| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pgsA2
Identifier: 41407633
GI number: 41407633
Start: 1687021
End: 1687662
Strand: Direct
Name: pgsA2
Synonym: MAP1535
Alternate gene names: 41407633
Gene position: 1687021-1687662 (Clockwise)
Preceding gene: 41407632
Following gene: 41407634
Centisome position: 34.93
GC content: 69.47
Gene sequence:
>642_bases ATGTCACGGCACATGGAGCCGGTGCTTCCACCCAACCGGGTGCTGACGGTGCCCAACGCGCTCAGCGCGATCCGCCTGGC GCTCGTCCCCGTGTTCGTCTACGCGTTGCTGGTCGCCCACGCCAACGGGTGGGCGGTGGCGATCCTGATGTTCAGCGGCG CCTCGGACTGGGCCGACGGCAAAATCGCCCGGCTGCTCAACCAGTCCTCGCGGCTGGGTGTGCTGCTCGACCCCGCGGTG GACCGCCTCTACATGGTGGTCGTGCCCGTGGTCCTGGCGTTGAGCGGCATCGTGCCGTGGTGGTTCGTCGTGGTCCTGCT CGTCCGCGACGGCCTGTTGGCCGCCACGCTGCCGCTGCTGTGGAGCCGCGGCCTGTCGGCGCTGCCGGTGACCTACATCG GCAAGGCGGCGATGTTCGCGTTGATGTCCGGGTTCCCGCTGGTGCTGTTGGGCACCTGGGACGCGTTGTGGAGCCGGGTG GTGGGCGCCTGCGGCTGGGCCTTCCTGATCTGGGGCCTGTACGCGTACCTGTGGGCGTTCGCGCAGTACGCGGTGCAGAT GACGCTGGTGGTGCGCCGGATGCCCAAGGTCGATCGCGCGGCACGCCCGTCGACCATGGCGAAGGTCGTCGACCATGGCT GA
Upstream 100 bases:
>100_bases CAACCCGCTGTCGGACGACACGCTGTCCACCCTGAGCCTGCCCGGGGTGTTCCGCTAGCCGGTGCGCGGCCAGCCGCGCA CGGGGCGCCGCGCTTGGCTA
Downstream 100 bases:
>100_bases CGTGGACCGCGCGCTCGGCGGCTATGACCCCAACGCCGGTCACAGCGCGCACCTAGCGGCGCGCCCGCAGCGGATTCCGG TGCCCTCGCTGCTGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSRHMEPVLPPNRVLTVPNALSAIRLALVPVFVYALLVAHANGWAVAILMFSGASDWADGKIARLLNQSSRLGVLLDPAV DRLYMVVVPVVLALSGIVPWWFVVVLLVRDGLLAATLPLLWSRGLSALPVTYIGKAAMFALMSGFPLVLLGTWDALWSRV VGACGWAFLIWGLYAYLWAFAQYAVQMTLVVRRMPKVDRAARPSTMAKVVDHG
Sequences:
>Translated_213_residues MSRHMEPVLPPNRVLTVPNALSAIRLALVPVFVYALLVAHANGWAVAILMFSGASDWADGKIARLLNQSSRLGVLLDPAV DRLYMVVVPVVLALSGIVPWWFVVVLLVRDGLLAATLPLLWSRGLSALPVTYIGKAAMFALMSGFPLVLLGTWDALWSRV VGACGWAFLIWGLYAYLWAFAQYAVQMTLVVRRMPKVDRAARPSTMAKVVDHG >Mature_212_residues SRHMEPVLPPNRVLTVPNALSAIRLALVPVFVYALLVAHANGWAVAILMFSGASDWADGKIARLLNQSSRLGVLLDPAVD RLYMVVVPVVLALSGIVPWWFVVVLLVRDGLLAATLPLLWSRGLSALPVTYIGKAAMFALMSGFPLVLLGTWDALWSRVV GACGWAFLIWGLYAYLWAFAQYAVQMTLVVRRMPKVDRAARPSTMAKVVDHG
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 23293; Mature: 23162
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHMEPVLPPNRVLTVPNALSAIRLALVPVFVYALLVAHANGWAVAILMFSGASDWADG CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH KIARLLNQSSRLGVLLDPAVDRLYMVVVPVVLALSGIVPWWFVVVLLVRDGLLAATLPLL HHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH WSRGLSALPVTYIGKAAMFALMSGFPLVLLGTWDALWSRVVGACGWAFLIWGLYAYLWAF HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQYAVQMTLVVRRMPKVDRAARPSTMAKVVDHG HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCC >Mature Secondary Structure SRHMEPVLPPNRVLTVPNALSAIRLALVPVFVYALLVAHANGWAVAILMFSGASDWADG CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH KIARLLNQSSRLGVLLDPAVDRLYMVVVPVVLALSGIVPWWFVVVLLVRDGLLAATLPLL HHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH WSRGLSALPVTYIGKAAMFALMSGFPLVLLGTWDALWSRVVGACGWAFLIWGLYAYLWAF HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQYAVQMTLVVRRMPKVDRAARPSTMAKVVDHG HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]