| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is arsR [C]
Identifier: 41408236
GI number: 41408236
Start: 2369208
End: 2369633
Strand: Direct
Name: arsR [C]
Synonym: MAP2138
Alternate gene names: 41408236
Gene position: 2369208-2369633 (Clockwise)
Preceding gene: 41408232
Following gene: 41408237
Centisome position: 49.05
GC content: 75.12
Gene sequence:
>426_bases ATGTCCCCCTCACCTGCCTCGATGCCGGCCGCCACCGACGGCGCCATGGGACCGGAGCCGGGCCTGCCCGCCCACGACCA CGACGGGCTCGCCGCCGCGGGCCACCCCGGTCCGGCCGACTACCCCGTCCCGCCGCCGCGGGACATCCTCGACGCCGCCG GCGAGCTGTTGCGGGCGCTGGCGGCGCCGGTGCGGATCGCGATCGTGCTGCAGTTGCGCCAGTCCCATCGCTGCGTGCAC GAGCTGGTCGACGCGCTCGGGGTGCCCCAGCCGCTGGTCAGCCAGCACCTGAAGATCCTCAAGGCGGCCGGTGTGGTCGC CGGGGAGCGGTCCGGACGCGAGGTGCTCTACCGGCTCGCCGATCATCACCTCGCGCACATCGTGGTCGACGCCGTCGCCC ACGCCGGCGAAGAGCCGCGCCCATGA
Upstream 100 bases:
>100_bases CATCATGCATGTGACAGTGGAAGCCGGCCGGTCGCGATACTCAACGGCGGATGCTTTCCCACTACCTGGCACTTCTCGAG GTGATGCCGCTCCCATGACG
Downstream 100 bases:
>100_bases CGCCGTCCGGCGACGGGGCAGGAGTGAGTGTCCGCTCCACCCGGCAGCGCGCCGCGATCTCCACTCTGCTGGAGACCCTC GACGACTTCCGCTCCGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator ArsR Family; Transcriptional Regulator ArsR Family Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulator; Transcriptional Regulator Arsr Family; Arsr Family Transcriptional Regulator; Cadmium Efflux System Accessory Protein; Transcriptional Regulator ArsR-Family; Transcription Regulator ArsR
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSPSPASMPAATDGAMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRDILDAAGELLRALAAPVRIAIVLQLRQSHRCVH ELVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLADHHLAHIVVDAVAHAGEEPRP
Sequences:
>Translated_141_residues MSPSPASMPAATDGAMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRDILDAAGELLRALAAPVRIAIVLQLRQSHRCVH ELVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLADHHLAHIVVDAVAHAGEEPRP >Mature_140_residues SPSPASMPAATDGAMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRDILDAAGELLRALAAPVRIAIVLQLRQSHRCVHE LVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLADHHLAHIVVDAVAHAGEEPRP
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14657; Mature: 14526
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPASMPAATDGAMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRDILDAAGELLRAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAPVRIAIVLQLRQSHRCVHELVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DHHLAHIVVDAVAHAGEEPRP HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SPSPASMPAATDGAMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRDILDAAGELLRAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAPVRIAIVLQLRQSHRCVHELVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DHHLAHIVVDAVAHAGEEPRP HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA