| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408763
Identifier: 41408763
GI number: 41408763
Start: 3002765
End: 3003370
Strand: Direct
Name: 41408763
Synonym: MAP2665
Alternate gene names: NA
Gene position: 3002765-3003370 (Clockwise)
Preceding gene: 41408762
Following gene: 41408767
Centisome position: 62.17
GC content: 71.29
Gene sequence:
>606_bases GTGACCGAACTGGCTGTGCTGCAAGCGATTCGGCTCAAGGGCCGGGTCAGCCGAGCCGACCTGGCCGCCACCCTGGGCAC GGATCCCGACGAAATCGCCGGCACGGTCGAGCGGCTGAGCGCGGCGGGCCTGGTGACCGGGGACGCCACCCTCTGGATCA CCCCGGCCGGCAGCGCCCGGCTCACGGCGCTGCTCGCCGAGGAACGCCGGGGCATCGACGCCGCCGCGATGGCCGCCGTC TATGACGACTTTCGGGCGATCAACGCCGATTTCAAGCGCCTGGTGACCGACTGGCAGCTCAAGGACGGCGCGCCCAACCG CCACGACGACGCCGAGTACGACGACGCCGTGTTGGCCCGCCTGGACGACGCGCACGCGCGGGTCACGCCGGTCATCGAGG CCGCGGCCGCCCAACTGCCGCGGCTGAACCGCTACGCGGCGAAACTGGCCGCGGCCCTGGACAAGGTGCGGGCCGGCGAC ACGGCGTGGCTGACCAGGCCGCTGATCGACTCCTACCACACGGTGTGGTTCGAACTGCACGAAGAGCTCATCGTCGCCGT CGGCCTGACCAGGCAGGAAGCCGCCAGATCCGGTGACGCGCAATAG
Upstream 100 bases:
>100_bases CCGAGAGCGCCGTGCGCGCGGCCCTGGCCGCCGGGCAGACCGACGTGGTCTCGCCCACCCCGCTGCTGGTCATGCTGACC GCGCTGCGCCAGGGCGCGCC
Downstream 100 bases:
>100_bases TCATAGCGCCGCGTCGAGCAACGCCAGGTAGGCGTCGACGTCGGGAACCGCCGACGCCGCCGCGTGCACGCTGATCGCGA TGGTGTCCCCGATGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTELAVLQAIRLKGRVSRADLAATLGTDPDEIAGTVERLSAAGLVTGDATLWITPAGSARLTALLAEERRGIDAAAMAAV YDDFRAINADFKRLVTDWQLKDGAPNRHDDAEYDDAVLARLDDAHARVTPVIEAAAAQLPRLNRYAAKLAAALDKVRAGD TAWLTRPLIDSYHTVWFELHEELIVAVGLTRQEAARSGDAQ
Sequences:
>Translated_201_residues MTELAVLQAIRLKGRVSRADLAATLGTDPDEIAGTVERLSAAGLVTGDATLWITPAGSARLTALLAEERRGIDAAAMAAV YDDFRAINADFKRLVTDWQLKDGAPNRHDDAEYDDAVLARLDDAHARVTPVIEAAAAQLPRLNRYAAKLAAALDKVRAGD TAWLTRPLIDSYHTVWFELHEELIVAVGLTRQEAARSGDAQ >Mature_200_residues TELAVLQAIRLKGRVSRADLAATLGTDPDEIAGTVERLSAAGLVTGDATLWITPAGSARLTALLAEERRGIDAAAMAAVY DDFRAINADFKRLVTDWQLKDGAPNRHDDAEYDDAVLARLDDAHARVTPVIEAAAAQLPRLNRYAAKLAAALDKVRAGDT AWLTRPLIDSYHTVWFELHEELIVAVGLTRQEAARSGDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21711; Mature: 21579
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELAVLQAIRLKGRVSRADLAATLGTDPDEIAGTVERLSAAGLVTGDATLWITPAGSAR CCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCEEEEEECCCCHH LTALLAEERRGIDAAAMAAVYDDFRAINADFKRLVTDWQLKDGAPNRHDDAEYDDAVLAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LDDAHARVTPVIEAAAAQLPRLNRYAAKLAAALDKVRAGDTAWLTRPLIDSYHTVWFELH HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EELIVAVGLTRQEAARSGDAQ HHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure TELAVLQAIRLKGRVSRADLAATLGTDPDEIAGTVERLSAAGLVTGDATLWITPAGSAR CHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCEEEEEECCCCHH LTALLAEERRGIDAAAMAAVYDDFRAINADFKRLVTDWQLKDGAPNRHDDAEYDDAVLAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LDDAHARVTPVIEAAAAQLPRLNRYAAKLAAALDKVRAGDTAWLTRPLIDSYHTVWFELH HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EELIVAVGLTRQEAARSGDAQ HHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA