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The map label for this gene is ctaF

Identifier: 41408037

GI number: 41408037

Start: 2140515

End: 2140934

Strand: Reverse

Name: ctaF

Synonym: MAP1939c

Alternate gene names: 41408037

Gene position: 2140934-2140515 (Counterclockwise)

Preceding gene: 41408038

Following gene: 41408036

Centisome position: 44.33

GC content: 66.9

Gene sequence:

>420_bases
ATGCATATCGAAGCCAGGCTGTTCGAGTTCATCGCCGGGTTCTTCTTTCTGACCGCACTGCTCTACGGCGTGCTGACCGC
GCTGTTCGCCACCGGCGGCGAGGAGTGGGCGGGGACCACCGCGCTGGCGCTGACGGGCGGCCTGGCGCTCATCGTGGCCA
CCTTCTTCCGCTTCGTGGCCCGCCGCATCGACACCCGCCCCGAGGACTACGAGGGCGCCGAGATCAGCGACGGAGCAGGC
GAATTGGGCTTCTTCAGCCCGCACAGCTGGTGGCCGATCCTGATCGCGCTGTCGGGTTCGGTGGCCGCGGTGGGCATCGC
GCTGTGGTTGCCCTGGCTGATCGTGGCCGGGGTGATGTTCATCCTGTCGTCGGTCGCCGGGCTGGTCTTCGAGTACTACC
TGGGTCCTGAGAAGCACTGA

Upstream 100 bases:

>100_bases
GCGCTGCAGGCGATTGGTCAGTCCCCGGTGGCGGTGACCACGCACCCGTTCGACTCCAAGCGCGGTCAGTTGGCCGGAAG
CCAGTAGGTTAGGACACCAC

Downstream 100 bases:

>100_bases
TTCGCGGCATAAAGGTCACAATCCGATCACGTGATCGGCTGCGCAGTTCGCCACGGCGTCTCTGCCCCTTTGCGGTTGGG
TAGTGTTTTGCCCAGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLALIVATFFRFVARRIDTRPEDYEGAEISDGAG
ELGFFSPHSWWPILIALSGSVAAVGIALWLPWLIVAGVMFILSSVAGLVFEYYLGPEKH

Sequences:

>Translated_139_residues
MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLALIVATFFRFVARRIDTRPEDYEGAEISDGAG
ELGFFSPHSWWPILIALSGSVAAVGIALWLPWLIVAGVMFILSSVAGLVFEYYLGPEKH
>Mature_139_residues
MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLALIVATFFRFVARRIDTRPEDYEGAEISDGAG
ELGFFSPHSWWPILIALSGSVAAVGIALWLPWLIVAGVMFILSSVAGLVFEYYLGPEKH

Specific function: Part of cytochrome c oxidase, its function is unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX4_MYCPA (Q73YL6)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_960873.1
- EnsemblBacteria:   EBMYCT00000038921
- GeneID:   2721327
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP1939c
- NMPDR:   fig|262316.1.peg.1939
- GeneTree:   EBGT00050000017419
- HOGENOM:   HBG566773
- OMA:   GWVFEYY
- ProtClustDB:   CLSK872027
- BRENDA:   1.9.3.1
- InterPro:   IPR021050

Pfam domain/function: PF12270 Cyt_c_ox_IV

EC number: =1.9.3.1

Molecular weight: Translated: 15076; Mature: 15076

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf500a4c)-; HASH(0xc9a544c)-; HASH(0xf9951dc)-; HASH(0xef87260)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIDTRPEDYEGAEISDGAGELGFFSPHSWWPILIALSGSVAAVGIALWLPWLIVAGVMF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILSSVAGLVFEYYLGPEKH
HHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIDTRPEDYEGAEISDGAGELGFFSPHSWWPILIALSGSVAAVGIALWLPWLIVAGVMF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ILSSVAGLVFEYYLGPEKH
HHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA