Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408035

Identifier: 41408035

GI number: 41408035

Start: 2138893

End: 2139525

Strand: Reverse

Name: 41408035

Synonym: MAP1937c

Alternate gene names: NA

Gene position: 2139525-2138893 (Counterclockwise)

Preceding gene: 41408036

Following gene: 41408034

Centisome position: 44.3

GC content: 71.25

Gene sequence:

>633_bases
ATGGTCAGCAGATATTCGGCATATCGGCGTGGGCTGGGCGACGACACCGTCTCGCCCGAGGTCATCGACCGCATCCTGAT
CGGCGCCTGCGCCGCGATCTACCTGGCGTTGTTGGGCGTCAGCGTGGCGGCCTGCGTTGCGCTGGCGGACCTGGGCAGGG
GATTTCACAAGGCGGCCAGCAGCCCGCACACCACCTGGGTGCTGTACGCCGTCATCATCGTCTCCGCGTTGATCATCGCG
GGGGCCATCCCGATCCTGTTGCGGGCCCGCCGGATATCGCAGGCCGAGCCGACGGCCCGGGCGATGACGGCACCGGCACG
ACCCCCGGTGCGGCTGGGCGCCGGCGTCGCGCGGCCCGCGACCGAGCGGGCGCCGCACGCGCCGGCGACGACCCCGGACG
TGGGGTGGTCGGGCGAGGCGGTCGATCGAATCTGGTTGCGCGGCACCGTCATATTGACCGGCACCATGGGCGCGGCGCTG
ATCGCGGTCGCGACGGCGACCTATCTGATGGCGGTCGGTCACGACGGATCGTCCTGGGTGGGCTACGGATTCGCCGGGGT
GATCACCGCGGCGATGCCGGTGGTCGAGTGGCTGCACATCCGCCAGCTGCGCGGGGCGGTCGCCGAGCAGTAA

Upstream 100 bases:

>100_bases
CCAGCTTGTTCCGGGTCAGCAGGCTCAACTGCTCGATCACCACCAGCGACGGAACGGTGCTCTCGTCGAACAGCAACGAC
GCGCCGCAGACGAGCTGCTG

Downstream 100 bases:

>100_bases
CCGCCGTCGCGGCCGGGCCCCGGGTCACCTCGGCGATCCGGTCGGCCGCGGGTGGCGTAGCGTCGAGCGCGAGCGGTTTC
GTTGTCAGCGGTGCGCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA
GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL
IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ

Sequences:

>Translated_210_residues
MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA
GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL
IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ
>Mature_210_residues
MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA
GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL
IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21900; Mature: 21900

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAAS
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPHTTWVLYAVIIVSALIIAGAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCC
TERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAALIAVATATYLMAVGHDGSSWV
HHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCH
GYGFAGVITAAMPVVEWLHIRQLRGAVAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAAS
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPHTTWVLYAVIIVSALIIAGAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCC
TERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAALIAVATATYLMAVGHDGSSWV
HHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCH
GYGFAGVITAAMPVVEWLHIRQLRGAVAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]