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The map label for this gene is fadE3_1

Identifier: 41408503

GI number: 41408503

Start: 2700888

End: 2702081

Strand: Reverse

Name: fadE3_1

Synonym: MAP2405c

Alternate gene names: 41408503

Gene position: 2702081-2700888 (Counterclockwise)

Preceding gene: 41408504

Following gene: 41408502

Centisome position: 55.95

GC content: 65.75

Gene sequence:

>1194_bases
ATGACCAGACTGGCCCAAACCCTCGGGTTGACCGAATTCCAGACCGAGATCATCGCCACCGTACGGCAATTCGTCGACAA
GGAAGTCATTCCCCACGCCGCGGAACTGGAACGCGCCGACACCTACCCCCAGGACATCGTCGACCAGATGCGCGACATGG
GGCTGTTCGGGCTGATGATCCCGCAGGAGTACGGCGGATTGGGCGAGTCGCTGCTCACCTACGCCCTGTGCGTGGAGGAG
CTGGCCCGCGGCTGGATGAGCGTGTCGGGGGTGCTCAACACCCACTTCATCGTGGCCTACATGCTGCGCCAGCACGGCAC
CGACGAACAGAAGCAGCGCTTCCTGCCGCGGATGGCGGTCGGCGAGACCCGCGGCGCCTTCTCGATGTCGGAGCCGGAGC
TGGGCTCCGATGTGGCCGCGATCCGGACCCGCGCCCGGCGCGATCCGGACGGCGGCTACACCATCGACGGCCAGAAGATG
TGGCTCACCAACGGTGCCACCTCGACGCTGATCGCGGTGCTGGTGCGCACCGACGAGGGCTCGGACAAGCCGCACCGCAA
CCTGACCGCGTTCCTGGTCGAGAAGCCGGTCGGGTTCGGCGAAGTCGTTGCGGGCCTGCGGATTCCGGGGAAGATCGACA
AGCTGGGCTACAAGGGCATCGAAACCACCGAGCTCATCTTCGACGGCTACCGGGCGGCCGCCGACGACATCCTCGGCGGC
ACGCCGGGGCAGGGCTTCTTCCAGATGATGGACGGCATCGAGGTGGGCCGGGTCAACGTCTCGGCCCGCGCGTGCGGTGT
CGCGATCCGCGCCTTCGAGCTGGCGGTGCGCTACGCGCAACAACGCGAGACCTTCGGCAAGCCGATCGCCGAGCACCAGG
CCATCGCGTTCCAGCTGGCCGAGATGGCCACCAAAGTCGAAGCGGCACACCTGATGATGGTCAACGCCGCACGTCTGAAG
GATTCGGGGGAGCGCAACGACGTCGCCGCCGGAATGGCCAAATACCTGGCCAGCGAATACTGCGCCGAAGTGACCCAGCA
GAGTTTCCGGATCCACGGCGGCTACGGCTATTCCAAGGAGTACGAGATCGAGCGGCTGATGCGCGACGCGCCGTTTTTGC
TCATCGGCGAGGGCACCAGCGAGATCCAGAAGAACATCATCAGTAAGCGGCTGCTCGCCGAATACCGGGTGTAG

Upstream 100 bases:

>100_bases
GCCGAGGTCCTCGCGCGGCTGGGGCTCACCGCCGCGGACATCGAGCGGCTGGCCGACGCCAAGACCATCGCCTGCTGAGC
AACCGAAGGGAACGCAGCAC

Downstream 100 bases:

>100_bases
GCAACGATGAGCGTTCCGGATTTCGCGGCCCGACCGCAACTTTCCGACGACGTCGCGCATCTGATCCGCGGCCGGATCTT
CGACGGCAGTTACGCCGCCG

Product: FadE3_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTRLAQTLGLTEFQTEIIATVRQFVDKEVIPHAAELERADTYPQDIVDQMRDMGLFGLMIPQEYGGLGESLLTYALCVEE
LARGWMSVSGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAVGETRGAFSMSEPELGSDVAAIRTRARRDPDGGYTIDGQKM
WLTNGATSTLIAVLVRTDEGSDKPHRNLTAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGG
TPGQGFFQMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVEAAHLMMVNAARLK
DSGERNDVAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKEYEIERLMRDAPFLLIGEGTSEIQKNIISKRLLAEYRV

Sequences:

>Translated_397_residues
MTRLAQTLGLTEFQTEIIATVRQFVDKEVIPHAAELERADTYPQDIVDQMRDMGLFGLMIPQEYGGLGESLLTYALCVEE
LARGWMSVSGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAVGETRGAFSMSEPELGSDVAAIRTRARRDPDGGYTIDGQKM
WLTNGATSTLIAVLVRTDEGSDKPHRNLTAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGG
TPGQGFFQMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVEAAHLMMVNAARLK
DSGERNDVAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKEYEIERLMRDAPFLLIGEGTSEIQKNIISKRLLAEYRV
>Mature_396_residues
TRLAQTLGLTEFQTEIIATVRQFVDKEVIPHAAELERADTYPQDIVDQMRDMGLFGLMIPQEYGGLGESLLTYALCVEEL
ARGWMSVSGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAVGETRGAFSMSEPELGSDVAAIRTRARRDPDGGYTIDGQKMW
LTNGATSTLIAVLVRTDEGSDKPHRNLTAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGGT
PGQGFFQMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVEAAHLMMVNAARLKD
SGERNDVAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKEYEIERLMRDAPFLLIGEGTSEIQKNIISKRLLAEYRV

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=393, Percent_Identity=37.1501272264631, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI4557231, Length=394, Percent_Identity=36.5482233502538, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI187960098, Length=394, Percent_Identity=36.5482233502538, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI4501859, Length=389, Percent_Identity=33.1619537275064, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI7656849, Length=391, Percent_Identity=32.2250639386189, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI226958412, Length=393, Percent_Identity=30.0254452926209, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI4501857, Length=373, Percent_Identity=32.171581769437, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI21361497, Length=382, Percent_Identity=32.9842931937173, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI226958414, Length=356, Percent_Identity=30.6179775280899, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI76496475, Length=384, Percent_Identity=31.7708333333333, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI4557235, Length=384, Percent_Identity=31.7708333333333, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI4503943, Length=391, Percent_Identity=28.9002557544757, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI7669494, Length=367, Percent_Identity=29.4277929155313, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI38505218, Length=398, Percent_Identity=25.6281407035176, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI48976061, Length=397, Percent_Identity=26.1964735516373, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI211971008, Length=397, Percent_Identity=26.1964735516373, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI87081958, Length=393, Percent_Identity=29.0076335877863, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI1786223, Length=397, Percent_Identity=29.2191435768262, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI87082384, Length=287, Percent_Identity=28.2229965156794, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=393, Percent_Identity=34.0966921119593, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=34.7938144329897, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17570075, Length=385, Percent_Identity=34.8051948051948, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17569725, Length=392, Percent_Identity=33.4183673469388, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17506239, Length=388, Percent_Identity=34.020618556701, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17534899, Length=387, Percent_Identity=33.0749354005168, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17533517, Length=388, Percent_Identity=30.9278350515464, Blast_Score=200, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI71985184, Length=390, Percent_Identity=30.2564102564103, Blast_Score=168, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI71990804, Length=304, Percent_Identity=32.8947368421053, Blast_Score=164, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17505929, Length=371, Percent_Identity=29.9191374663073, Blast_Score=144, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17534353, Length=385, Percent_Identity=26.2337662337662, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17551932, Length=375, Percent_Identity=29.3333333333333, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71985192, Length=324, Percent_Identity=30.2469135802469, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32563615, Length=240, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71982178, Length=278, Percent_Identity=25.8992805755396, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17531909, Length=256, Percent_Identity=26.5625, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=108, Percent_Identity=39.8148148148148, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI86563383, Length=268, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=268, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=394, Percent_Identity=22.8426395939086, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356377, Length=395, Percent_Identity=35.4430379746835, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24660351, Length=387, Percent_Identity=35.6589147286822, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24646207, Length=385, Percent_Identity=36.3636363636364, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI21355753, Length=394, Percent_Identity=32.741116751269, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24666513, Length=387, Percent_Identity=30.4909560723514, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI281363737, Length=350, Percent_Identity=30.8571428571429, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=26.6318537859008, Blast_Score=132, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43896; Mature: 43765

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLAQTLGLTEFQTEIIATVRQFVDKEVIPHAAELERADTYPQDIVDQMRDMGLFGLMI
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCHHEEEC
PQEYGGLGESLLTYALCVEELARGWMSVSGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAV
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHC
GETRGAFSMSEPELGSDVAAIRTRARRDPDGGYTIDGQKMWLTNGATSTLIAVLVRTDEG
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCHHHEEEEEEECCCC
SDKPHRNLTAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGG
CCCCCCCCEEHEECCCCCHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
TPGQGFFQMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLA
CCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EMATKVEAAHLMMVNAARLKDSGERNDVAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH
YEIERLMRDAPFLLIGEGTSEIQKNIISKRLLAEYRV
HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLAQTLGLTEFQTEIIATVRQFVDKEVIPHAAELERADTYPQDIVDQMRDMGLFGLMI
CHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCHHEEEC
PQEYGGLGESLLTYALCVEELARGWMSVSGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAV
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHC
GETRGAFSMSEPELGSDVAAIRTRARRDPDGGYTIDGQKMWLTNGATSTLIAVLVRTDEG
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCHHHEEEEEEECCCC
SDKPHRNLTAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGG
CCCCCCCCEEHEECCCCCHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
TPGQGFFQMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLA
CCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EMATKVEAAHLMMVNAARLKDSGERNDVAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH
YEIERLMRDAPFLLIGEGTSEIQKNIISKRLLAEYRV
HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]