCATTCCGGCCGCCATGGGGGCCAAGATGGCTCGCCCGGAGGCCGAGGTGTGGGCG ATCGACGGCGACGGCTGTTTCCAGATGACCAACCAGGAACTGGCCACCTGCGCCGTCGAGGGCATTCCGATCAAGGTGGC GCTGATCAACAACGGCAACCTGGGCATGGTGCGCCAGTGGCAGACCCTGTTCTACGAAGAGCGGTATTCGCAAACGGATC TGGCCACCCACTCGCACCGCATCCCGGACTTCGTCAAGCTCGCCGAGGCGCTGGGCTGCGTCGGATTGCGTTGCGAGCGT GAGGAAGACGTCGTCGACGTGATCAACGCTGCCCGGGCGATCAACGACCGGCCGGTGGTGATCGACTTCATCGTCGGCGC CGACGCGCAGGTGTGGCCGATGGTGGCCGCCGGCACCAGCAACGACGAGATCCAGGCCGCCCGCGGGATCCGCCCGCTGT TCGACGACGAGACCGAAGGGCACGCCTGA
Upstream 100 bases:
>100_bases AAGCAATCCAGCACCAACGCGCAACCCTCGTGCAGCACAAGCTGTCGGGGGTTTTTTGTTGCCCCGCGAGACTCCCAGAG TGAATAAGGACTGATCGACA
Downstream 100 bases:
>100_bases TGAGTCCGCAGACGCACACGCTGTCGGTGCTGGTCGAAGACAAACCGGGTGTGCTCGCCCGGGTGGCGGCGCTGTTCAGC CGGCGCGGTTTCAACATCGA
Product: acetolactate synthase 1 catalytic subunit
Products: NA
Alternate protein names: ALS; Acetohydroxy-acid synthase [H]
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSAPTRRPAPDAPGAAGIAPAPPAPAAKPAAGKPKRIGPEQVTGAQSVIRSLEELGVEVIFGIPGGAVLPVYDPLFDSKK LRHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNLVTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGIT MPITKHNFLVRSGNEIPQVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPHSRQIREAAKLIA AARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSHRQHLGMPGMHGTVAAVAALQRSDLLIALGTRFD DRVTGKLDTFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVIAELVEMLRHDGAPGNLDIADWWAYLDDVQSTYPLSY GPQSDGSLGPEYVIEKLGQIAGPDAVYVAGVGQHQMWAAQFISYEKPRTWLNSGGLGTMGFAIPAAMGAKMARPEAEVWA IDGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSHRIPDFVKLAEALGCVGLRCER EEDVVDVINAARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDETEGHA
Sequences:
>Translated_622_residues MSAPTRRPAPDAPGAAGIAPAPPAPAAKPAAGKPKRIGPEQVTGAQSVIRSLEELGVEVIFGIPGGAVLPVYDPLFDSKK LRHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNLVTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGIT MPITKHNFLVRSGNEIPQVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPHSRQIREAAKLIA AARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSHRQHLGMPGMHGTVAAVAALQRSDLLIALGTRFD DRVTGKLDTFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVIAELVEMLRHDGAPGNLDIADWWAYLDDVQSTYPLSY GPQSDGSLGPEYVIEKLGQIAGPDAVYVAGVGQHQMWAAQFISYEKPRTWLNSGGLGTMGFAIPAAMGAKMARPEAEVWA IDGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSHRIPDFVKLAEALGCVGLRCER EEDVVDVINAARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDETEGHA >Mature_621_residues SAPTRRPAPDAPGAAGIAPAPPAPAAKPAAGKPKRIGPEQVTGAQSVIRSLEELGVEVIFGIPGGAVLPVYDPLFDSKKL RHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNLVTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGITM PITKHNFLVRSGNEIPQVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPHSRQIREAAKLIAA ARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSHRQHLGMPGMHGTVAAVAALQRSDLLIALGTRFDD RVTGKLDTFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVIAELVEMLRHDGAPGNLDIADWWAYLDDVQSTYPLSYG PQSDGSLGPEYVIEKLGQIAGPDAVYVAGVGQHQMWAAQFISYEKPRTWLNSGGLGTMGFAIPAAMGAKMARPEAEVWAI DGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSHRIPDFVKLAEALGCVGLRCERE EDVVDVINAARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDETEGHA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=571, Percent_Identity=28.0210157618214, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI21361361, Length=593, Percent_Identity=27.6559865092749, Blast_Score=167, Evalue=2e-41, Organism=Escherichia coli, GI87081685, Length=579, Percent_Identity=46.9775474956822, Blast_Score=529, Evalue=1e-151, Organism=Escherichia coli, GI1790104, Length=569, Percent_Identity=44.8154657293497, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786717, Length=545, Percent_Identity=37.7981651376147, Blast_Score=343, Evalue=2e-95, Organism=Escherichia coli, GI1787096, Length=562, Percent_Identity=29.3594306049822, Blast_Score=209, Evalue=6e-55, Organism=Escherichia coli, GI1788716, Length=557, Percent_Identity=25.8527827648115, Blast_Score=163, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17531301, Length=564, Percent_Identity=25.709219858156, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17531299, Length=573, Percent_Identity=25.8289703315881, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17542570, Length=524, Percent_Identity=28.8167938931298, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=611, Percent_Identity=42.8805237315876, Blast_Score=451, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6320816, Length=488, Percent_Identity=23.7704918032787, Blast_Score=110, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6323163, Length=502, Percent_Identity=21.7131474103586, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323073, Length=498, Percent_Identity=21.8875502008032, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321524, Length=501, Percent_Identity=21.3572854291417, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922626, Length=564, Percent_Identity=27.1276595744681, Blast_Score=192, Evalue=5e-49,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65975; Mature: 65844
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTRRPAPDAPGAAGIAPAPPAPAAKPAAGKPKRIGPEQVTGAQSVIRSLEELGVEVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE FGIPGGAVLPVYDPLFDSKKLRHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNL EECCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEECCCCCHHHH VTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGITMPITKHNFLVRSGNEIPQVL HHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHCCCCCEEEEEECCCEEEECCCHHHHHH AEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPHSRQIREAAKLIA HHHHHHHCCCCCCEEEEECCHHHHCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH AARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSHRQHLGMPGMHGTV HHCCCEEEECCEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHH AAVAALQRSDLLIALGTRFDDRVTGKLDTFAPEAKVIHADIDPAEIGKNRHADVPIVGDV HHHHHHHHCCEEEEECCCCCCCCCCCHHCCCCCCEEEEECCCHHHCCCCCCCCCCEECCH KAVIAELVEMLRHDGAPGNLDIADWWAYLDDVQSTYPLSYGPQSDGSLGPEYVIEKLGQI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGPDAVYVAGVGQHQMWAAQFISYEKPRTWLNSGGLGTMGFAIPAAMGAKMARPEAEVWA CCCCEEEEEECCCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEE IDGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSHR ECCCCCEEECCHHHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCC IPDFVKLAEALGCVGLRCEREEDVVDVINAARAINDRPVVIDFIVGADAQVWPMVAAGTS CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCC NDEIQAARGIRPLFDDETEGHA CCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAPTRRPAPDAPGAAGIAPAPPAPAAKPAAGKPKRIGPEQVTGAQSVIRSLEELGVEVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE FGIPGGAVLPVYDPLFDSKKLRHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNL EECCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEECCCCCHHHH VTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGITMPITKHNFLVRSGNEIPQVL HHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHCCCCCEEEEEECCCEEEECCCHHHHHH AEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPHSRQIREAAKLIA HHHHHHHCCCCCCEEEEECCHHHHCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH AARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSHRQHLGMPGMHGTV HHCCCEEEECCEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHH AAVAALQRSDLLIALGTRFDDRVTGKLDTFAPEAKVIHADIDPAEIGKNRHADVPIVGDV HHHHHHHHCCEEEEECCCCCCCCCCCHHCCCCCCEEEEECCCHHHCCCCCCCCCCEECCH KAVIAELVEMLRHDGAPGNLDIADWWAYLDDVQSTYPLSYGPQSDGSLGPEYVIEKLGQI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGPDAVYVAGVGQHQMWAAQFISYEKPRTWLNSGGLGTMGFAIPAAMGAKMARPEAEVWA CCCCEEEEEECCCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEE IDGDGCFQMTNQELATCAVEGIPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSHR ECCCCCEEECCHHHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCC IPDFVKLAEALGCVGLRCEREEDVVDVINAARAINDRPVVIDFIVGADAQVWPMVAAGTS CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCC NDEIQAARGIRPLFDDETEGHA CCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921849 [H]