Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408578

Identifier: 41408578

GI number: 41408578

Start: 2784135

End: 2784755

Strand: Reverse

Name: 41408578

Synonym: MAP2480c

Alternate gene names: NA

Gene position: 2784755-2784135 (Counterclockwise)

Preceding gene: 41408579

Following gene: 41408575

Centisome position: 57.66

GC content: 72.46

Gene sequence:

>621_bases
GTGCTCGGCCCCGATCATCTGAGCACCCTGACCGCGCGGCACCTGTTGGCCAGTCGACAGCAGGCCGCGTTGTCGTCGCT
GGCCGAATGGTCGCAGCTGTTCGCCGACGAACAGCGGGTCTGGGGCGCCGACCACGAGAACACCCTGGTGGCCCGCGAGA
AGATCGCCGAGAAGCGTTGGGAGATAGGCGATTTCGTCGGCGCGATGGCCGAGGGCGAGCAGGTGCTGGCCGCGCGGCGC
CGGGTGCTCGGCGCCGATCACACCGACACCCTGGGCACGCAACTGATGTTGTCGATCTGGCGGGGCCGCGCCGGCGACGT
CCCCGCGGCCGTCGCCGAGCTGGAGCCGCTGATCGGTGAGCTGCGCGAGAAGCTGGGAGACGACCACGCGCACGTGCTGA
TGGCGCGGCACATGTTCACGCTGTGGGCGCCGGAGCGGGCCGGTGTCACCGACGCGGTCGCGGCATGGGAGGCACTGGTC
GAGGAGGAGAGCCGGGTGCTCGGTGACGAGCACCCGGTGACCCTGGCGGCCCGCCAGGAGCTGGCCGGATGGTGCGCCCG
GCGCGACGGCCAGGCGGGCGGCGCCGGTGCCCAGGGGTCGCTGGACTGGTCGGCGTCATGA

Upstream 100 bases:

>100_bases
CTGGAACTCAAGGTGTCGCTGGCCACCCTGCAGCTGCGGGCGGGCGAGTGCGCGGTGGCCTACGAGGAGTTCGAGCGGTT
GATACCCCGACCTCGTCGAG

Downstream 100 bases:

>100_bases
CCCGCATCTGCCGTGCCGCGGCCCTCAGGTCGTCGCCTTGTCCGCGGGCCGCTCCTCGTTGGTGGGCTGCTGGGGCGGCT
GCCCCTTGCGCAGCGTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR
RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV
EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS

Sequences:

>Translated_206_residues
MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR
RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV
EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS
>Mature_206_residues
MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRWEIGDFVGAMAEGEQVLAARR
RVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGELREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALV
EEESRVLGDEHPVTLAARQELAGWCARRDGQAGGAGAQGSLDWSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22399; Mature: 22399

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EIGDFVGAMAEGEQVLAARRRVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGE
HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALVEEESRVLGDEHPVTLAARQE
HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LAGWCARRDGQAGGAGAQGSLDWSAS
HHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGPDHLSTLTARHLLASRQQAALSSLAEWSQLFADEQRVWGADHENTLVAREKIAEKRW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EIGDFVGAMAEGEQVLAARRRVLGADHTDTLGTQLMLSIWRGRAGDVPAAVAELEPLIGE
HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LREKLGDDHAHVLMARHMFTLWAPERAGVTDAVAAWEALVEEESRVLGDEHPVTLAARQE
HHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LAGWCARRDGQAGGAGAQGSLDWSAS
HHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA