| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408181
Identifier: 41408181
GI number: 41408181
Start: 2302391
End: 2303305
Strand: Reverse
Name: 41408181
Synonym: MAP2083c
Alternate gene names: NA
Gene position: 2303305-2302391 (Counterclockwise)
Preceding gene: 41408184
Following gene: 41408176
Centisome position: 47.69
GC content: 68.96
Gene sequence:
>915_bases ATGCGGGTTGTTCGCCTGTTCGCTGCGGTCCTGACCATCCTCACAGCCGGGCTGCTGTGGGCGACCCCGGCCGGCGCGCA ACCGCCGACCAAGCTCACCGATCACCTCACCGACAGCAACCGGGTGCTGACGGATTCGGATCGGGCGGCGGTCAGCTCGG CCATCGACCGGCTGTACCGCGATCGACACATCCAACTGTGGGTGGTCTACGTCGACAACTTCAACAAGTTCAAACCCGAC AACTGGGCCGACCGCACCCGCAGCGAAAGCGGCATGGGCGACCGCGACGTGCTGCTGGCCGTGGCCACCAACACCAAGTT GTTCACACTCAACCCCCCGCCGCAGCTGCAGAACCCGACAGCCGACGAGTTGAATAGCCTGCGCACCAACAAGATTGGGC CGGCAGTCAGTGCGAAGAACTGGGCCATCGCCGCCATCGCCGCGGCCGATGGTCTGGACACTTCACCCAGCGTGTCTCAT CCCGCGAGCCCGGCCAAGCGGGCCTGGCTGCCGATCGCGATCGCTGTCATCGCCGTCGTGGTCGTCGTCGTGCTGCTGCT GGTGCTCTATCGGGCGCGGCGCCGCCGGCGCGCCGCTCGCGGAGTCGGCCCCGGCGGTCCGCAGGATCGTTCGTTGGGGG AGGCGTTGTCGACGGCCGAGGCCAGGTTGCGCCAAATCTCCGACTACGTCGCCCGGCATCACGACAGCGTCGGCGCCGAC GCCCGCAGCCGCCTCGACGAGGCCACCCGGCACCTGGCGGCCGCGCGCGCCAAGCAGGCAAGCAACGACACCGAGGCGAT CGCCCATGCCAACCGGGCATCGACGTTGGCGGCAGAGGCGCAACACCTGGCGAACGACGACGTGCTGGGCGCCCACCGCA CGACGCGACGCCGGGGTGCCGCATCCAAGCGATGA
Upstream 100 bases:
>100_bases TCCGGACGGATCCTGCAGGTCACCCGCGTGCCGAAACGGATGCGCCGGCCGCGCCCCGGCAGGTGGAGCCCCGCCGCAAA ATGGCGGCTAGATTACCCCT
Downstream 100 bases:
>100_bases CCTGAACCGTCGAACGTGGAGTTGTTGCGGAAAATCGGCCGGATCCGCGCAACAACCCCACGTTCGGCGTCACGACGAAC GGTAGCGAGCACGCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR
Sequences:
>Translated_304_residues MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR >Mature_304_residues MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYRDRHIQLWVVYVDNFNKFKPD NWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPTADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSH PASPAKRAWLPIAIAVIAVVVVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGAASKR
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 32858; Mature: 32858
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH DRHIQLWVVYVDNFNKFKPDNWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPT CCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC ADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSHPASPAKRAWLPIAIAVIAVV HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC ASKR CCCC >Mature Secondary Structure MRVVRLFAAVLTILTAGLLWATPAGAQPPTKLTDHLTDSNRVLTDSDRAAVSSAIDRLYR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH DRHIQLWVVYVDNFNKFKPDNWADRTRSESGMGDRDVLLAVATNTKLFTLNPPPQLQNPT CCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC ADELNSLRTNKIGPAVSAKNWAIAAIAAADGLDTSPSVSHPASPAKRAWLPIAIAVIAVV HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VVVVLLLVLYRARRRRRAARGVGPGGPQDRSLGEALSTAEARLRQISDYVARHHDSVGAD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ARSRLDEATRHLAAARAKQASNDTEAIAHANRASTLAAEAQHLANDDVLGAHRTTRRRGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC ASKR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]