| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is bpoB
Identifier: 41408767
GI number: 41408767
Start: 3006162
End: 3007091
Strand: Direct
Name: bpoB
Synonym: MAP2669
Alternate gene names: NA
Gene position: 3006162-3007091 (Clockwise)
Preceding gene: 41408763
Following gene: 41408770
Centisome position: 62.24
GC content: 69.03
Gene sequence:
>930_bases GTGGAAACTCATCGCGTCGTCGGCCCGCGCAAGAGTGCTTATGCCACCTATGTAACGTCAGAACCCATGAGTACCGTCAG CAGCAGTCCCGAGACGGTGGAGTTTGCCGGCGTCGACGGGATCACCCTGGTCGCCGACGAATGGAATCGGGGCTCCGACG GCGCCGGCCGGCCGAGCATCTTGATGCTGCACGGCGGCGGCCAGAACCGGTTTTCCTGGAAGAACACCGGGCAGACGTTG GCCGACGAGGGGCTGCACGTGGTGGCGCTGGATTCCCGGGGGCACGGCGACAGCGATCGCTCGCCGCAGGCCGACTACCA GATCGAGACGCTGACGGCCGACGTGCTGCGGGTGCTGGACGCGATCGGGCGGCCGGTGACGATCATCGGGGCGAGCATGG GCGGGCTGACCGGCATCCTGGCCGCGCACCGGGCCGGGCCGGCGAAGGTGACCCGCCTGGTGCTGGTGGACGTGGTGCCC CGGTTCGAGAAGGACGGCAGCGCCCGCATCCGCGACTTCATGATCAGCGGCCTGGACGGCTTCGACTCGCTGGAGCAGGC CGCCGACGCCGTCGCCGCCTATCTGCCCTACCGCAGCAAGCCGCGCAGCCCCGAGGGGCTGAAGAAGAATCTGAGGCTGC GCGACGGCCGCTGGTACTGGCACTGGGACCCGGCGTTCATGACCAAGCCCGGCGACGATCCCGAACTGCGCACCGAAAGC TTCGAGCAGGCCGCCAAGAACCTGTCGATCCCGGTCCTGCTGATCCGCGGCAAGCTCTCCGATGTGGTGAGCCCCGAGGG GGTCCGGCACTTTTTGGCCACCGTGCCGCGCGCGGAGTTCGTCGAGCTGTCCAACGCCGGGCACACCGCGGCCGGCGACG ACAACGACGCGTTCAGCGACGCCGTGGTGGCGTTCGTCAAGCGCCGCTGA
Upstream 100 bases:
>100_bases CTCCAGGTTGTCGTCGAACCACAAGGACGGGGTGATCGATGGCATGTCCGCGGGCCTCCTCGCCGGCTGGTTGGTTGTGC TGGGGTAGACCCCGGCGGCC
Downstream 100 bases:
>100_bases GAAATCCGCGCGGCTAGTTGGCCGGCTTCTCGGCGTGCCCGCCGAATTGCTTACGCATCGCCGAGAGCGTCTTGTTGGCG AAGTCATCGAGATGCCGGGA
Product: BpoB
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Esterase YbfF; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Hydrolase Or Acyltransferase; Peroxidase BpoA; Peroxidase BpoB; Peroxiredoxin; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase/Acyltransferase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Abhydrolase Domain-Containing Protein; Non-Haem Bromoperoxidase; Hydrolase Of Alpha/Beta Fold Superfamily; Alpha/Beta Fold Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Family Hydrolase; Hydrolases Or Acyltransferases; Non-Heme Peroxidase; Polyketide Synthase; Alpha/Beta Hydrolase Fold Family
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues METHRVVGPRKSAYATYVTSEPMSTVSSSPETVEFAGVDGITLVADEWNRGSDGAGRPSILMLHGGGQNRFSWKNTGQTL ADEGLHVVALDSRGHGDSDRSPQADYQIETLTADVLRVLDAIGRPVTIIGASMGGLTGILAAHRAGPAKVTRLVLVDVVP RFEKDGSARIRDFMISGLDGFDSLEQAADAVAAYLPYRSKPRSPEGLKKNLRLRDGRWYWHWDPAFMTKPGDDPELRTES FEQAAKNLSIPVLLIRGKLSDVVSPEGVRHFLATVPRAEFVELSNAGHTAAGDDNDAFSDAVVAFVKRR
Sequences:
>Translated_309_residues METHRVVGPRKSAYATYVTSEPMSTVSSSPETVEFAGVDGITLVADEWNRGSDGAGRPSILMLHGGGQNRFSWKNTGQTL ADEGLHVVALDSRGHGDSDRSPQADYQIETLTADVLRVLDAIGRPVTIIGASMGGLTGILAAHRAGPAKVTRLVLVDVVP RFEKDGSARIRDFMISGLDGFDSLEQAADAVAAYLPYRSKPRSPEGLKKNLRLRDGRWYWHWDPAFMTKPGDDPELRTES FEQAAKNLSIPVLLIRGKLSDVVSPEGVRHFLATVPRAEFVELSNAGHTAAGDDNDAFSDAVVAFVKRR >Mature_309_residues METHRVVGPRKSAYATYVTSEPMSTVSSSPETVEFAGVDGITLVADEWNRGSDGAGRPSILMLHGGGQNRFSWKNTGQTL ADEGLHVVALDSRGHGDSDRSPQADYQIETLTADVLRVLDAIGRPVTIIGASMGGLTGILAAHRAGPAKVTRLVLVDVVP RFEKDGSARIRDFMISGLDGFDSLEQAADAVAAYLPYRSKPRSPEGLKKNLRLRDGRWYWHWDPAFMTKPGDDPELRTES FEQAAKNLSIPVLLIRGKLSDVVSPEGVRHFLATVPRAEFVELSNAGHTAAGDDNDAFSDAVVAFVKRR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23200012, Length=267, Percent_Identity=28.4644194756554, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI23200008, Length=267, Percent_Identity=28.4644194756554, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI7706645, Length=147, Percent_Identity=31.2925170068027, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33509; Mature: 33509
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METHRVVGPRKSAYATYVTSEPMSTVSSSPETVEFAGVDGITLVADEWNRGSDGAGRPSI CCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEE LMLHGGGQNRFSWKNTGQTLADEGLHVVALDSRGHGDSDRSPQADYQIETLTADVLRVLD EEEECCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHH AIGRPVTIIGASMGGLTGILAAHRAGPAKVTRLVLVDVVPRFEKDGSARIRDFMISGLDG HCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC FDSLEQAADAVAAYLPYRSKPRSPEGLKKNLRLRDGRWYWHWDPAFMTKPGDDPELRTES HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCEEEEEECCEEECCCCCCCCHHHHH FEQAAKNLSIPVLLIRGKLSDVVSPEGVRHFLATVPRAEFVELSNAGHTAAGDDNDAFSD HHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCHHHH AVVAFVKRR HHHHHHHCC >Mature Secondary Structure METHRVVGPRKSAYATYVTSEPMSTVSSSPETVEFAGVDGITLVADEWNRGSDGAGRPSI CCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEE LMLHGGGQNRFSWKNTGQTLADEGLHVVALDSRGHGDSDRSPQADYQIETLTADVLRVLD EEEECCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHH AIGRPVTIIGASMGGLTGILAAHRAGPAKVTRLVLVDVVPRFEKDGSARIRDFMISGLDG HCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC FDSLEQAADAVAAYLPYRSKPRSPEGLKKNLRLRDGRWYWHWDPAFMTKPGDDPELRTES HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCEEEEEECCEEECCCCCCCCHHHHH FEQAAKNLSIPVLLIRGKLSDVVSPEGVRHFLATVPRAEFVELSNAGHTAAGDDNDAFSD HHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCHHHH AVVAFVKRR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA