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The map label for this gene is fadE19

Identifier: 41408410

GI number: 41408410

Start: 2591695

End: 2592861

Strand: Reverse

Name: fadE19

Synonym: MAP2312c

Alternate gene names: 41408410

Gene position: 2592861-2591695 (Counterclockwise)

Preceding gene: 41408411

Following gene: 41408409

Centisome position: 53.68

GC content: 66.41

Gene sequence:

>1167_bases
ATGACCACATCCCTCACCGCGGGAACGCTGCCCAAGGAATACCAGGACCTGCGCGACACCGTCGCCGAGTTCGCGCGGAC
CGTCGTCGCCCCCGTGTCAGCCAAACACGATGAGGAACACAGCTTTCCGTACGAGGTCGTCGCCAAGATGGGGGAGATGG
GCCTGTTCGGCCTGCCCTTCCCCGAGGAGTACGGCGGCATGGGCGGCGACTACTTCGCGCTGTCGCTGGCGCTGGAGGAA
CTGGGCAAGGTCGACCAGTCGGTGGCCATCACCCTGGAGGCCGGGGTCAGCCTGGGCGCCATGCCGATCTACCGGTTCGG
CAACGAGGAACAGAAACGCAAGTGGCTGCCGGACTTGACGGCCGGGCGGGCGCTGGCCGGCTTCGGGCTCACCGAGCCGG
GCGCCGGTTCCGACGCCGGCGCCACCCGCACCACCGCCCGGCTCGAGGACGGCGAATGGGTGATCAACGGCAGCAAGCAA
TTCATCACCAACTCGGGAACCGACATCACGTCGCTGGTCACCGTCACCGCCGTCACCGGCACGGTCGGCGCGGACAAGAA
GGAGATCTCCACCATCATCGTGCCCAGCGGCACACCGGGATTCACCGTCGAACCGGTCTACAGCAAGGTGGGCTGGAACG
CGTCGGACACCCACCCGCTGAGTTTTTCCGACGCCCGGGTGCCGGAAGAGAACCTGCTCGGGGCCCGCGGGACGGGCTAC
GCGAACTTCCTGTCCATCCTGGACGAGGGCCGCATCGCGATCGCCGCACTGGCGACCGGCGCCGCGCAGGGCTGCGTCGA
CGAGAGCGTCAAGTACGCCAAGGAGCGCCAGTCGTTCGGTCAACCGATCGGTAGCTATCAGGCGATCAGCTTCAAGATCG
CCCGAATGGAGGCGCGTGCCCACGTGGCCCGCACCGCGTACTACGATGCGGCTGCAAAGATGTTGGCGGGCAAGCCCTTC
AAGAAGGAGGCGGCGATCGCGAAGATGATCGCGTCGGAAGCGGCGATGGACAACGCCCGCGACGCAACTCAGATCCATGG
CGGCTACGGCTTCATGAACGAGTATCCGGTGGCCCGTCACTACCGCGACAGCAAGATCCTCGAAATCGGCGAGGGCACCA
CCGAGGTGCAGCTGATGCTCATCGCCCGCTCGCTGGGGCTGTCATGA

Upstream 100 bases:

>100_bases
TGCTGGTCTGCGTCGGCGACCAGGTGAGCGTGGACCAGGTGCTGGCCCGGGTGGTGCCCGAGGAATCCGACCCGCCGGCC
GATTCGAGTAAGGACGAGAC

Downstream 100 bases:

>100_bases
GCGAACCAGTCAAATCGGTTGTCCAACGCGGCTTGTGGTTCGAAGAGTTCGAGATCGGCACCACCTACCTGCACCGCCCC
GGTCGCACGATCACCGAGGC

Product: FadE19

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTTSLTAGTLPKEYQDLRDTVAEFARTVVAPVSAKHDEEHSFPYEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEE
LGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKRKWLPDLTAGRALAGFGLTEPGAGSDAGATRTTARLEDGEWVINGSKQ
FITNSGTDITSLVTVTAVTGTVGADKKEISTIIVPSGTPGFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGY
ANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPF
KKEAAIAKMIASEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIARSLGLS

Sequences:

>Translated_388_residues
MTTSLTAGTLPKEYQDLRDTVAEFARTVVAPVSAKHDEEHSFPYEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEE
LGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKRKWLPDLTAGRALAGFGLTEPGAGSDAGATRTTARLEDGEWVINGSKQ
FITNSGTDITSLVTVTAVTGTVGADKKEISTIIVPSGTPGFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGY
ANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPF
KKEAAIAKMIASEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIARSLGLS
>Mature_387_residues
TTSLTAGTLPKEYQDLRDTVAEFARTVVAPVSAKHDEEHSFPYEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEEL
GKVDQSVAITLEAGVSLGAMPIYRFGNEEQKRKWLPDLTAGRALAGFGLTEPGAGSDAGATRTTARLEDGEWVINGSKQF
ITNSGTDITSLVTVTAVTGTVGADKKEISTIIVPSGTPGFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGYA
NFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPFK
KEAAIAKMIASEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIARSLGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=43.0851063829787, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=37.9310344827586, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI187960098, Length=372, Percent_Identity=36.5591397849462, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI4557231, Length=372, Percent_Identity=36.5591397849462, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=32.2751322751323, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI7656849, Length=382, Percent_Identity=34.0314136125654, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI21361497, Length=390, Percent_Identity=35.6410256410256, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=36.8421052631579, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI76496475, Length=380, Percent_Identity=36.8421052631579, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=32.7127659574468, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI226958414, Length=341, Percent_Identity=32.5513196480938, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI4503943, Length=372, Percent_Identity=29.8387096774194, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI7669494, Length=347, Percent_Identity=30.835734870317, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI38505218, Length=349, Percent_Identity=29.2263610315186, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI48976061, Length=286, Percent_Identity=29.7202797202797, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI211971008, Length=286, Percent_Identity=29.7202797202797, Blast_Score=103, Evalue=4e-22,
Organism=Escherichia coli, GI87081958, Length=350, Percent_Identity=32.2857142857143, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1786223, Length=352, Percent_Identity=28.4090909090909, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI87081702, Length=364, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87082384, Length=275, Percent_Identity=24.7272727272727, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17508101, Length=374, Percent_Identity=37.4331550802139, Blast_Score=240, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17534899, Length=376, Percent_Identity=37.7659574468085, Blast_Score=237, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=36.968085106383, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=37.5342465753425, Blast_Score=234, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=34.5744680851064, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17538396, Length=373, Percent_Identity=33.2439678284182, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17533517, Length=379, Percent_Identity=33.245382585752, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71985184, Length=352, Percent_Identity=36.0795454545455, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71990804, Length=287, Percent_Identity=39.3728222996516, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=29.3800539083558, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=29.3650793650794, Blast_Score=170, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI71985192, Length=300, Percent_Identity=34.3333333333333, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=371, Percent_Identity=28.3018867924528, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=38.6266094420601, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI71982178, Length=292, Percent_Identity=30.8219178082192, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17562446, Length=287, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17531909, Length=247, Percent_Identity=25.1012145748988, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=26.4367816091954, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=382, Percent_Identity=38.7434554973822, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24666513, Length=369, Percent_Identity=40.3794037940379, Blast_Score=248, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24646207, Length=379, Percent_Identity=38.2585751978892, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=36.8421052631579, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=33.6842105263158, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI281363737, Length=357, Percent_Identity=34.733893557423, Blast_Score=197, Evalue=8e-51,
Organism=Drosophila melanogaster, GI19920834, Length=392, Percent_Identity=27.2959183673469, Blast_Score=137, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41375; Mature: 41244

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSLTAGTLPKEYQDLRDTVAEFARTVVAPVSAKHDEEHSFPYEVVAKMGEMGLFGLPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PEEYGGMGGDYFALSLALEELGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKRKWLPDLT
CHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCC
AGRALAGFGLTEPGAGSDAGATRTTARLEDGEWVINGSKQFITNSGTDITSLVTVTAVTG
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCHHHHEEEHHEEC
TVGADKKEISTIIVPSGTPGFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGY
CCCCCHHHCEEEEEECCCCCCEECHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCH
ANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARA
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH
HVARTAYYDAAAKMLAGKPFKKEAAIAKMIASEAAMDNARDATQIHGGYGFMNEYPVARH
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCHHHH
YRDSKILEIGEGTTEVQLMLIARSLGLS
CCCCCEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSLTAGTLPKEYQDLRDTVAEFARTVVAPVSAKHDEEHSFPYEVVAKMGEMGLFGLPF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PEEYGGMGGDYFALSLALEELGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKRKWLPDLT
CHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCC
AGRALAGFGLTEPGAGSDAGATRTTARLEDGEWVINGSKQFITNSGTDITSLVTVTAVTG
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCHHHHEEEHHEEC
TVGADKKEISTIIVPSGTPGFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGY
CCCCCHHHCEEEEEECCCCCCEECHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCH
ANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARA
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH
HVARTAYYDAAAKMLAGKPFKKEAAIAKMIASEAAMDNARDATQIHGGYGFMNEYPVARH
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCHHHH
YRDSKILEIGEGTTEVQLMLIARSLGLS
CCCCCEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]