| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is furB
Identifier: 41408237
GI number: 41408237
Start: 2369630
End: 2370037
Strand: Direct
Name: furB
Synonym: MAP2139
Alternate gene names: 41408237
Gene position: 2369630-2370037 (Clockwise)
Preceding gene: 41408236
Following gene: 41408241
Centisome position: 49.06
GC content: 67.89
Gene sequence:
>408_bases ATGACGCCGTCCGGCGACGGGGCAGGAGTGAGTGTCCGCTCCACCCGGCAGCGCGCCGCGATCTCCACTCTGCTGGAGAC CCTCGACGACTTCCGCTCCGCCCAGGAGTTGCACGACGAGCTGCGCCGCCGTGGCGAGAACATCGGGCTGACCACCGTCT ACCGCACGCTGCAGTCGATGGCCGCCGCGGGCCTGATCGACACGCTGCGCACCGACACCGGCGAGTCGGTGTACCGCCGA TGTTCCGAGCATCATCACCACCACCTGGTGTGCCGCAGTTGCGGGTCCACCATCGAGGTGGGCGATCACGAGGTCGAGGA GTGGGCCACCGCGGTGGCCGCCAAGCACGGTTTCTCCGACGTCAGCCACACCATCGAAATCTTCGGCACCTGCTCGGAGT GCCGGTAA
Upstream 100 bases:
>100_bases GGGAGCGGTCCGGACGCGAGGTGCTCTACCGGCTCGCCGATCATCACCTCGCGCACATCGTGGTCGACGCCGTCGCCCAC GCCGGCGAAGAGCCGCGCCC
Downstream 100 bases:
>100_bases ACCGCGCCGAACGTGAAGCTAGTTTCACGTTCGCGGTCGAGCGTGAAACTAGCTTCACGCTCGGCAGGCGGGGAAGGACT CAATCGGTCAGGGTGTGACG
Product: FurB
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTPSGDGAGVSVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMAAAGLIDTLRTDTGESVYRR CSEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSDVSHTIEIFGTCSECR
Sequences:
>Translated_135_residues MTPSGDGAGVSVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMAAAGLIDTLRTDTGESVYRR CSEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSDVSHTIEIFGTCSECR >Mature_134_residues TPSGDGAGVSVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMAAAGLIDTLRTDTGESVYRRC SEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSDVSHTIEIFGTCSECR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=38.1679389312977, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14869; Mature: 14737
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSGDGAGVSVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAAGLIDTLRTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHH VSHTIEIFGTCSECR HHHHHHHHHHHHCCC >Mature Secondary Structure TPSGDGAGVSVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAAGLIDTLRTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHH VSHTIEIFGTCSECR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]