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The map label for this gene is mmpS3

Identifier: 41408036

GI number: 41408036

Start: 2139525

End: 2140325

Strand: Reverse

Name: mmpS3

Synonym: MAP1938c

Alternate gene names: 41408036

Gene position: 2140325-2139525 (Counterclockwise)

Preceding gene: 41408037

Following gene: 41408035

Centisome position: 44.32

GC content: 68.91

Gene sequence:

>801_bases
ATGAGCGGGTCTAGACCCCCGGGATGGGAACCTGAGGAACCCGATCCTGCTGCCGACCCGATCGACCACCAGCCGGATCC
CGGCGGCCCGCCCGCCGACGAGTTCCCGGGTGAGGACTTCCCGGCCGGGGGAGATCACGAGGACGCGGTCGAACCCTTCG
ACGACAGCGTCGAATTCGACGCGGCCGACCAGACGGGTCAGACCGACGCCTACTCGCGGGCCTATTCGGCCCCGGAGTCC
GAGCATTTCACCAGCGGCCCCTACGTGCCGGCCGATCTGCGCCTGTACGACTACGACGACTACGACGAACCGGCCGAGCT
GGACGAGGAACACGGCACCGCCCGCTGGCCGTGGGTGGTCGGGGTGGCGGCCATCGTGGCCGCCATCGCGCTGGTGGTGT
CGGTGTCGCTGCTGTTCGCCCGGACCGACACCACCAAGCTGGCCAACCCGAACACCACCACCGCGTCCACGCCGCCGCTG
CAGGACGAGATCACCACCACCAAACCGCCGCCGCCCACCACCCCGACGGGTCCGCGCCAGGTCACCTACTCGGTGACCGG
CACCAAGGCCCCGGGCGACATCATCTCGGTGACCTACGTGGACGCGTCCGGCCGGCGGCGCACGCAGCACAACGTGTACA
TCCCGTGGTCGATGACGGTCACCCCGATCTCGCAATCGGATGTGGGCTCGGTCGAGGCGTCCAGCTTGTTCCGGGTCAGC
AGGCTCAACTGCTCGATCACCACCAGCGACGGAACGGTGCTCTCGTCGAACAGCAACGACGCGCCGCAGACGAGCTGCTG
A

Upstream 100 bases:

>100_bases
GCCCAGGCAAATGGGAAGTTTCCCGGCGCGCCCGCAATGAAGTGACCGCGGAGTTTTACGCGCAGGCGATGCAGTTCGAA
CAGGGTAGGCAAAGGCAGAG

Downstream 100 bases:

>100_bases
TGGTCAGCAGATATTCGGCATATCGGCGTGGGCTGGGCGACGACACCGTCTCGCCCGAGGTCATCGACCGCATCCTGATC
GGCGCCTGCGCCGCGATCTA

Product: MmpS3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSGSRPPGWEPEEPDPAADPIDHQPDPGGPPADEFPGEDFPAGGDHEDAVEPFDDSVEFDAADQTGQTDAYSRAYSAPES
EHFTSGPYVPADLRLYDYDDYDEPAELDEEHGTARWPWVVGVAAIVAAIALVVSVSLLFARTDTTKLANPNTTTASTPPL
QDEITTTKPPPPTTPTGPRQVTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRVS
RLNCSITTSDGTVLSSNSNDAPQTSC

Sequences:

>Translated_266_residues
MSGSRPPGWEPEEPDPAADPIDHQPDPGGPPADEFPGEDFPAGGDHEDAVEPFDDSVEFDAADQTGQTDAYSRAYSAPES
EHFTSGPYVPADLRLYDYDDYDEPAELDEEHGTARWPWVVGVAAIVAAIALVVSVSLLFARTDTTKLANPNTTTASTPPL
QDEITTTKPPPPTTPTGPRQVTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRVS
RLNCSITTSDGTVLSSNSNDAPQTSC
>Mature_265_residues
SGSRPPGWEPEEPDPAADPIDHQPDPGGPPADEFPGEDFPAGGDHEDAVEPFDDSVEFDAADQTGQTDAYSRAYSAPESE
HFTSGPYVPADLRLYDYDDYDEPAELDEEHGTARWPWVVGVAAIVAAIALVVSVSLLFARTDTTKLANPNTTTASTPPLQ
DEITTTKPPPPTTPTGPRQVTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRVSR
LNCSITTSDGTVLSSNSNDAPQTSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 28385; Mature: 28254

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSRPPGWEPEEPDPAADPIDHQPDPGGPPADEFPGEDFPAGGDHEDAVEPFDDSVEFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
AADQTGQTDAYSRAYSAPESEHFTSGPYVPADLRLYDYDDYDEPAELDEEHGTARWPWVV
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCEECHHHH
GVAAIVAAIALVVSVSLLFARTDTTKLANPNTTTASTPPLQDEITTTKPPPPTTPTGPRQ
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRVS
EEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHEEEE
RLNCSITTSDGTVLSSNSNDAPQTSC
ECEEEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
SGSRPPGWEPEEPDPAADPIDHQPDPGGPPADEFPGEDFPAGGDHEDAVEPFDDSVEFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
AADQTGQTDAYSRAYSAPESEHFTSGPYVPADLRLYDYDDYDEPAELDEEHGTARWPWVV
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCEECHHHH
GVAAIVAAIALVVSVSLLFARTDTTKLANPNTTTASTPPLQDEITTTKPPPPTTPTGPRQ
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRVS
EEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHEEEE
RLNCSITTSDGTVLSSNSNDAPQTSC
ECEEEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]