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The map label for this gene is atpF

Identifier: 41408553

GI number: 41408553

Start: 2761453

End: 2761986

Strand: Reverse

Name: atpF

Synonym: MAP2455c

Alternate gene names: 41408553

Gene position: 2761986-2761453 (Counterclockwise)

Preceding gene: 41408554

Following gene: 41408552

Centisome position: 57.19

GC content: 67.04

Gene sequence:

>534_bases
ATGGGTGACGCGAGCCTGAGCGTGCTGGCATCCAGCCAGGTGGTGGCCGAGGGAGGCAACAACTTCCTCGTACCCAACGG
CACCTTCTTCTTCGTGCTGGCCATCTTCCTGATCGTGCTGGCCGTCATCGGCACCTTCGTGGTGCCGCCGGTGATGAAGG
TGTTGCGCGAGCGCGACGCCATGGTCGCCAAGACGGCCGCCGACAACCGGAAGGCGGCCGAGCAGTTCGAGGCCGCCCAG
GCCGATTACGAAGAAGCCATGACCGAAGCCCGGGTGCAGGCCTCGTCGTTACGCGACAACGCCCGCGCCGAGGGCCGTAA
GGTCGTGGAGGACGCGCGGGCCAAGGCCGAGCAAGAGGTGCTGTCGACGCTGCAGCTGGCCGCCCGGCAGCTGAAGCGGG
AAAGAGACGCCGTGGAACTGGATCTGCGTGCCAATGTCGCGTCCATGTCGGCGACCCTGGCCAGCCGAATCCTCGGTGTC
GACGTCGCCCCCGCCGCCGCGACCACATCCGCAACCAAGACATCCGGACGGTAA

Upstream 100 bases:

>100_bases
CTTCATCACCGTCGGTCTGGTCGAGGCGGCGTACTTCATCAACCTGGCGTTCATGGCGCTGTTCGTCTTCGCCACACCCG
TCGGCACCTAGTTCGCTGTG

Downstream 100 bases:

>100_bases
TCGAAGTATGTCGACTTTCATCGGCCAGTTGGTGGGCTTTGCGGCCATCGTGTTCCTGGTGGTCCGCTATGTGGTGCCGC
CGGTGCGACGGTTGATGGCC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGDASLSVLASSQVVAEGGNNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRERDAMVAKTAADNRKAAEQFEAAQ
ADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQEVLSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGV
DVAPAAATTSATKTSGR

Sequences:

>Translated_177_residues
MGDASLSVLASSQVVAEGGNNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRERDAMVAKTAADNRKAAEQFEAAQ
ADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQEVLSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGV
DVAPAAATTSATKTSGR
>Mature_176_residues
GDASLSVLASSQVVAEGGNNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRERDAMVAKTAADNRKAAEQFEAAQA
DYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQEVLSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGVD
VAPAAATTSATKTSGR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_MYCA1 (A0QCX4)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_880762.1
- STRING:   A0QCX4
- EnsemblBacteria:   EBMYCT00000009323
- GeneID:   4529373
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_1523
- TIGR:   MAV_1523
- eggNOG:   COG0711
- GeneTree:   EBGT00050000016868
- HOGENOM:   HBG565494
- OMA:   LEEYKQQ
- ProtClustDB:   PRK05759
- BioCyc:   MAVI243243:MAV_1523-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18811; Mature: 18679

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x408e3c30)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDASLSVLASSQVVAEGGNNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRERDA
CCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAKTAADNRKAAEQFEAAQADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQEV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGVDVAPAAATTSATKTSGR
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCH
>Mature Secondary Structure 
GDASLSVLASSQVVAEGGNNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRERDA
CCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAKTAADNRKAAEQFEAAQADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQEV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGVDVAPAAATTSATKTSGR
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA