| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407634
Identifier: 41407634
GI number: 41407634
Start: 1687655
End: 1688581
Strand: Direct
Name: 41407634
Synonym: MAP1536
Alternate gene names: NA
Gene position: 1687655-1688581 (Clockwise)
Preceding gene: 41407633
Following gene: 41407635
Centisome position: 34.94
GC content: 72.49
Gene sequence:
>927_bases ATGGCTGACGTGGACCGCGCGCTCGGCGGCTATGACCCCAACGCCGGTCACAGCGCGCACCTAGCGGCGCGCCCGCAGCG GATTCCGGTGCCCTCGCTGCTGCGCGCCCTGCTCTCCGAGCATCTGGATCCCGGCTACGCCGCGGCGGCGGCCAAACGCG GCGCCGTCGACGAAACGCGCAACCGGCGCCCGCGGGTGTCCGGCTGGCTGTGGCAGGCGCTGGCGGCGCTGCTGATCGCC ACCGTCTTCGCCGCCGCGGTCGCCCAGGCCCGCTCGGTGGCCCCCGGCGTGCGCAGCGCGCAGCAGCTGCTGCTGGGCAA TGTGCGGGCCACGGAAGGCTCGGCGGCGAAGTTGGCGCAGCGGCGCAACGAGCTGTCAGCGAAGGTCGACGACGTGCAGC GGCACGCCCTAGCCGACGACGCCGAGGGGCAGCGGCTGCTCAAACGCCTCGACGCGCTCGGCCTGGCGGCGGCCAGCACG GCGGTGATCGGCCCCGGCCTGAAGGTCACGGTGACCGATCCGGGCGCCGGGCCGAACCTTTCCGACGTGTCCAAGCAGCG GGTCAGCGGCAGCAGGCAGATCATCTTGGACCGCGACCTGCAGCTGGTGGTCAACTCGTTGTGGGCCGGCGGCGCCGAGG CCGTCTCGGTCGGCGGCGTGCGGATCGGCCCGACCGTGACCATCCGGCAGGCCGGCGGCGCGATCCTGGTGGACAACAAC CCGACCAGCAGCCCCTACACGATCCTGGCGATCGGGCCGCCGCACGCGCTGCGCGACGCCTTCGACACCAGCCCGGGGAT GCAGCGGCTGAGGCTGCTGCAGATCTCCTACGGCGTGGTGGTTACCGTGGATGTCGCCGACGGACTAACGCTGCCTGCCG GATCGGTCCGGGATGTCAAGTTCGCCAAGCAGATTGGGCCACAGTGA
Upstream 100 bases:
>100_bases GCGTTCGCGCAGTACGCGGTGCAGATGACGCTGGTGGTGCGCCGGATGCCCAAGGTCGATCGCGCGGCACGCCCGTCGAC CATGGCGAAGGTCGTCGACC
Downstream 100 bases:
>100_bases GAAGAATCCCGAACAGCTTCCCATTCCGGTTTCCCTTCCGGCGCGACACGGGAAGCCGCGCATGATCGGTATCGCGGCAC TGGCGATCGGCATCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MADVDRALGGYDPNAGHSAHLAARPQRIPVPSLLRALLSEHLDPGYAAAAAKRGAVDETRNRRPRVSGWLWQALAALLIA TVFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQRRNELSAKVDDVQRHALADDAEGQRLLKRLDALGLAAAST AVIGPGLKVTVTDPGAGPNLSDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVTIRQAGGAILVDNN PTSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISYGVVVTVDVADGLTLPAGSVRDVKFAKQIGPQ
Sequences:
>Translated_308_residues MADVDRALGGYDPNAGHSAHLAARPQRIPVPSLLRALLSEHLDPGYAAAAAKRGAVDETRNRRPRVSGWLWQALAALLIA TVFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQRRNELSAKVDDVQRHALADDAEGQRLLKRLDALGLAAAST AVIGPGLKVTVTDPGAGPNLSDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVTIRQAGGAILVDNN PTSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISYGVVVTVDVADGLTLPAGSVRDVKFAKQIGPQ >Mature_307_residues ADVDRALGGYDPNAGHSAHLAARPQRIPVPSLLRALLSEHLDPGYAAAAAKRGAVDETRNRRPRVSGWLWQALAALLIAT VFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQRRNELSAKVDDVQRHALADDAEGQRLLKRLDALGLAAASTA VIGPGLKVTVTDPGAGPNLSDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVTIRQAGGAILVDNNP TSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISYGVVVTVDVADGLTLPAGSVRDVKFAKQIGPQ
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 32092; Mature: 31961
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVDRALGGYDPNAGHSAHLAARPQRIPVPSLLRALLSEHLDPGYAAAAAKRGAVDETR CCCHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH NRRPRVSGWLWQALAALLIATVFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRNELSAKVDDVQRHALADDAEGQRLLKRLDALGLAAASTAVIGPGLKVTVTDPGAGPNL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCH SDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVTIRQAGGAILVDNN HHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCEEECCEEEEEECCCEEEECCC PTSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISYGVVVTVDVADGLTLPAGSVRDVK CCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCHHHH FAKQIGPQ HHHHCCCC >Mature Secondary Structure ADVDRALGGYDPNAGHSAHLAARPQRIPVPSLLRALLSEHLDPGYAAAAAKRGAVDETR CCHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH NRRPRVSGWLWQALAALLIATVFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRNELSAKVDDVQRHALADDAEGQRLLKRLDALGLAAASTAVIGPGLKVTVTDPGAGPNL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCH SDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVTIRQAGGAILVDNN HHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCEEECCEEEEEECCCEEEECCC PTSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISYGVVVTVDVADGLTLPAGSVRDVK CCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCHHHH FAKQIGPQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]