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The map label for this gene is yhfE [H]

Identifier: 41407787

GI number: 41407787

Start: 1849191

End: 1850426

Strand: Direct

Name: yhfE [H]

Synonym: MAP1689

Alternate gene names: 41407787

Gene position: 1849191-1850426 (Clockwise)

Preceding gene: 41407786

Following gene: 41407790

Centisome position: 38.29

GC content: 69.98

Gene sequence:

>1236_bases
GTGGGCCAGACCGCGGCCATGGCCGAGGCCGACCGCACGTGGATGGTGGACACGCTGCTGGCGCTGCTGCAGACCCCGAG
CCCGTCGGGGCGCACGGACGCGGTGATGCAGGTGATCGGCGACATCCTCGACGACTTCGGCGTGCCGTTCACGCTGACCC
GGCGCGGGGCGCTGACCGCCGAGCTGCCGGGGGAGTCGGCGACCACCGACCGCGCGCTGGTGGTGCACTCCGACACCATC
GGCTGCATGGTCCGCGGGCTCAAGGACAACGGCCGGCTGGAACTCGTTCCGGTCGGCACCTTCTCGGCCCGATTCGCCGC
GGGTGCACGGGTGCGCATCTTCATCGACGATCCCGAGGAGTTCATCACCGGCACGATCCTGCCGCTCAAGTCCAGCGGCC
ACGCGTTCGGCGACGAGATCGACACCCAACCCACGGGCTGGGAGCACGTCGAGGTTCGCATCGACCGCAAGGTGTCGTGC
CGGGACGACCTGGTCCGCCTCGGTCTGCAGATCGGTGATTTCGTCGCCCTGATCACCAGCCCCGAGCTGACCGCCGACGG
CTTCGTGGTCTCCCGGCATCTGGACGGCAAGGCGGGCGTGGCGATCGCGCTCGCCCTGGCCAAGAACTTCGCCGAGAACA
AGGTGGTGTTGCCGCATCGCACCACGATCATGGTCACCATCACCGAGGAGGTCGGTCACGGCGCCAGTCATGGTCTGCCG
CCGGACGTCGCCGAACTGATCTCCGTGGACAACGCGGTGTGCGCGCCCGGCCAGCACTCGCTGGAGGATGGGGTGACGAT
CCCGATGGCCGATATGCACGGCCCGTTCGACTACCACCTGACCCGCAAGTTGTGCCGGCTGGCCCAGGACCGGGGAATCC
CGTTCGCGCGCGACATCTTTCGCTATTACCGGTCCGACGCCGCCGCGGCGATCGAGGCGGGCGCGAACACCCGCGCCGCG
CTGGTCGGCTTCGGGCTCGACGGCAGCCACGGCTGGGAGCGCACCCACATCGATTCGCTGGAGGCCGCCTACAACCTGCT
GCACGCGTGGCTGCAGACGCCGTTGACGTTCGCCAAGTGGGACGCCAAGCCGACGGGGAGCCTGCGCGACTTCCCGTCCT
CGAAGCAGCCCGCACCCAGCGAGCGGTGGGTGCCGTTGTCGCGCGGCGACTACGAAAGCCCGGGGGACGCGTCGCCGGGG
ACGCACTGGCCGCCCTCGGAGGGGCCGCAGTCCTGA

Upstream 100 bases:

>100_bases
CGGGACGCGGCGTCCTAGCAGCGCTGCAGCCCGGGCCGGGGCCGCTCGCGTCGGGCACACGGTAGGTTGAACGCGATTCC
CAGACCGGAAAGGAGACGAG

Downstream 100 bases:

>100_bases
CGCGGGGCGCCCGGGGCGGTCAGCCGGCGCGGGCGATCCGGTCGGCGCGCCAGCACCGGGACTGCATCGGGATGTCGATC
GCGTGGGCCCCGGGGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MGQTAAMAEADRTWMVDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTAELPGESATTDRALVVHSDTI
GCMVRGLKDNGRLELVPVGTFSARFAAGARVRIFIDDPEEFITGTILPLKSSGHAFGDEIDTQPTGWEHVEVRIDRKVSC
RDDLVRLGLQIGDFVALITSPELTADGFVVSRHLDGKAGVAIALALAKNFAENKVVLPHRTTIMVTITEEVGHGASHGLP
PDVAELISVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQDRGIPFARDIFRYYRSDAAAAIEAGANTRAA
LVGFGLDGSHGWERTHIDSLEAAYNLLHAWLQTPLTFAKWDAKPTGSLRDFPSSKQPAPSERWVPLSRGDYESPGDASPG
THWPPSEGPQS

Sequences:

>Translated_411_residues
MGQTAAMAEADRTWMVDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTAELPGESATTDRALVVHSDTI
GCMVRGLKDNGRLELVPVGTFSARFAAGARVRIFIDDPEEFITGTILPLKSSGHAFGDEIDTQPTGWEHVEVRIDRKVSC
RDDLVRLGLQIGDFVALITSPELTADGFVVSRHLDGKAGVAIALALAKNFAENKVVLPHRTTIMVTITEEVGHGASHGLP
PDVAELISVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQDRGIPFARDIFRYYRSDAAAAIEAGANTRAA
LVGFGLDGSHGWERTHIDSLEAAYNLLHAWLQTPLTFAKWDAKPTGSLRDFPSSKQPAPSERWVPLSRGDYESPGDASPG
THWPPSEGPQS
>Mature_410_residues
GQTAAMAEADRTWMVDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTAELPGESATTDRALVVHSDTIG
CMVRGLKDNGRLELVPVGTFSARFAAGARVRIFIDDPEEFITGTILPLKSSGHAFGDEIDTQPTGWEHVEVRIDRKVSCR
DDLVRLGLQIGDFVALITSPELTADGFVVSRHLDGKAGVAIALALAKNFAENKVVLPHRTTIMVTITEEVGHGASHGLPP
DVAELISVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQDRGIPFARDIFRYYRSDAAAAIEAGANTRAAL
VGFGLDGSHGWERTHIDSLEAAYNLLHAWLQTPLTFAKWDAKPTGSLRDFPSSKQPAPSERWVPLSRGDYESPGDASPGT
HWPPSEGPQS

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 44329; Mature: 44198

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTAAMAEADRTWMVDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTA
CCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
ELPGESATTDRALVVHSDTIGCMVRGLKDNGRLELVPVGTFSARFAAGARVRIFIDDPEE
ECCCCCCCCCCEEEEECCCCEEHEECCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCHH
FITGTILPLKSSGHAFGDEIDTQPTGWEHVEVRIDRKVSCRDDLVRLGLQIGDFVALITS
HHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEC
PELTADGFVVSRHLDGKAGVAIALALAKNFAENKVVLPHRTTIMVTITEEVGHGASHGLP
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEEEEEHHHCCCCCCCCC
PDVAELISVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQDRGIPFARDIF
HHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
RYYRSDAAAAIEAGANTRAALVGFGLDGSHGWERTHIDSLEAAYNLLHAWLQTPLTFAKW
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
DAKPTGSLRDFPSSKQPAPSERWVPLSRGDYESPGDASPGTHWPPSEGPQS
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQTAAMAEADRTWMVDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTA
CCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
ELPGESATTDRALVVHSDTIGCMVRGLKDNGRLELVPVGTFSARFAAGARVRIFIDDPEE
ECCCCCCCCCCEEEEECCCCEEHEECCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCHH
FITGTILPLKSSGHAFGDEIDTQPTGWEHVEVRIDRKVSCRDDLVRLGLQIGDFVALITS
HHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEC
PELTADGFVVSRHLDGKAGVAIALALAKNFAENKVVLPHRTTIMVTITEEVGHGASHGLP
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEEEEEHHHCCCCCCCCC
PDVAELISVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQDRGIPFARDIF
HHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
RYYRSDAAAAIEAGANTRAALVGFGLDGSHGWERTHIDSLEAAYNLLHAWLQTPLTFAKW
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
DAKPTGSLRDFPSSKQPAPSERWVPLSRGDYESPGDASPGTHWPPSEGPQS
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]