| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lppO
Identifier: 41408146
GI number: 41408146
Start: 2256503
End: 2257045
Strand: Direct
Name: lppO
Synonym: MAP2048
Alternate gene names: 41408146
Gene position: 2256503-2257045 (Clockwise)
Preceding gene: 41408145
Following gene: 41408147
Centisome position: 46.72
GC content: 66.48
Gene sequence:
>543_bases ATGACGTCTAGCGGAGGGCCGACAATGAGGAACCTGAACGATCGGCGCCGGGTCGTCGGCGCCGCGACCGCGCTCGGTGT GCTGGCGTTGGGGGCCGGGCTGCCCGGGTGTTCCGGCAAGGACGGCCACCCGGCCGCCACCCCGAGTTCCACCGCCACGT TGGCAAGCACCACCGTGATGATCGACGGGAACAAGCACACCATGATCGCCGGCGTCGACTGCACCAGCGCAGCAGCACAA CCGAATGCGTCGCCGCCGGAATCGGGAGACCTCACCACCCGCATCAGCGTGCACGACGATTCGGCGTCGGTCTCCCTGGC GGTCTCCGACGAACAACCGCCCACCGTCGATGGCTTCGCGATTTCGCTCAAGCTCGACAACGGCCAATATCAATTGCCGT ACCAGGGAACCAAATCGCCGACTCAGGTGCAGGCAACCAAGGACAGCAAGAGCTACACGGTCACCGGCACCGGCCAGGCG ACCACACCCGGCCAAAGCGGGACGCGCGACGTGACGTTCGGGATCCACGTCACCTGCCCGTGA
Upstream 100 bases:
>100_bases GCGTCGTGAACACGGGCGCGTTCAACGCCCGTTCGCCCGACCGCCGCACGCCATGATCGGCTGGGCGTCCCGACGGTAAC GATCGGGCTTTATAGTCCTG
Downstream 100 bases:
>100_bases GAACGGTGGTTGTCCGCCGCGACGGCCTCTGAGATGCTGACTGCTTGGACATTTTCGCGCAGTGGCAAGGCGGCGGCACC GAACTTCGTTGGCGCTCGAC
Product: LppO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQ PNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQA TTPGQSGTRDVTFGIHVTCP
Sequences:
>Translated_180_residues MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQ PNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQA TTPGQSGTRDVTFGIHVTCP >Mature_179_residues TSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVMIDGNKHTMIAGVDCTSAAAQP NASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQAT TPGQSGTRDVTFGIHVTCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18188; Mature: 18057
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE IDGNKHTMIAGVDCTSAAAQPNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFA EECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEE ISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQATTPGQSGTRDVTFGIHVTCP EEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure TSSGGPTMRNLNDRRRVVGAATALGVLALGAGLPGCSGKDGHPAATPSSTATLASTTVM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE IDGNKHTMIAGVDCTSAAAQPNASPPESGDLTTRISVHDDSASVSLAVSDEQPPTVDGFA EECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEE ISLKLDNGQYQLPYQGTKSPTQVQATKDSKSYTVTGTGQATTPGQSGTRDVTFGIHVTCP EEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]