| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pyrH
Identifier: 41409044
GI number: 41409044
Start: 3280960
End: 3281757
Strand: Reverse
Name: pyrH
Synonym: MAP2946c
Alternate gene names: 41409044
Gene position: 3281757-3280960 (Counterclockwise)
Preceding gene: 41409047
Following gene: 41409043
Centisome position: 67.95
GC content: 68.67
Gene sequence:
>798_bases ATGACGGAGTCCAGGGAGCCCCACGTCGCCGGCTCGGCGGCTCCGAGGCCAGAGCCGGCGAACGGACTGGCTTCCGGCCA GCCGTCGAGCCGGGCCCGGTATTCGCGAGTGCTGCTCAAGCTGGGCGGCGAGATGTTCGGTGGCGGCCAGGTCGGTTTGG ATCCCGACGTCGTCGCACAGGTGGCCCGGCAGATCGCCGAGGTGGTCCGCGGCGGCGTCCAGGTGGCGGTGGTGATCGGC GGCGGCAACTTCTTCCGCGGCGCCCAGCTTCAGCAGCGCGGCATGGAGCGCACCCGTTCGGATTACATGGGCATGCTGGG CACGGTGATGAACAGCCTGGCGCTGCAAGACTTCCTGGAGAAGGAAGGCATCGTCACCCGGGTGCAGACCGCGATCACCA TGGGCCAGGTGGCCGAGCCCTATCTGCCGTTGCGCGCGGTGCGCCACCTGGAGAAGGGGCGGGTGGTGATCTTCGGGGCC GGCATGGGCCTGCCCTACTTCTCCACCGACACCACGGCCGCGCAGCGGGCGCTGGAGATCGGCGCCGAGGTGGTGCTGAT GGCCAAGGCCGTCGACGGCGTGTTCTCCGCGGATCCCCGGCAATATCCCGAGGCCGAGCTGATCACCGCGATCAGCCACC GCGAGGTCATCGACCGCGGGCTGCGCGTGGCCGATGCGACGGCGTTCAGCCTGTGCATGGACAATGGCATGCCGATCCTG GTGTTCAATCTGCTGACCAATGGCAATATCGCCCGCGCGGTCGGCGGTGAGAAGATCGGGACGCTGGTCACCACCTGA
Upstream 100 bases:
>100_bases TGCACCCCGGCGAGGCCGCGTTGTGCTGCGATGAGGCAGGATGTGAAATGCCGTTCCGGAGAGACTCGTCCCGGGATGGC ACTCTCATGCGAGGAGTCTG
Downstream 100 bases:
>100_bases GGAGGAGCGGCGCAGATGATTGACGAGGCTCTCTTCGACGCGGAAGAGAAGATGGAGAAGGCCGTAGCGGTTGCCCGTGA CGACTTGTCGACCATCCGGA
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTESREPHVAGSAAPRPEPANGLASGQPSSRARYSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIG GGNFFRGAQLQQRGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGA GMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVFSADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPIL VFNLLTNGNIARAVGGEKIGTLVTT
Sequences:
>Translated_265_residues MTESREPHVAGSAAPRPEPANGLASGQPSSRARYSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIG GGNFFRGAQLQQRGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGA GMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVFSADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPIL VFNLLTNGNIARAVGGEKIGTLVTT >Mature_264_residues TESREPHVAGSAAPRPEPANGLASGQPSSRARYSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIGG GNFFRGAQLQQRGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAG MGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVFSADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPILV FNLLTNGNIARAVGGEKIGTLVTT
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=237, Percent_Identity=45.1476793248945, Blast_Score=204, Evalue=7e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 28140; Mature: 28009
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESREPHVAGSAAPRPEPANGLASGQPSSRARYSRVLLKLGGEMFGGGQVGLDPDVVAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGMERTRSDYMGMLGTVMNSLALQDFLE HHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEI HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH GAEVVLMAKAVDGVFSADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPIL CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE VFNLLTNGNIARAVGGEKIGTLVTT EEEECCCCCEEECCCCCCCCCEECC >Mature Secondary Structure TESREPHVAGSAAPRPEPANGLASGQPSSRARYSRVLLKLGGEMFGGGQVGLDPDVVAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGMERTRSDYMGMLGTVMNSLALQDFLE HHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEI HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH GAEVVLMAKAVDGVFSADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPIL CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE VFNLLTNGNIARAVGGEKIGTLVTT EEEECCCCCEEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA