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The map label for this gene is yfdE [C]

Identifier: 41407810

GI number: 41407810

Start: 1870265

End: 1871068

Strand: Direct

Name: yfdE [C]

Synonym: MAP1712

Alternate gene names: 41407810

Gene position: 1870265-1871068 (Clockwise)

Preceding gene: 41407808

Following gene: 41407811

Centisome position: 38.72

GC content: 69.65

Gene sequence:

>804_bases
ATGCAGCCCCTGATCGGTGTCACGGTGGTGTCGTTGGCCGTGAACCTGCCCGGTCCGCTGGCGGCGGCCCGGCTCGCCGA
ACTGGGTGCCGCGGTGACGAAGGTTGAGCCGACGGCGGGGGATCCGCTCGCCGCCGCCGCGCCCGACTGGTACGCGCATT
TGGTTGAGCACCAAGACGTGCTGACCCTGGACATCAAAGACGCGGCTGATCGCGCAAAGCTGGACGAGTTGCTGGCCGGC
GCGGATCTGTTGATCACCTCGATGCGGCCCTCGGCGCTGCATCGGTCAGGCCTGGCGCGCCCGCAGCAGAAGTTTCCGCG
GTTGTCGTTGATCGAGATCGTCGGGCATCACGGCGAGCGCGCCGAGACCCCGGGCCATGACCTGAACTACCAGGCGGTCC
AGGGCACGCTGACCCCGCCGCATATGCCGAAGGTGCCGATCGCCGATGTGCTCGGCGCCGAGCGCGCGGTGTCGAGCGCG
CTCGCGGCGCTGCTGCAAGCCGCGAAAGCGGGTGCGGGACAACGCTACCGCGTCGTGTTGGAGGAAGCCGCCGCCCGGGC
TGGCGATGCGGTGCGCTACGGGCTGATGGGGGAGGGCGCGGTGCTCGGCGGCGCCTACCCCGGATACGGCATCTACGCGT
CCGCCGACGGCTACGTCGCCCTTGGGGCGATCGAACCGCACTTTTCGCGCGCACGTGCGAGGTGTTCGGCGCCGACGGGA
GTCACGAAAGCCTGGGTGCGGCGTTCGCGGCCAAGACCACCGCCGAGCTGGAAGACCTTGCGCGGCATATGGATATTCCC
CTGA

Upstream 100 bases:

>100_bases
GGTCCACGCCGCTATGTTAGCGCCTGACCCAATTAGCTCTACGTTTGATCTATTTCCAATACATCTGTATCGTACGCTGG
GGAATGGAGGATGACGTTCT

Downstream 100 bases:

>100_bases
ACGAAGTGAGGTAGATATGTCCGAATTGTTTCCCGATTACCGTCCGCGTTGGGAGACCGACCAGCACCGCGAGCTGCGCA
AGCACGCCGCGGAGTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Co-A Racemase Conjectural; Far-Related Protein; Fatty Acid Co-A Racemase Related Protein; Acyl-CoA Transferase/Carnitine Dehydratase; 2-Methylacyl-CoA Racemase; L-Carnitine Dehydratase/Bile Acid-Inducible; Co A Transferase; Alpha Methylacyl-CoA Racemase; CoA-Transferase; CAIB/BAIF Family; Fatty Acid-CoA Racemase

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQPLIGVTVVSLAVNLPGPLAAARLAELGAAVTKVEPTAGDPLAAAAPDWYAHLVEHQDVLTLDIKDAADRAKLDELLAG
ADLLITSMRPSALHRSGLARPQQKFPRLSLIEIVGHHGERAETPGHDLNYQAVQGTLTPPHMPKVPIADVLGAERAVSSA
LAALLQAAKAGAGQRYRVVLEEAAARAGDAVRYGLMGEGAVLGGAYPGYGIYASADGYVALGAIEPHFSRARARCSAPTG
VTKAWVRRSRPRPPPSWKTLRGIWIFP

Sequences:

>Translated_267_residues
MQPLIGVTVVSLAVNLPGPLAAARLAELGAAVTKVEPTAGDPLAAAAPDWYAHLVEHQDVLTLDIKDAADRAKLDELLAG
ADLLITSMRPSALHRSGLARPQQKFPRLSLIEIVGHHGERAETPGHDLNYQAVQGTLTPPHMPKVPIADVLGAERAVSSA
LAALLQAAKAGAGQRYRVVLEEAAARAGDAVRYGLMGEGAVLGGAYPGYGIYASADGYVALGAIEPHFSRARARCSAPTG
VTKAWVRRSRPRPPPSWKTLRGIWIFP
>Mature_267_residues
MQPLIGVTVVSLAVNLPGPLAAARLAELGAAVTKVEPTAGDPLAAAAPDWYAHLVEHQDVLTLDIKDAADRAKLDELLAG
ADLLITSMRPSALHRSGLARPQQKFPRLSLIEIVGHHGERAETPGHDLNYQAVQGTLTPPHMPKVPIADVLGAERAVSSA
LAALLQAAKAGAGQRYRVVLEEAAARAGDAVRYGLMGEGAVLGGAYPGYGIYASADGYVALGAIEPHFSRARARCSAPTG
VTKAWVRRSRPRPPPSWKTLRGIWIFP

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI266458393, Length=246, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI266458397, Length=246, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI300863128, Length=250, Percent_Identity=27.6, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI300863124, Length=250, Percent_Identity=27.6, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI266456254, Length=246, Percent_Identity=29.2682926829268, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI42794625, Length=246, Percent_Identity=28.8617886178862, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87082093, Length=212, Percent_Identity=25.9433962264151, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32564160, Length=248, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585488, Length=266, Percent_Identity=27.8195488721804, Blast_Score=85, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28138; Mature: 28138

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLIGVTVVSLAVNLPGPLAAARLAELGAAVTKVEPTAGDPLAAAAPDWYAHLVEHQDV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHCCCCE
LTLDIKDAADRAKLDELLAGADLLITSMRPSALHRSGLARPQQKFPRLSLIEIVGHHGER
EEEECCCHHHHHHHHHHHCCCHHEEECCCHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCC
AETPGHDLNYQAVQGTLTPPHMPKVPIADVLGAERAVSSALAALLQAAKAGAGQRYRVVL
CCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EEAAARAGDAVRYGLMGEGAVLGGAYPGYGIYASADGYVALGAIEPHFSRARARCSAPTG
HHHHHHCCCCEEECCCCCCEEECCCCCCCCEEECCCCEEEEECCCHHHHHHHHHCCCCCC
VTKAWVRRSRPRPPPSWKTLRGIWIFP
HHHHHHHHCCCCCCCCCHHCCCEEECC
>Mature Secondary Structure
MQPLIGVTVVSLAVNLPGPLAAARLAELGAAVTKVEPTAGDPLAAAAPDWYAHLVEHQDV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHCCCCE
LTLDIKDAADRAKLDELLAGADLLITSMRPSALHRSGLARPQQKFPRLSLIEIVGHHGER
EEEECCCHHHHHHHHHHHCCCHHEEECCCHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCC
AETPGHDLNYQAVQGTLTPPHMPKVPIADVLGAERAVSSALAALLQAAKAGAGQRYRVVL
CCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EEAAARAGDAVRYGLMGEGAVLGGAYPGYGIYASADGYVALGAIEPHFSRARARCSAPTG
HHHHHHCCCCEEECCCCCCEEECCCCCCCCEEECCCCEEEEECCCHHHHHHHHHCCCCCC
VTKAWVRRSRPRPPPSWKTLRGIWIFP
HHHHHHHHCCCCCCCCCHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA