| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is accA1
Identifier: 41408411
GI number: 41408411
Start: 2592858
End: 2594873
Strand: Reverse
Name: accA1
Synonym: MAP2313c
Alternate gene names: 41408411
Gene position: 2594873-2592858 (Counterclockwise)
Preceding gene: 41408412
Following gene: 41408410
Centisome position: 53.73
GC content: 71.63
Gene sequence:
>2016_bases GTGTTCGAAACGGTATTGGTGGCCAACCGCGGCGAGATCGCGGTGCGGGTGATCCGCACCCTGCACCGGCTGGGCATCCG GTCGGTCGCCGTCTACAGCGATCCCGACGCCACTGCGCGGCATGTGCTCGAGGCCGACGAAGCGGTGCGGCTGGGGCCGG CCGCGGCGCGGGACAGCTACCTGAACATCGACAAGGTCGTCGAGGCGGCGACGCGCACCGGGGCGCAGGCGATCCATCCC GGGTACGGATTCCTCTCCGAGAACGCCGATTTCGCTGCGGCATGCGAACGGGCCGGGGTGGTGTTCCTCGGCCCGCCGGC ACGGGCGATCCAGGTGATGGGCGACAAGATCACCGCCAAGAACGCCGTCGCCGAATTCGACGTCCCGGTGGTGCCCGGGG TGGCCAAACTGGGGCTGGGCGACGACGAATTGGTGGCCGCCGCCGACGAGATCGGCTACCCGGTGCTGATCAAGCCGTCG GCGGGCGGCGGCGGCAAGGGCATGCGCCTGGTGGAAGAACCGGGCAGGCTGCGCGAGGCGCTGGTGGGCGCGCGGCGCGA GGCCGCCTCGTCGTTCGGCGACGACACGCTGTTTCTGGAACGGTTTATGTTGCGCCCCAGGCACATCGAGGTGCAGATCC TGGCCGACGCGCACGGCAACGTCGTGCATCTCGGCGAACGCGAGTGCAGCCTGCAGCGGCGCCATCAAAAGGTCATCGAG GAGGCGCCGTCGCCGCTGCTCGACCCGGAGACGCGGGCGCGGATCGGGGCGGCCGCCTGCAATACCGCCCGCAGCGTCGA CTACGTCGGCGCCGGCACGGTGGAGTTCATCGTCTCCGCCGATCGGCCCGACGAGTTCTTCTTCATGGAGATGAACACCC GGCTGCAGGTCGAGCATCCGGTCACCGAGGCGGTGACCGGGCTGGACCTGGTGGAATGGCAGCTGCGGGTGGCCGCCGGC GAGAAGCTGGTGTTCGCCCAGGACGACATCGAACTGCGTGGGCACGCGATCGAGGCCCGGGTGTACGCCGAGGATCCGGC GCGGGGCTTCCTGCCCACCGGCGGCCGGGTGCTCGGCGTCTTCGAGCCGTCCGGTGACGGCGTGCGGGTCGACTCGTCGC TGCTGCCCGGCACCGTGGTGGGCAGCGACTACGACCCGATGCTGAGCAAGGTGATCGCCCACGGGGCCGACCGCGACGAG GCGCTGGCCAGACTCGACCGGGCGTTGAGCCACACCGCGATCCTGGGCGTCCAGACCAACGTCGAGTTCCTGCGCTTCCT GCTGGCCGACGAACGGGTACGCGCCGGCGATCTGGACACCGCGCTGCTCGATGCGCGGCTGGCCGACTTCGCGCCGCTGC CCGCACCCGACGACGTGCTCGCCGCGGCCGGGCTGTACCGGCAATCGGCGCTGGCCGCCCGGGCCCGCCGCTTCGCCGGC AACCCCTGGGCGGCGCCGACGGGGTGGCGGGCCGGCGGTAGCCCGGCGCCGGTCCGCACCGACATGCGCACCGCGCTGCG CACCGAGACGGTGTCGGTGTGGGGGCCACCCGAGGCCGCCGAAGTACAGGTCGGTGCCGGCGAAAGGCTTTCGGCCAGCG CGCATCTCGGGCCGGACCGGATCAGTGTGACGCTGGACGGCCGGCGCCGCGACTACCGCTGGGCCGAGGCCGACCGGCAC CTGTGGATCGCCGACGAGCGCGGAACCTGGCACCTGCGCGAGGCCGAACAGACCACCATTCACCGCGCCGCCGGCCCGCA GCGGGCCGAGATCCTCAGCCCGATGCCGGGCAGCGTGATCGCCGTCCAAACCCCTTCGGGCAGCGACGTTTCCGAAGGCG ACGTGGTGGTCGTCGTGGAGGCGATGAAGATGGAGCACTCGCTGGCCGCGCCGGTTTCCGGACGGGTGGAGGTGCTGGTC TGCGTCGGCGACCAGGTGAGCGTGGACCAGGTGCTGGCCCGGGTGGTGCCCGAGGAATCCGACCCGCCGGCCGATTCGAG TAAGGACGAGACATGA
Upstream 100 bases:
>100_bases ACCCGGCCGACACCAGAACCTTTGTCGGGCTTGCTCTTTCGGTGTGCGCGCAGGCTCCGTTGGAGCCCGTCGGCTACGGC GTCTTCCGGATGTGAGTGCA
Downstream 100 bases:
>100_bases CCACATCCCTCACCGCGGGAACGCTGCCCAAGGAATACCAGGACCTGCGCGACACCGTCGCCGAGTTCGCGCGGACCGTC GTCGCCCCCGTGTCAGCCAA
Product: AccA1
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MFETVLVANRGEIAVRVIRTLHRLGIRSVAVYSDPDATARHVLEADEAVRLGPAAARDSYLNIDKVVEAATRTGAQAIHP GYGFLSENADFAAACERAGVVFLGPPARAIQVMGDKITAKNAVAEFDVPVVPGVAKLGLGDDELVAAADEIGYPVLIKPS AGGGGKGMRLVEEPGRLREALVGARREAASSFGDDTLFLERFMLRPRHIEVQILADAHGNVVHLGERECSLQRRHQKVIE EAPSPLLDPETRARIGAAACNTARSVDYVGAGTVEFIVSADRPDEFFFMEMNTRLQVEHPVTEAVTGLDLVEWQLRVAAG EKLVFAQDDIELRGHAIEARVYAEDPARGFLPTGGRVLGVFEPSGDGVRVDSSLLPGTVVGSDYDPMLSKVIAHGADRDE ALARLDRALSHTAILGVQTNVEFLRFLLADERVRAGDLDTALLDARLADFAPLPAPDDVLAAAGLYRQSALAARARRFAG NPWAAPTGWRAGGSPAPVRTDMRTALRTETVSVWGPPEAAEVQVGAGERLSASAHLGPDRISVTLDGRRRDYRWAEADRH LWIADERGTWHLREAEQTTIHRAAGPQRAEILSPMPGSVIAVQTPSGSDVSEGDVVVVVEAMKMEHSLAAPVSGRVEVLV CVGDQVSVDQVLARVVPEESDPPADSSKDET
Sequences:
>Translated_671_residues MFETVLVANRGEIAVRVIRTLHRLGIRSVAVYSDPDATARHVLEADEAVRLGPAAARDSYLNIDKVVEAATRTGAQAIHP GYGFLSENADFAAACERAGVVFLGPPARAIQVMGDKITAKNAVAEFDVPVVPGVAKLGLGDDELVAAADEIGYPVLIKPS AGGGGKGMRLVEEPGRLREALVGARREAASSFGDDTLFLERFMLRPRHIEVQILADAHGNVVHLGERECSLQRRHQKVIE EAPSPLLDPETRARIGAAACNTARSVDYVGAGTVEFIVSADRPDEFFFMEMNTRLQVEHPVTEAVTGLDLVEWQLRVAAG EKLVFAQDDIELRGHAIEARVYAEDPARGFLPTGGRVLGVFEPSGDGVRVDSSLLPGTVVGSDYDPMLSKVIAHGADRDE ALARLDRALSHTAILGVQTNVEFLRFLLADERVRAGDLDTALLDARLADFAPLPAPDDVLAAAGLYRQSALAARARRFAG NPWAAPTGWRAGGSPAPVRTDMRTALRTETVSVWGPPEAAEVQVGAGERLSASAHLGPDRISVTLDGRRRDYRWAEADRH LWIADERGTWHLREAEQTTIHRAAGPQRAEILSPMPGSVIAVQTPSGSDVSEGDVVVVVEAMKMEHSLAAPVSGRVEVLV CVGDQVSVDQVLARVVPEESDPPADSSKDET >Mature_671_residues MFETVLVANRGEIAVRVIRTLHRLGIRSVAVYSDPDATARHVLEADEAVRLGPAAARDSYLNIDKVVEAATRTGAQAIHP GYGFLSENADFAAACERAGVVFLGPPARAIQVMGDKITAKNAVAEFDVPVVPGVAKLGLGDDELVAAADEIGYPVLIKPS AGGGGKGMRLVEEPGRLREALVGARREAASSFGDDTLFLERFMLRPRHIEVQILADAHGNVVHLGERECSLQRRHQKVIE EAPSPLLDPETRARIGAAACNTARSVDYVGAGTVEFIVSADRPDEFFFMEMNTRLQVEHPVTEAVTGLDLVEWQLRVAAG EKLVFAQDDIELRGHAIEARVYAEDPARGFLPTGGRVLGVFEPSGDGVRVDSSLLPGTVVGSDYDPMLSKVIAHGADRDE ALARLDRALSHTAILGVQTNVEFLRFLLADERVRAGDLDTALLDARLADFAPLPAPDDVLAAAGLYRQSALAARARRFAG NPWAAPTGWRAGGSPAPVRTDMRTALRTETVSVWGPPEAAEVQVGAGERLSASAHLGPDRISVTLDGRRRDYRWAEADRH LWIADERGTWHLREAEQTTIHRAAGPQRAEILSPMPGSVIAVQTPSGSDVSEGDVVVVVEAMKMEHSLAAPVSGRVEVLV CVGDQVSVDQVLARVVPEESDPPADSSKDET
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=668, Percent_Identity=43.562874251497, Blast_Score=475, Evalue=1e-134, Organism=Homo sapiens, GI65506442, Length=668, Percent_Identity=43.562874251497, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI116805327, Length=440, Percent_Identity=50.6818181818182, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI295821183, Length=659, Percent_Identity=42.9438543247344, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI106049528, Length=460, Percent_Identity=44.7826086956522, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI106049295, Length=460, Percent_Identity=44.7826086956522, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI106049292, Length=460, Percent_Identity=44.7826086956522, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI38679971, Length=521, Percent_Identity=32.0537428023033, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI38679960, Length=520, Percent_Identity=32.5, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI38679977, Length=520, Percent_Identity=32.5, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI38679967, Length=520, Percent_Identity=32.5, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI38679974, Length=520, Percent_Identity=32.5, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI134142062, Length=522, Percent_Identity=32.9501915708812, Blast_Score=238, Evalue=2e-62, Organism=Escherichia coli, GI1789654, Length=448, Percent_Identity=47.3214285714286, Blast_Score=407, Evalue=1e-114, Organism=Caenorhabditis elegans, GI71987519, Length=667, Percent_Identity=43.1784107946027, Blast_Score=475, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17567343, Length=682, Percent_Identity=41.6422287390029, Blast_Score=459, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17562816, Length=461, Percent_Identity=46.6377440347072, Blast_Score=374, Evalue=1e-103, Organism=Caenorhabditis elegans, GI133931226, Length=493, Percent_Identity=31.237322515213, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71997168, Length=506, Percent_Identity=29.4466403162055, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71997163, Length=506, Percent_Identity=29.2490118577075, Blast_Score=191, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319685, Length=445, Percent_Identity=46.2921348314607, Blast_Score=414, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=42.7293064876958, Blast_Score=334, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=43.6241610738255, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6323863, Length=465, Percent_Identity=31.6129032258064, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6324343, Length=730, Percent_Identity=27.9452054794521, Blast_Score=228, Evalue=3e-60, Organism=Drosophila melanogaster, GI24651757, Length=673, Percent_Identity=41.7533432392273, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI24651759, Length=637, Percent_Identity=40.6593406593407, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI281363050, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652224, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652222, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652220, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652218, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652212, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652210, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652214, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI19921944, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24652216, Length=457, Percent_Identity=46.1706783369803, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI161076409, Length=702, Percent_Identity=28.7749287749288, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI161076407, Length=702, Percent_Identity=28.7749287749288, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586460, Length=702, Percent_Identity=28.7749287749288, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586458, Length=702, Percent_Identity=28.7749287749288, Blast_Score=243, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 71977; Mature: 71977
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETVLVANRGEIAVRVIRTLHRLGIRSVAVYSDPDATARHVLEADEAVRLGPAAARDSY CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEECCCCHHCCCC LNIDKVVEAATRTGAQAIHPGYGFLSENADFAAACERAGVVFLGPPARAIQVMGDKITAK CCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHCCCHHHC NAVAEFDVPVVPGVAKLGLGDDELVAAADEIGYPVLIKPSAGGGGKGMRLVEEPGRLREA CCCEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCHHHHHH LVGARREAASSFGDDTLFLERFMLRPRHIEVQILADAHGNVVHLGERECSLQRRHQKVIE HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHH EAPSPLLDPETRARIGAAACNTARSVDYVGAGTVEFIVSADRPDEFFFMEMNTRLQVEHP HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECC VTEAVTGLDLVEWQLRVAAGEKLVFAQDDIELRGHAIEARVYAEDPARGFLPTGGRVLGV HHHHHHCCHHEEEEEEEECCCEEEEECCCCEECCEEEEEEEEECCCCCCCCCCCCEEEEE FEPSGDGVRVDSSLLPGTVVGSDYDPMLSKVIAHGADRDEALARLDRALSHTAILGVQTN ECCCCCCEEECCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECC VEFLRFLLADERVRAGDLDTALLDARLADFAPLPAPDDVLAAAGLYRQSALAARARRFAG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NPWAAPTGWRAGGSPAPVRTDMRTALRTETVSVWGPPEAAEVQVGAGERLSASAHLGPDR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCCCCE ISVTLDGRRRDYRWAEADRHLWIADERGTWHLREAEQTTIHRAAGPQRAEILSPMPGSVI EEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCHHHHCCCCCCCEE AVQTPSGSDVSEGDVVVVVEAMKMEHSLAAPVSGRVEVLVCVGDQVSVDQVLARVVPEES EEECCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCC DPPADSSKDET CCCCCCCCCCC >Mature Secondary Structure MFETVLVANRGEIAVRVIRTLHRLGIRSVAVYSDPDATARHVLEADEAVRLGPAAARDSY CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEECCCCHHCCCC LNIDKVVEAATRTGAQAIHPGYGFLSENADFAAACERAGVVFLGPPARAIQVMGDKITAK CCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHCCCHHHC NAVAEFDVPVVPGVAKLGLGDDELVAAADEIGYPVLIKPSAGGGGKGMRLVEEPGRLREA CCCEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCHHHHHH LVGARREAASSFGDDTLFLERFMLRPRHIEVQILADAHGNVVHLGERECSLQRRHQKVIE HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHH EAPSPLLDPETRARIGAAACNTARSVDYVGAGTVEFIVSADRPDEFFFMEMNTRLQVEHP HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECC VTEAVTGLDLVEWQLRVAAGEKLVFAQDDIELRGHAIEARVYAEDPARGFLPTGGRVLGV HHHHHHCCHHEEEEEEEECCCEEEEECCCCEECCEEEEEEEEECCCCCCCCCCCCEEEEE FEPSGDGVRVDSSLLPGTVVGSDYDPMLSKVIAHGADRDEALARLDRALSHTAILGVQTN ECCCCCCEEECCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECC VEFLRFLLADERVRAGDLDTALLDARLADFAPLPAPDDVLAAAGLYRQSALAARARRFAG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NPWAAPTGWRAGGSPAPVRTDMRTALRTETVSVWGPPEAAEVQVGAGERLSASAHLGPDR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCCCCE ISVTLDGRRRDYRWAEADRHLWIADERGTWHLREAEQTTIHRAAGPQRAEILSPMPGSVI EEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCHHHHCCCCCCCEE AVQTPSGSDVSEGDVVVVVEAMKMEHSLAAPVSGRVEVLVCVGDQVSVDQVLARVVPEES EEECCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCC DPPADSSKDET CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]