| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 41407229
GI number: 41407229
Start: 1185892
End: 1186377
Strand: Direct
Name: marR [C]
Synonym: MAP1131
Alternate gene names: 41407229
Gene position: 1185892-1186377 (Clockwise)
Preceding gene: 41407228
Following gene: 41407231
Centisome position: 24.55
GC content: 72.43
Gene sequence:
>486_bases ATGGCCGCGGACCACACCACGGTTGACGAGTCGCTGGACGCGATCACCGACGCTTTGCTCACGGCCTCCCGTTTGCTGAT GGCCATCTCGGCCCGCTCGGTCGGGCAGGTCGACGAGACCATCACCATCCCGCAGTTCCGGACCCTGGTCATCCTGTCCA ACCGCGGCCCGGTCAACCTGGCCACCCTGGCCGGGCTGCTGGGTGTGCAACCGTCGGCCACCGGGCGGATGGTGGACCGG TTGGTGGCCGCGGGGCTGATCGACCGCCTGCCGCACCCGACCTCACGGCGCGAGCTGCTCGCCGCGCTGACCACCCGCGG CCGCGACGTCGTGCACCAGGTCACCGCGCACCGGCGCGCCGAGATCGCGGCCATCGTGGCGAAGATGCCGCCCGCGGAGC GGCACGGCCTGGTGCGCGCGCTGACCGCCTTCACCGCTGCCGGGGGCGAGCCCGACGTCCACCTGGACGCCGAGATCGAC CTGTAA
Upstream 100 bases:
>100_bases AGTATGCGCATGCAATAATCACTGTTTACGACATTAGAAGGTTGCTACACTTTCTTTCCTTCGCCGCCGATAGGCCGGAG ACCATCCCGAGAGGGGCGAT
Downstream 100 bases:
>100_bases ACCGTTCAGCCGCTTCGCTTTTCGGCGGTGACGAGCAGGTACTCCCAGCCCATGGTGCCGTCGCTGAGGTGCTGCGCGGC GAGTTCGACGAGCTGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulatory Protein; Regulatory Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNLATLAGLLGVQPSATGRMVDR LVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIVAKMPPAERHGLVRALTAFTAAGGEPDVHLDAEID L
Sequences:
>Translated_161_residues MAADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNLATLAGLLGVQPSATGRMVDR LVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIVAKMPPAERHGLVRALTAFTAAGGEPDVHLDAEID L >Mature_160_residues AADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNLATLAGLLGVQPSATGRMVDRL VAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIVAKMPPAERHGLVRALTAFTAAGGEPDVHLDAEIDL
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17075; Mature: 16944
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCHH ATLAGLLGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH EIAAIVAKMPPAERHGLVRALTAFTAAGGEPDVHLDAEIDL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure AADHTTVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCHH ATLAGLLGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH EIAAIVAKMPPAERHGLVRALTAFTAAGGEPDVHLDAEIDL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA