| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is maoC [H]
Identifier: 41408409
GI number: 41408409
Start: 2591198
End: 2591698
Strand: Reverse
Name: maoC [H]
Synonym: MAP2311c
Alternate gene names: 41408409
Gene position: 2591698-2591198 (Counterclockwise)
Preceding gene: 41408410
Following gene: 41408408
Centisome position: 53.66
GC content: 66.87
Gene sequence:
>501_bases ATGAGCGAACCAGTCAAATCGGTTGTCCAACGCGGCTTGTGGTTCGAAGAGTTCGAGATCGGCACCACCTACCTGCACCG CCCCGGTCGCACGATCACCGAGGCCGACAACGTCTTGTTCACCACGCTGACCATGAACACCCAGTCGCTGCACCTCGACG CGGCCTGGGCCGCGCAGCAGCCGGGCTTTCGCGGCGAGCGGCTGGTGAACTCCATGTTCACCCTGTCCACCCTGGTGGGG CTGTCGGTGTCGCAGCTGACGCTCGGCACCATCGTGGCCAACCTGGGCTTCTCCGAGGTGTCGTTCCCCAAGCCTGTCTT CCACGGCGACACCCTCTACGCCGAAACCGTCTGCACCGGCAAGCGCGAGTCCAAGAGCCGGCCCGGCGAGGGCATCGTCA CCCTCGAGCACACCGGGCGCAACCAGCACGGCGACGTCGTGGCCCGCGCCGTGCGCACCACGCTGGTGCAGAAGCGCCCA AGCGACCAGGAGGCTCCGTGA
Upstream 100 bases:
>100_bases ATCCGGTGGCCCGTCACTACCGCGACAGCAAGATCCTCGAAATCGGCGAGGGCACCACCGAGGTGCAGCTGATGCTCATC GCCCGCTCGCTGGGGCTGTC
Downstream 100 bases:
>100_bases ACCCGCACGCCGCCGGTCCGGCATGGCTGTTCTGCCCGGCCGACCGTCCCGAGCGTTTCGCCAAGGCAGCCGCGGCCGCC GACGTGGTGATCCTCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic acid degradation protein paaZ [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSEPVKSVVQRGLWFEEFEIGTTYLHRPGRTITEADNVLFTTLTMNTQSLHLDAAWAAQQPGFRGERLVNSMFTLSTLVG LSVSQLTLGTIVANLGFSEVSFPKPVFHGDTLYAETVCTGKRESKSRPGEGIVTLEHTGRNQHGDVVARAVRTTLVQKRP SDQEAP
Sequences:
>Translated_166_residues MSEPVKSVVQRGLWFEEFEIGTTYLHRPGRTITEADNVLFTTLTMNTQSLHLDAAWAAQQPGFRGERLVNSMFTLSTLVG LSVSQLTLGTIVANLGFSEVSFPKPVFHGDTLYAETVCTGKRESKSRPGEGIVTLEHTGRNQHGDVVARAVRTTLVQKRP SDQEAP >Mature_165_residues SEPVKSVVQRGLWFEEFEIGTTYLHRPGRTITEADNVLFTTLTMNTQSLHLDAAWAAQQPGFRGERLVNSMFTLSTLVGL SVSQLTLGTIVANLGFSEVSFPKPVFHGDTLYAETVCTGKRESKSRPGEGIVTLEHTGRNQHGDVVARAVRTTLVQKRPS DQEAP
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787653, Length=153, Percent_Identity=35.9477124183007, Blast_Score=73, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR002539 - InterPro: IPR011966 [H]
Pfam domain/function: PF00171 Aldedh; PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 18258; Mature: 18127
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVKSVVQRGLWFEEFEIGTTYLHRPGRTITEADNVLFTTLTMNTQSLHLDAAWAAQQ CCHHHHHHHHHCCCEEHEECCCCEEECCCCCEECCCCEEEEEEEECCCEEEEEEHHHCCC PGFRGERLVNSMFTLSTLVGLSVSQLTLGTIVANLGFSEVSFPKPVFHGDTLYAETVCTG CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCC KRESKSRPGEGIVTLEHTGRNQHGDVVARAVRTTLVQKRPSDQEAP CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEPVKSVVQRGLWFEEFEIGTTYLHRPGRTITEADNVLFTTLTMNTQSLHLDAAWAAQQ CHHHHHHHHHCCCEEHEECCCCEEECCCCCEECCCCEEEEEEEECCCEEEEEEHHHCCC PGFRGERLVNSMFTLSTLVGLSVSQLTLGTIVANLGFSEVSFPKPVFHGDTLYAETVCTG CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCC KRESKSRPGEGIVTLEHTGRNQHGDVVARAVRTTLVQKRPSDQEAP CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]