| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408209
Identifier: 41408209
GI number: 41408209
Start: 2336304
End: 2337773
Strand: Reverse
Name: 41408209
Synonym: MAP2111c
Alternate gene names: NA
Gene position: 2337773-2336304 (Counterclockwise)
Preceding gene: 41408210
Following gene: 41408208
Centisome position: 48.4
GC content: 68.5
Gene sequence:
>1470_bases ATGCTTCGGTTGAACCGCCGGACCTGGATCCAGTTGTCGATTCTGGCGCTGGTGACCGTTGTTTCCTGCGGCGCAATGGC ATTCAACTTCATGAAGCTGCCCGCGACCCTGTTCGGGATCGGCGAGTACCGGGTCACGGTCGACCTGCCGCAATCGGGTG GGCTCTACCAGACCTCGGTGGTCACCTACCGCGGCACCGACGTCGGCCAGGTCAAATCGGTCGACGTCACCGCGACCGGA GTGCGCGCGGTGCTGGCTATGCGGTCGGGGATCGAGGTGCCATTCGACGTCCAGGCGTCGGTGCACAGCCGCTCGGCGAT CGGTGAGCAGTACATCGAGCTGACCCCGCGGCCCGGCACCGGCGACCACCAGTCCCGGACGCTGCGCGACGGCGACGTCA TCACCGCCGGCCGCGTCGACGTACCCGTCGACATCGGGCGGCTGCTCGACATGACCAACCGTGCGCTGCAAGCGATTCCC CGCGACAACCTGCGCACGGTGATCGACGAGACCAACCGGGCGGTCGGCGGACTGGGCCCCGAGTTGTCCCGCATCGTCGA CGGGTCCACCGCGCTGGCCGTCGCCGGCGGCCACACCGTCGACCCGCTCGCCACGCTGATCGATCAATCTCCGGCGGTGC TCAACTCACAGGTCCAGACCTCCGGGGCGATCGCCACCTGGGCCGAGCGCACCGCGGCCCTCATGGCGCAGTTCAAGGCG CAGGATGCCGCGGTGCGAGACCTGTTGACGCGCGGCACTTCCGGAGTGGAGGAGGGGCGCGCCCTGCTGGACCGGGTGAC GCCCGCCCTGCCGGTGCTGTTCGCCAACCTGGTGAGCCTGGGCGACATCGCCGTCGTCTACCGCCACGACATCGAACAAC TGCTGGTGTTGCTGCCACAGGGCATCGCGGCCATGGCGGCGATCATCGTGCCCAGCTCCAACACCAAGCAGGAGTACCGG GGCGCCCAGTTGGACTTCAACCTCAACCTCAACCTGCCGCCGCCGTGCACGACGGGTTATCTGCCTCCGGCGCAACGCCG TTCGCCCGCCAGCGTCGACGCGCCGGACCGACCCGCCGCCGACTTGTATTGCCGGGTGCCGCAGGACTCGGAATTCAACG TCCGCGGCGTGCGCAACATCCCCTGTGAGAGCAAGCCGTGGAAACGCGCACCGACCGTCGAACTGTGCGAAAGCGACGAA GAATACGTGCCGCTCAACGACGGCTACAACTGGAAGGGCGACCCCAATGCCACCACCAGTGGTCAAGGCGTGCCGCAGTA TCCGCCGGGACAGGATCCGCGGCTGCCGCCACCGCGCGGCACCGCCCCGGCACCCCCGCCCGTCGCGGTGGCGCCCTACG ACCCGGCCACCGGGGATTACATCGGGCCGGACGGCCGCCGCTACACCGAGTCCGATTTGGCGCACCCACGCGCCAAAAGC TGGCAATCACTTCTGGTTCCGCAACCCTGA
Upstream 100 bases:
>100_bases CCCAGCTCGAACTGCAGTGGGGTCGGACCATCGGCATGCAGCCCAGTCCCGTCACCGGCGGCAACCCGCTGACCTATCCG TACCATTTCGGGGGATACTG
Downstream 100 bases:
>100_bases GGAGTGCGAGCATCATGGCCGACGAATCTGATACCCCCGCCGCCGAGGAAAAGTCCGACGCAGCAACACAACTCGACACC GACGAGGGAGACGATCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS WQSLLVPQP
Sequences:
>Translated_489_residues MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS WQSLLVPQP >Mature_489_residues MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS WQSLLVPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52525; Mature: 52525
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSV CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEEE VTYRGTDVGQVKSVDVTATGVRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCHHEEECCCCCC GDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIPRDNLRTVIDETNRAVGGLGP CCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH ELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHH QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCC GIAAMAAIIVPSSNTKQEYRGAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAA CHHHEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDEEYVPLNDGYNWKGDPNATTS CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCC GQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHH WQSLLVPQP HHHCCCCCC >Mature Secondary Structure MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSV CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEEE VTYRGTDVGQVKSVDVTATGVRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCHHEEECCCCCC GDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIPRDNLRTVIDETNRAVGGLGP CCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH ELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHH QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCC GIAAMAAIIVPSSNTKQEYRGAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAA CHHHEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDEEYVPLNDGYNWKGDPNATTS CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCC GQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHH WQSLLVPQP HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA