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The map label for this gene is atpH

Identifier: 41408552

GI number: 41408552

Start: 2760105

End: 2761445

Strand: Reverse

Name: atpH

Synonym: MAP2454c

Alternate gene names: 41408552

Gene position: 2761445-2760105 (Counterclockwise)

Preceding gene: 41408553

Following gene: 41408551

Centisome position: 57.18

GC content: 68.98

Gene sequence:

>1341_bases
ATGTCGACTTTCATCGGCCAGTTGGTGGGCTTTGCGGCCATCGTGTTCCTGGTGGTCCGCTATGTGGTGCCGCCGGTGCG
ACGGTTGATGGCCGCGCGCCAGGAGGCGGTGCGCCAGCAGCTGCAGGACGCGGCCGCCGCGGCCGACCGGTTGACCGAGT
CGACCACCGCGCACAGCAAGGCCGTGGAAGCGGCCAAGGCGGAGTCGAAGCGGGTTGTCGACGAGGCGCAGGCGGACGCC
AAACGCATCACCGAGCAGTTGGCGGCGCAGGCCGGCCTCGAGGCCGAACGCATCAAATCGCAGGGCAGCCGGCAGGTCGA
CCTGCTGCGCACCCAGCTGACCCGTCAGCTGCGGCTGGAACTCGGGCACGAAGCGGTGCGGCAGGCCGGCGAGCTGGTGC
GCAACTATGTCGCCGACCCGGCCCAGCAATCGGCGACCGTGGACCGATTCCTGGACGACCTCGACGCGATGGCGCCCGCG
GCGGCCGACGTCCAGTACCCGCTGATGACCAAGATGCGCTCCTCGAGCCGCGTCGCGCTGGTCAACCTGACGGAGCGATT
CACCACCGTCGCCAAAGATCTTGACAACAAAGCACTTTCCGCCCTGTCCAGCGAACTGGTGTCGGTGGCCCAGATGCTGG
ACCGCGAGATCGTGGTGACGCGGTATCTCACCGTTCCCGCCGAGGATGCGGGCCCCCGGGTCCGGCTGATCGAGCGGTTG
CTGTCCGGCAAGGTCGGCGACGTCACCCTCGAGGTGCTGCGGGCGGCCGTGTCGGAGCGCTGGTCGGCCAACTCCGACCT
GATCGACGCCCTCGAGCACCTGTCGCGGCAGGCGCTGCTCGAAGTCGCCGAGCGCGAGAACAAGGTCGACGAGGTCGAAG
AACAGCTGTTCCGGTTCTCCCGCATCCTGGACGTGCAACCGCGGTTGGCAATCCTGTTGGGCGACTACGCCGTTCCGGTC
GAAGGCCGAGTGGGATTGCTGCGCAAGGTGCTCGACAGCGCCAGCATCACAGTCAACCCGATCGTGGCCGCGCTGCTGAC
CCAGACGGTCGAGCTGCTGCGCGGCCGGCCGGCCGAAGAGGCCGTGCAGTTCCTCGCGGAGGTGGCGGTGGCGCGCCGCG
GCGAGGTCGTCGCCCAGGTCAGCGCGGCAGCCGACCTGAGCGACGCGCAGCGCAGCCGCCTCACCGAAGTGCTCAGCCGC
ATCTACGGCCACCCGGTCTCGGTGCAGCTGCAGATCGACACCGAACTGCTGGGTGGTCTGCTGATCGCCGTGGCTGACGA
AGTGATCGACGGGACGCTCGCGTCCCGTCTGGCCGCCGCAGAGGCCCAGTTGCCCGACTGA

Upstream 100 bases:

>100_bases
TCCATGTCGGCGACCCTGGCCAGCCGAATCCTCGGTGTCGACGTCGCCCCCGCCGCCGCGACCACATCCGCAACCAAGAC
ATCCGGACGGTAATCGAAGT

Downstream 100 bases:

>100_bases
CCGCAGCACCAACCACTGACCATCCCGACACACGCGATACCAAGATCAAGTAGGAAGACGAAAAGCCATGGCCGAGTTGA
CAATCTCCGCTGATGACATT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase subunit b; ATP synthase F(0) sector subunit b 2; ATPase subunit I 2; F-type ATPase subunit b 2; F-ATPase subunit b 2; ATP synthase subunit delta; ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSTFIGQLVGFAAIVFLVVRYVVPPVRRLMAARQEAVRQQLQDAAAAADRLTESTTAHSKAVEAAKAESKRVVDEAQADA
KRITEQLAAQAGLEAERIKSQGSRQVDLLRTQLTRQLRLELGHEAVRQAGELVRNYVADPAQQSATVDRFLDDLDAMAPA
AADVQYPLMTKMRSSSRVALVNLTERFTTVAKDLDNKALSALSSELVSVAQMLDREIVVTRYLTVPAEDAGPRVRLIERL
LSGKVGDVTLEVLRAAVSERWSANSDLIDALEHLSRQALLEVAERENKVDEVEEQLFRFSRILDVQPRLAILLGDYAVPV
EGRVGLLRKVLDSASITVNPIVAALLTQTVELLRGRPAEEAVQFLAEVAVARRGEVVAQVSAAADLSDAQRSRLTEVLSR
IYGHPVSVQLQIDTELLGGLLIAVADEVIDGTLASRLAAAEAQLPD

Sequences:

>Translated_446_residues
MSTFIGQLVGFAAIVFLVVRYVVPPVRRLMAARQEAVRQQLQDAAAAADRLTESTTAHSKAVEAAKAESKRVVDEAQADA
KRITEQLAAQAGLEAERIKSQGSRQVDLLRTQLTRQLRLELGHEAVRQAGELVRNYVADPAQQSATVDRFLDDLDAMAPA
AADVQYPLMTKMRSSSRVALVNLTERFTTVAKDLDNKALSALSSELVSVAQMLDREIVVTRYLTVPAEDAGPRVRLIERL
LSGKVGDVTLEVLRAAVSERWSANSDLIDALEHLSRQALLEVAERENKVDEVEEQLFRFSRILDVQPRLAILLGDYAVPV
EGRVGLLRKVLDSASITVNPIVAALLTQTVELLRGRPAEEAVQFLAEVAVARRGEVVAQVSAAADLSDAQRSRLTEVLSR
IYGHPVSVQLQIDTELLGGLLIAVADEVIDGTLASRLAAAEAQLPD
>Mature_445_residues
STFIGQLVGFAAIVFLVVRYVVPPVRRLMAARQEAVRQQLQDAAAAADRLTESTTAHSKAVEAAKAESKRVVDEAQADAK
RITEQLAAQAGLEAERIKSQGSRQVDLLRTQLTRQLRLELGHEAVRQAGELVRNYVADPAQQSATVDRFLDDLDAMAPAA
ADVQYPLMTKMRSSSRVALVNLTERFTTVAKDLDNKALSALSSELVSVAQMLDREIVVTRYLTVPAEDAGPRVRLIERLL
SGKVGDVTLEVLRAAVSERWSANSDLIDALEHLSRQALLEVAERENKVDEVEEQLFRFSRILDVQPRLAILLGDYAVPVE
GRVGLLRKVLDSASITVNPIVAALLTQTVELLRGRPAEEAVQFLAEVAVARRGEVVAQVSAAADLSDAQRSRLTEVLSRI
YGHPVSVQLQIDTELLGGLLIAVADEVIDGTLASRLAAAEAQLPD

Specific function: This fusion protein includes a component of the F(0) channel (subunit b) and of the F(1) subunit (subunit delta). Two copies of subunit b and one of delta together form the peripheral "stator" stalk which links F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864
- InterPro:   IPR000711 [H]

Pfam domain/function: PF00430 ATP-synt_B; PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 48538; Mature: 48407

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFIGQLVGFAAIVFLVVRYVVPPVRRLMAARQEAVRQQLQDAAAAADRLTESTTAHSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAAKAESKRVVDEAQADAKRITEQLAAQAGLEAERIKSQGSRQVDLLRTQLTRQLRLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
LGHEAVRQAGELVRNYVADPAQQSATVDRFLDDLDAMAPAAADVQYPLMTKMRSSSRVAL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEE
VNLTERFTTVAKDLDNKALSALSSELVSVAQMLDREIVVTRYLTVPAEDAGPRVRLIERL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
LSGKVGDVTLEVLRAAVSERWSANSDLIDALEHLSRQALLEVAERENKVDEVEEQLFRFS
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RILDVQPRLAILLGDYAVPVEGRVGLLRKVLDSASITVNPIVAALLTQTVELLRGRPAEE
HHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH
AVQFLAEVAVARRGEVVAQVSAAADLSDAQRSRLTEVLSRIYGHPVSVQLQIDTELLGGL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
LIAVADEVIDGTLASRLAAAEAQLPD
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STFIGQLVGFAAIVFLVVRYVVPPVRRLMAARQEAVRQQLQDAAAAADRLTESTTAHSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAAKAESKRVVDEAQADAKRITEQLAAQAGLEAERIKSQGSRQVDLLRTQLTRQLRLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
LGHEAVRQAGELVRNYVADPAQQSATVDRFLDDLDAMAPAAADVQYPLMTKMRSSSRVAL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEE
VNLTERFTTVAKDLDNKALSALSSELVSVAQMLDREIVVTRYLTVPAEDAGPRVRLIERL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
LSGKVGDVTLEVLRAAVSERWSANSDLIDALEHLSRQALLEVAERENKVDEVEEQLFRFS
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RILDVQPRLAILLGDYAVPVEGRVGLLRKVLDSASITVNPIVAALLTQTVELLRGRPAEE
HHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH
AVQFLAEVAVARRGEVVAQVSAAADLSDAQRSRLTEVLSRIYGHPVSVQLQIDTELLGGL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
LIAVADEVIDGTLASRLAAAEAQLPD
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA