| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408034
Identifier: 41408034
GI number: 41408034
Start: 2138267
End: 2138782
Strand: Reverse
Name: 41408034
Synonym: MAP1936c
Alternate gene names: NA
Gene position: 2138782-2138267 (Counterclockwise)
Preceding gene: 41408035
Following gene: 41408029
Centisome position: 44.28
GC content: 71.51
Gene sequence:
>516_bases GTGCACCCACCGGCAATGCGATTCCTCCTTTCGCCCGCCCGCGAAGGATGCCGACCGGGAAGGGCGCCGCACGTGGGTTC CGCAGCAAGACGCCGACGCGCCGATCCCGTCCGGCTGTCGGTGGGGTGCGAACTGGGCCGCGCCATCGACGGCGCCTGGT GGCCCCGCGCCGACCGCATCACCAACGAATTGCCCGAGCTGGTCGCGGTGCTCACCCCGCTGCTCGGTCAGATCGGCGCG ATCAACGTCAACTGGCCGCCGCTGCAGCGACCGCCGGACTTCAACTGGCCGGGCTGGGAACGCAAGCGCCAGCACGTGAT GACGCTGATCGGGGGAGACGCGCGGATCAACCTGCTGATCATCCCGTACGCGACCTACAGCGCGCTCGCGCGGATGGTGC TGCGCTGCGCAGCCGGGCTGCCTGTCGAGCCCCGGGACCGGGGCAAGCCGGCGTTCCTGACGGCCGGCTCGATCCTGCGG GCCGCCGAGCAACAACGCGTCGACAGCGCGCCCTGA
Upstream 100 bases:
>100_bases GGCCGGGCCCCGGGTCACCTCGGCGATCCGGTCGGCCGCGGGTGGCGTAGCGTCGAGCGCGAGCGGTTTCGTTGTCAGCG GTGCGCTACCGCGCTCGCGG
Downstream 100 bases:
>100_bases GGCTCACCGGGCCTCAGGGCGCGCTGCCGCGTCGCTAGTGCTGGCCGTCCTCGCCGTTGGTGGAGCCGTTGGTGGAGCCC ACGATGCTGTCCTGATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MHPPAMRFLLSPAREGCRPGRAPHVGSAARRRRADPVRLSVGCELGRAIDGAWWPRADRITNELPELVAVLTPLLGQIGA INVNWPPLQRPPDFNWPGWERKRQHVMTLIGGDARINLLIIPYATYSALARMVLRCAAGLPVEPRDRGKPAFLTAGSILR AAEQQRVDSAP
Sequences:
>Translated_171_residues MHPPAMRFLLSPAREGCRPGRAPHVGSAARRRRADPVRLSVGCELGRAIDGAWWPRADRITNELPELVAVLTPLLGQIGA INVNWPPLQRPPDFNWPGWERKRQHVMTLIGGDARINLLIIPYATYSALARMVLRCAAGLPVEPRDRGKPAFLTAGSILR AAEQQRVDSAP >Mature_171_residues MHPPAMRFLLSPAREGCRPGRAPHVGSAARRRRADPVRLSVGCELGRAIDGAWWPRADRITNELPELVAVLTPLLGQIGA INVNWPPLQRPPDFNWPGWERKRQHVMTLIGGDARINLLIIPYATYSALARMVLRCAAGLPVEPRDRGKPAFLTAGSILR AAEQQRVDSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18858; Mature: 18858
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPAMRFLLSPAREGCRPGRAPHVGSAARRRRADPVRLSVGCELGRAIDGAWWPRADRI CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHCCCCCCCHHHH TNELPELVAVLTPLLGQIGAINVNWPPLQRPPDFNWPGWERKRQHVMTLIGGDARINLLI HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE IPYATYSALARMVLRCAAGLPVEPRDRGKPAFLTAGSILRAAEQQRVDSAP ECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHPPAMRFLLSPAREGCRPGRAPHVGSAARRRRADPVRLSVGCELGRAIDGAWWPRADRI CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHCCCCCCCHHHH TNELPELVAVLTPLLGQIGAINVNWPPLQRPPDFNWPGWERKRQHVMTLIGGDARINLLI HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE IPYATYSALARMVLRCAAGLPVEPRDRGKPAFLTAGSILRAAEQQRVDSAP ECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA