| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408035
Identifier: 41408035
GI number: 41408035
Start: 2138893
End: 2139525
Strand: Reverse
Name: 41408035
Synonym: MAP1937c
Alternate gene names: NA
Gene position: 2139525-2138893 (Counterclockwise)
Preceding gene: 41408036
Following gene: 41408034
Centisome position: 44.3
GC content: 71.25
Gene sequence:
>633_bases ATGGTCAGCAGATATTCGGCATATCGGCGTGGGCTGGGCGACGACACCGTCTCGCCCGAGGTCATCGACCGCATCCTGAT CGGCGCCTGCGCCGCGATCTACCTGGCGTTGTTGGGCGTCAGCGTGGCGGCCTGCGTTGCGCTGGCGGACCTGGGCAGGG GATTTCACAAGGCGGCCAGCAGCCCGCACACCACCTGGGTGCTGTACGCCGTCATCATCGTCTCCGCGTTGATCATCGCG GGGGCCATCCCGATCCTGTTGCGGGCCCGCCGGATATCGCAGGCCGAGCCGACGGCCCGGGCGATGACGGCACCGGCACG ACCCCCGGTGCGGCTGGGCGCCGGCGTCGCGCGGCCCGCGACCGAGCGGGCGCCGCACGCGCCGGCGACGACCCCGGACG TGGGGTGGTCGGGCGAGGCGGTCGATCGAATCTGGTTGCGCGGCACCGTCATATTGACCGGCACCATGGGCGCGGCGCTG ATCGCGGTCGCGACGGCGACCTATCTGATGGCGGTCGGTCACGACGGATCGTCCTGGGTGGGCTACGGATTCGCCGGGGT GATCACCGCGGCGATGCCGGTGGTCGAGTGGCTGCACATCCGCCAGCTGCGCGGGGCGGTCGCCGAGCAGTAA
Upstream 100 bases:
>100_bases CCAGCTTGTTCCGGGTCAGCAGGCTCAACTGCTCGATCACCACCAGCGACGGAACGGTGCTCTCGTCGAACAGCAACGAC GCGCCGCAGACGAGCTGCTG
Downstream 100 bases:
>100_bases CCGCCGTCGCGGCCGGGCCCCGGGTCACCTCGGCGATCCGGTCGGCCGCGGGTGGCGTAGCGTCGAGCGCGAGCGGTTTC GTTGTCAGCGGTGCGCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ
Sequences:
>Translated_210_residues MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ >Mature_210_residues MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAASSPHTTWVLYAVIIVSALIIA GAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPATERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAAL IAVATATYLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLRGAVAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21900; Mature: 21900
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAAS CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPHTTWVLYAVIIVSALIIAGAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCC TERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAALIAVATATYLMAVGHDGSSWV HHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCH GYGFAGVITAAMPVVEWLHIRQLRGAVAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSRYSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVALADLGRGFHKAAS CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPHTTWVLYAVIIVSALIIAGAIPILLRARRISQAEPTARAMTAPARPPVRLGAGVARPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCC TERAPHAPATTPDVGWSGEAVDRIWLRGTVILTGTMGAALIAVATATYLMAVGHDGSSWV HHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCH GYGFAGVITAAMPVVEWLHIRQLRGAVAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]