Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408209

Identifier: 41408209

GI number: 41408209

Start: 2336304

End: 2337773

Strand: Reverse

Name: 41408209

Synonym: MAP2111c

Alternate gene names: NA

Gene position: 2337773-2336304 (Counterclockwise)

Preceding gene: 41408210

Following gene: 41408208

Centisome position: 48.4

GC content: 68.5

Gene sequence:

>1470_bases
ATGCTTCGGTTGAACCGCCGGACCTGGATCCAGTTGTCGATTCTGGCGCTGGTGACCGTTGTTTCCTGCGGCGCAATGGC
ATTCAACTTCATGAAGCTGCCCGCGACCCTGTTCGGGATCGGCGAGTACCGGGTCACGGTCGACCTGCCGCAATCGGGTG
GGCTCTACCAGACCTCGGTGGTCACCTACCGCGGCACCGACGTCGGCCAGGTCAAATCGGTCGACGTCACCGCGACCGGA
GTGCGCGCGGTGCTGGCTATGCGGTCGGGGATCGAGGTGCCATTCGACGTCCAGGCGTCGGTGCACAGCCGCTCGGCGAT
CGGTGAGCAGTACATCGAGCTGACCCCGCGGCCCGGCACCGGCGACCACCAGTCCCGGACGCTGCGCGACGGCGACGTCA
TCACCGCCGGCCGCGTCGACGTACCCGTCGACATCGGGCGGCTGCTCGACATGACCAACCGTGCGCTGCAAGCGATTCCC
CGCGACAACCTGCGCACGGTGATCGACGAGACCAACCGGGCGGTCGGCGGACTGGGCCCCGAGTTGTCCCGCATCGTCGA
CGGGTCCACCGCGCTGGCCGTCGCCGGCGGCCACACCGTCGACCCGCTCGCCACGCTGATCGATCAATCTCCGGCGGTGC
TCAACTCACAGGTCCAGACCTCCGGGGCGATCGCCACCTGGGCCGAGCGCACCGCGGCCCTCATGGCGCAGTTCAAGGCG
CAGGATGCCGCGGTGCGAGACCTGTTGACGCGCGGCACTTCCGGAGTGGAGGAGGGGCGCGCCCTGCTGGACCGGGTGAC
GCCCGCCCTGCCGGTGCTGTTCGCCAACCTGGTGAGCCTGGGCGACATCGCCGTCGTCTACCGCCACGACATCGAACAAC
TGCTGGTGTTGCTGCCACAGGGCATCGCGGCCATGGCGGCGATCATCGTGCCCAGCTCCAACACCAAGCAGGAGTACCGG
GGCGCCCAGTTGGACTTCAACCTCAACCTCAACCTGCCGCCGCCGTGCACGACGGGTTATCTGCCTCCGGCGCAACGCCG
TTCGCCCGCCAGCGTCGACGCGCCGGACCGACCCGCCGCCGACTTGTATTGCCGGGTGCCGCAGGACTCGGAATTCAACG
TCCGCGGCGTGCGCAACATCCCCTGTGAGAGCAAGCCGTGGAAACGCGCACCGACCGTCGAACTGTGCGAAAGCGACGAA
GAATACGTGCCGCTCAACGACGGCTACAACTGGAAGGGCGACCCCAATGCCACCACCAGTGGTCAAGGCGTGCCGCAGTA
TCCGCCGGGACAGGATCCGCGGCTGCCGCCACCGCGCGGCACCGCCCCGGCACCCCCGCCCGTCGCGGTGGCGCCCTACG
ACCCGGCCACCGGGGATTACATCGGGCCGGACGGCCGCCGCTACACCGAGTCCGATTTGGCGCACCCACGCGCCAAAAGC
TGGCAATCACTTCTGGTTCCGCAACCCTGA

Upstream 100 bases:

>100_bases
CCCAGCTCGAACTGCAGTGGGGTCGGACCATCGGCATGCAGCCCAGTCCCGTCACCGGCGGCAACCCGCTGACCTATCCG
TACCATTTCGGGGGATACTG

Downstream 100 bases:

>100_bases
GGAGTGCGAGCATCATGGCCGACGAATCTGATACCCCCGCCGCCGAGGAAAAGTCCGACGCAGCAACACAACTCGACACC
GACGAGGGAGACGATCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG
VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP
RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA
QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR
GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE
EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS
WQSLLVPQP

Sequences:

>Translated_489_residues
MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG
VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP
RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA
QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR
GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE
EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS
WQSLLVPQP
>Mature_489_residues
MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSVVTYRGTDVGQVKSVDVTATG
VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGTGDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIP
RDNLRTVIDETNRAVGGLGPELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA
QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQGIAAMAAIIVPSSNTKQEYR
GAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAADLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDE
EYVPLNDGYNWKGDPNATTSGQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS
WQSLLVPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52525; Mature: 52525

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSV
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEEE
VTYRGTDVGQVKSVDVTATGVRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT
EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCHHEEECCCCCC
GDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIPRDNLRTVIDETNRAVGGLGP
CCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
ELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA
HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCC
GIAAMAAIIVPSSNTKQEYRGAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAA
CHHHEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDEEYVPLNDGYNWKGDPNATTS
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCC
GQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHH
WQSLLVPQP
HHHCCCCCC
>Mature Secondary Structure
MLRLNRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQSGGLYQTSV
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEEE
VTYRGTDVGQVKSVDVTATGVRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT
EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCHHEEECCCCCC
GDHQSRTLRDGDVITAGRVDVPVDIGRLLDMTNRALQAIPRDNLRTVIDETNRAVGGLGP
CCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
ELSRIVDGSTALAVAGGHTVDPLATLIDQSPAVLNSQVQTSGAIATWAERTAALMAQFKA
HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
QDAAVRDLLTRGTSGVEEGRALLDRVTPALPVLFANLVSLGDIAVVYRHDIEQLLVLLPQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCC
GIAAMAAIIVPSSNTKQEYRGAQLDFNLNLNLPPPCTTGYLPPAQRRSPASVDAPDRPAA
CHHHEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLYCRVPQDSEFNVRGVRNIPCESKPWKRAPTVELCESDEEYVPLNDGYNWKGDPNATTS
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCC
GQGVPQYPPGQDPRLPPPRGTAPAPPPVAVAPYDPATGDYIGPDGRRYTESDLAHPRAKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHH
WQSLLVPQP
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA