Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409112

Identifier: 41409112

GI number: 41409112

Start: 3353199

End: 3354632

Strand: Direct

Name: 41409112

Synonym: MAP3014

Alternate gene names: NA

Gene position: 3353199-3354632 (Clockwise)

Preceding gene: 41409105

Following gene: 41409113

Centisome position: 69.43

GC content: 67.85

Gene sequence:

>1434_bases
GTGCTTCGAGAGCCGGACCATGTTCGTCGACCAGGTCGGCGACGTCAGCCACCATCTGAAGTTCTGACCAGGGTGGACCC
CTTCGACCCGGACGCCGTGCTGGCCGACTACGGGCTGCGGCCCGAGCAGGTGAACGAGCTATTACCTTGTACCGCAAGCG
TTTTGGTGAATATATTGGAGGAACAGCCGATGCCTGAGCACCCGGTCGCGACCCGCTCCCAGCACGAGCAGGAACTGGCC
GCGCTCGATTTGATCGAGCACCCGACCGTCAGGGCCGCCTACCGGTCGGTGGCGCAGACCTGGCTGGGCCGCGCCGACGC
GTCGGACGCGATGCGCGCACGGTTCGACGACGCGTTCGCCGAGGTGATGTTCTCGGCGGCGATCTGGTCGTCCAATCAGG
ACAAGCTGCGGCCGAAGGTCAGCTGCATCACCCGGCTGGCGCACCCCGTGGACGGCCGCCGGGTTCCCGGATCACGTTGG
GGCATCGACAATCCCGACAGCGTGTACCGGGTAATCCCGATCTCCGGTGAGGAGCGCTACGAGATCCACGGGTGGGTCGG
CGAACACCGAATGACCGAGAACTACTTCACCCTGTGGGACGCCCGGATGGGCACCATCGACGTGCTCAACGGCCGCACCA
TGCGGGTCGAGCCGGACGGCAGCTTCACCATCACCGTGGACGCGCAACCCGCCAACGGCCGCCCCAATCATGTGCGGACG
TCGGCTGCGGCGCACGAGTTCTACATCCGCGACGTGCTGCTGGACCGGGACCGCGACGACCCCAATTACTTCGAGGTGCA
ACGGCTCGGCGGCCCGCCGGCGACACCGGCGCGCACCCTCGACGAGCAGGCCGAGGCGACCGCGGCGATGATGGCCTACT
TCGCCGATTTCACCGGCAAGCTCAGCCATGGCGTGTACAAGATGCCGGCCAACCGTTTCGATCTGGCCTGGTCGGCGGAG
AAGGCCGGCGCGATGCGCAACCAGGTGTACGTGATGGGCCGCTTCGACCTCGCACCGGACGAGGCGTTCGTCGTCGAGGT
GAATGATGGTGGCGCGGAATACTTCACGGTGCCGCTGAGCAACATCTGGGGCACCACCCTGGACATCGTCGACCGCACCG
GCAGCCTCAACAAGGCGCAGTCGGTCGCCAACGAGGACGGCAGCTACACCTACGTGATCGCGCCCACCGATCCGGGCGTG
GCCAACTGGATCGACTCCGACGGCCTGCGCGAGGCCATCCTGACGCTGCGGATGGCCGAGTTCGGCGAGCACGGCCCCCG
CGAAGACCTCGGCGCCCGCGGCCGCGTCGTCAAGCTGGACCGGCTCGACACCGAGGTGGCGCACCTGCCGCGGGTGAGCC
CGCAGCAGCGGGCCGCCGAACTCGCGCAGCGCCGGGCCGGCTATCTGCGCCGCCTACCCGAAGGGACGATCTAG

Upstream 100 bases:

>100_bases
CCTCCTACTACTGCGTCACCCAGGCCACGCCCGAGCTGCCGCTGCAGGTCATCGTCACCGGGCATTACCAGGACACGTTC
CACCGGGTGAACGGCGCCTG

Downstream 100 bases:

>100_bases
CGATGGCACGCTGGCTGATCACGGGATGCTCCACCGGCTTCGGCCGCGAAATCGCCGGTGCGGCACTGCAAGCCGGCCAC
CGCGTGGTGGTGACGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MLREPDHVRRPGRRRQPPSEVLTRVDPFDPDAVLADYGLRPEQVNELLPCTASVLVNILEEQPMPEHPVATRSQHEQELA
ALDLIEHPTVRAAYRSVAQTWLGRADASDAMRARFDDAFAEVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRW
GIDNPDSVYRVIPISGEERYEIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRT
SAAAHEFYIRDVLLDRDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMAYFADFTGKLSHGVYKMPANRFDLAWSAE
KAGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLSNIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGV
ANWIDSDGLREAILTLRMAEFGEHGPREDLGARGRVVKLDRLDTEVAHLPRVSPQQRAAELAQRRAGYLRRLPEGTI

Sequences:

>Translated_477_residues
MLREPDHVRRPGRRRQPPSEVLTRVDPFDPDAVLADYGLRPEQVNELLPCTASVLVNILEEQPMPEHPVATRSQHEQELA
ALDLIEHPTVRAAYRSVAQTWLGRADASDAMRARFDDAFAEVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRW
GIDNPDSVYRVIPISGEERYEIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRT
SAAAHEFYIRDVLLDRDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMAYFADFTGKLSHGVYKMPANRFDLAWSAE
KAGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLSNIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGV
ANWIDSDGLREAILTLRMAEFGEHGPREDLGARGRVVKLDRLDTEVAHLPRVSPQQRAAELAQRRAGYLRRLPEGTI
>Mature_477_residues
MLREPDHVRRPGRRRQPPSEVLTRVDPFDPDAVLADYGLRPEQVNELLPCTASVLVNILEEQPMPEHPVATRSQHEQELA
ALDLIEHPTVRAAYRSVAQTWLGRADASDAMRARFDDAFAEVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRW
GIDNPDSVYRVIPISGEERYEIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRT
SAAAHEFYIRDVLLDRDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMAYFADFTGKLSHGVYKMPANRFDLAWSAE
KAGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLSNIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGV
ANWIDSDGLREAILTLRMAEFGEHGPREDLGARGRVVKLDRLDTEVAHLPRVSPQQRAAELAQRRAGYLRRLPEGTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53369; Mature: 53369

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREPDHVRRPGRRRQPPSEVLTRVDPFDPDAVLADYGLRPEQVNELLPCTASVLVNILE
CCCCCCHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHH
EQPMPEHPVATRSQHEQELAALDLIEHPTVRAAYRSVAQTWLGRADASDAMRARFDDAFA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRWGIDNPDSVYRVIPISGEERY
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCE
EIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRT
EEEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCEEH
SAAAHEFYIRDVLLDRDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMAYFADFTGK
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSHGVYKMPANRFDLAWSAEKAGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLS
HCCCEEECCCCCCCEEECHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEHH
NIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGVANWIDSDGLREAILTLRMAE
HHCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHH
FGEHGPREDLGARGRVVKLDRLDTEVAHLPRVSPQQRAAELAQRRAGYLRRLPEGTI
HCCCCCCHHHCCCCCEEEEHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLREPDHVRRPGRRRQPPSEVLTRVDPFDPDAVLADYGLRPEQVNELLPCTASVLVNILE
CCCCCCHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHH
EQPMPEHPVATRSQHEQELAALDLIEHPTVRAAYRSVAQTWLGRADASDAMRARFDDAFA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRWGIDNPDSVYRVIPISGEERY
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCE
EIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRT
EEEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCEEH
SAAAHEFYIRDVLLDRDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMAYFADFTGK
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSHGVYKMPANRFDLAWSAEKAGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLS
HCCCEEECCCCCCCEEECHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEHH
NIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGVANWIDSDGLREAILTLRMAE
HHCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHH
FGEHGPREDLGARGRVVKLDRLDTEVAHLPRVSPQQRAAELAQRRAGYLRRLPEGTI
HCCCCCCHHHCCCCCEEEEHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA