| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408578
Identifier: 41408578
GI number: 41408578
Start: 2784135
End: 2784755
Strand: Reverse
Name: 41408578
Synonym: MAP2480c
Alternate gene names: NA
Gene position: 2784755-2784135 (Counterclockwise)
Preceding gene: 41408579
Following gene: 41408575
Centisome position: 57.66
GC content: 72.46
Gene sequence:
>621_bases GTGCTCGGCCCCGATCATCTGAGCACCCTGACCGCGCGGCACCTGTTGGCCAGTCGACAGCAGGCCGCGTTGTCGTCGCT GGCCGAATGGTCGCAGCTGTTCGCCGACGAACAGCGGGTCTGGGGCGCCGACCACGAGAACACCCTGGTGGCCCGCGAGA AGATCGCCGAGAAGCGTTGGGAGATAGGCGATTTCGTCGGCGCGATGGCCGAGGGCGAGCAGGTGCTGGCCGCGCGGCGC CGGGTGCTCGGCGCCGATCACACCGACACCCTGGGCACGCAACTGATGTTGTCGATCTGGCGGGGCCGCGCCGGCGACGT CCCCGCGGCCGTCGCCGAGCTGGAGCCGCTGATCGGTGAGCTGCGCGAGAAGCTGGGAGACGACCACGCGCACGTGCTGA TGGCGCGGCACATGTTCACGCTGTGGGCGCCGGAGCGGGCCGGTGTCACCGACGCGGTCGCGGCATGGGAGGCACTGGTC GAGGAGGAGAGCCGGGTGCTCGGTGACGAGCACCCGGTGACCCTGGCGGCCCGCCAGGAGCTGGCCGGATGGTGCGCCCG GCGCGACGGCCAGGCGGGCGGCGCCGGTGCCCAGGGGTCGCTGGACTGGTCGGCGTCATGA
Upstream 100 bases:
>100_bases CTGGAACTCAAGGTGTCGCTGGCCACCCTGCAGCTGCGGGCGGGCGAGTGCGCGGTGGCCTACGAGGAGTTCGAGCGGTT GATACCCCGACCTCGTCGAG
Downstream 100 bases:
>100_bases CCCGCATCTGCCGTGCCGCGGCCCTCAGGTCGTCGCCTTGTCCGCGGGCCGCTCCTCGTTGGTGGGCTGCTGGGGCGGCT GCCCCTTGCGCAGCGTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS
Sequences:
>Translated_206_residues MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS >Mature_206_residues MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22399; Mature: 22399
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EIGDFVGAMAEGEQVLAARRRVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGE HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALVEEESRVLGDEHPVTLAARQE HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGWCARRDGQAGGAGAQGSLDWSAS HHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EIGDFVGAMAEGEQVLAARRRVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGE HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALVEEESRVLGDEHPVTLAARQE HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGWCARRDGQAGGAGAQGSLDWSAS HHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA