Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408869

Identifier: 41408869

GI number: 41408869

Start: 3102455

End: 3103732

Strand: Reverse

Name: 41408869

Synonym: MAP2771c

Alternate gene names: NA

Gene position: 3103732-3102455 (Counterclockwise)

Preceding gene: 41408870

Following gene: 41408867

Centisome position: 64.26

GC content: 70.27

Gene sequence:

>1278_bases
ATGACCGACGTGGACCCCTACATCATCATCTCCGCGGACACCCACGCCGAGCTGCCGACCGAGCGCTACCGCGAATACGT
CGACCCCGAATACCGGGAGGACTTCGAGACGTATCTGGCGGAGAAGACGGCCGCGGCGCAGGCCGGCGGGTTCATCGACG
AGGAGTTCGCGCAGGAGTGGTTCTCCGAGCACGGCGAGGGCATCGCCGGCGGGTGGGATGTGGCGTTGCGGGACAAGGAA
CTTGACGGCGACGGGGTGGTCGGCGAGGTCATCTTTCCCGACGCCGACGCGGTGACCGGGGTGGCCGGCGCCCCGTTCGG
GGCCGGCCTGGGCCAGTCGGGCGACCTCGACCCGGGCCGGGCGATGGCCGGGGCGCGGGCGCACAACCGCTGGCTGGCCG
AGCTGTGCAGCCATAGTCCCGAGCGGCGGGCCGGGGTCGCGGTGGTGCCGATCCTGGCCGACGTGGACGCGGCGGTCGCC
GAGATCACCCGCGCGGCCGAGTCGGGGTTGCGGGGCGGGATCCTGATCCCGGCGCGCTGGGTCGGCTACCCGCCGTATCA
CGACCGTCGCTACGACAAGGTCTGGGCCGCCTGCCAAGACCTGCAGATGCCGGTGCACACCCATTCCGGTCCCGCGCCGC
AGGAGGAGTACGGGGGCCATCTGGGCATCTATGTCACCGAGGTGCGGTGGTGGGGGGCGCGGCCGCTGTGGTTCGCGTTG
TGGTCGGGCGTGTTCGAGCGTTTCCCGGGCCTGCGCTGGGGGGTGACGGAGTGCGGCGCGTTCTGGGCCAACGATCTGCT
GTGGCTGATGGACACCCGGTATCTGCGTGAGCATTCGGCCAAGAAGATGAGCCATCTGATGGAGGGCGACCTGACCATGC
CGCCCTCGGCGTACTTCGACCGGAACTGTTTCATCGGCGCCACCACCACCGAGCGCAGGGAGCTGGCCCGGCGCTACGAG
ATCGGCGTGTCGAACATCTTGTGGGGCAACGACTTTCCGCACCCGGAAGGAACCTGGCCGCATACCCGCGACTGGCTGCG
GCGCTCGTTCTGGGACATTCCCGTCGAGGAGACCCGCCAGATGCTGGGCTTGGCCGCCGCCGAGCTGTACAACTTCGACC
TGGGCGCGCTGGCCCCGCTGGCCGCGCGCATCGGCCCGGTTCCCGCGGACCTGGGCCAAGACGATGCGGTGAGCATTCCC
AAGTGGGAGGCGGCCCGCCGGACCGGACGGCACTGGCTGACCGACGCGGAGCCCATGCCCGATCTGGTGCAGAGCTGA

Upstream 100 bases:

>100_bases
GGCCGAGGTCGCCGAGCCGCTGGCGGCCGTGCCCGCCGACGCGAGCAGCACCGTCTTCGAGCCCGACCCCATCCGCACCT
GGTAAGCGAAAGGACTCTCA

Downstream 100 bases:

>100_bases
ACGCGGCTCAGGTGTGGACTTTCCAGCCGGCCAGCGGGGTGGGGGCGGCCGGCGCGTCGGGGTCGTTGAACTCGATGTAG
ACATCGCCCTGGCGGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKE
LDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVA
EITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL
WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYE
IGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIP
KWEAARRTGRHWLTDAEPMPDLVQS

Sequences:

>Translated_425_residues
MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKE
LDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVA
EITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL
WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYE
IGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIP
KWEAARRTGRHWLTDAEPMPDLVQS
>Mature_424_residues
TDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKEL
DGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAE
ITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFALW
SGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYEI
GVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPK
WEAARRTGRHWLTDAEPMPDLVQS

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47404; Mature: 47273

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEW
CCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FSEHGEGIAGGWDVALRDKELDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGR
HHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCHHH
AMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGILIPARW
HHHHHHHHHHHHHHHHCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH
VGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHH
WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
RNCFIGATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQ
CCEEEECCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
MLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWEAARRTGRHWLTDAEPMP
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
DLVQS
HHHCC
>Mature Secondary Structure 
TDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEW
CCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FSEHGEGIAGGWDVALRDKELDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGR
HHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCHHH
AMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGILIPARW
HHHHHHHHHHHHHHHHCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH
VGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHH
WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
RNCFIGATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQ
CCEEEECCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
MLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWEAARRTGRHWLTDAEPMP
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
DLVQS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA