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The map label for this gene is 41407227

Identifier: 41407227

GI number: 41407227

Start: 1182921

End: 1183712

Strand: Direct

Name: 41407227

Synonym: MAP1129

Alternate gene names: NA

Gene position: 1182921-1183712 (Clockwise)

Preceding gene: 41407224

Following gene: 41407228

Centisome position: 24.49

GC content: 71.21

Gene sequence:

>792_bases
ATGGAGGTACCGTACGCACCCCGTCTGGTCGCCGGCGCCTGGGTGGTGGCCGGCTGGGTGGCCCTGGCTTACGGCATCTA
TCTGACCGTGCTGGCGCTGCGCTCCCCGCCGGGGGTGGAGCTGACCGGGCACTGGGTGTTGCAGCCGGCGTTCAAGGCCT
CGATGGCGTTGCTGCTGACGCTGGCCGCCGCCGGGCACGGACAGGTGCGGGAGCGGCGCTGGCTGATGCCGGCGCTGCTG
CTGTCGGCGGTCGGCGACTGGGTGCTCGCCCTGCCGTGGTGGACGCTGTCCTTCCTGGTCGGCCTGGCGGCGTTTCTGTT
CGCGCCCATGTGTTTCATCGGCGTCCTGCTGCCGCTGGTCCCGCTGCCCTCCGGCGCGTCCGGGCCCGGTCGGCCGTCGA
CGCCGCGGATCGCCGCGGCGGTCCTGATGTGCCTGGCGTCGATCGGGTTGCTGGTCTGGTTCTGGCCGCGTCTGGGTCCG
GACAAGCTGACGCTGCCGGTCACGCTGTACATCGTGGTGCTGACCGCCATGGTGTGCGCGGCGCTGCTGGCGAAACTGCC
GACGATCTGGACGGCGGTGGGCGCGGTGTGTTTCGCGGCGTCGGACTCAATGATCGCCATCGGCCGGTTCATCCTGGGCA
ACGAGGCGCTGGCGGTGCCGATCTGGTGGGCGTACGCGGCGGCCCAGATCCTGATCACCGCGGGATTCTTCTTCGGTCGC
GAAGCGGCCGGCGACGCGGCCGGCGAAGCGACCGGCGACGCGACCGGTGATGCCGCGGAACCTGTTGAGTAG

Upstream 100 bases:

>100_bases
TCCGTCCTCGGTGGATAGCCGGAAGGGAACCGCATCCAGTACCTTCTGCAGGATGGGGTCGATCCCGGGTTTCTCGTCGG
CAGGGTTGTCCAAGCGGGGC

Downstream 100 bases:

>100_bases
CAACGTGTTTCGCGGCCCGGGGCGGCCGTGAGCCCGGGTCCGCGCACGCCGGTCGAGGTGGAACCCATCGCCCGGGTGCT
GCCGATGCTGTCGGTGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEVPYAPRLVAGAWVVAGWVALAYGIYLTVLALRSPPGVELTGHWVLQPAFKASMALLLTLAAAGHGQVRERRWLMPALL
LSAVGDWVLALPWWTLSFLVGLAAFLFAPMCFIGVLLPLVPLPSGASGPGRPSTPRIAAAVLMCLASIGLLVWFWPRLGP
DKLTLPVTLYIVVLTAMVCAALLAKLPTIWTAVGAVCFAASDSMIAIGRFILGNEALAVPIWWAYAAAQILITAGFFFGR
EAAGDAAGEATGDATGDAAEPVE

Sequences:

>Translated_263_residues
MEVPYAPRLVAGAWVVAGWVALAYGIYLTVLALRSPPGVELTGHWVLQPAFKASMALLLTLAAAGHGQVRERRWLMPALL
LSAVGDWVLALPWWTLSFLVGLAAFLFAPMCFIGVLLPLVPLPSGASGPGRPSTPRIAAAVLMCLASIGLLVWFWPRLGP
DKLTLPVTLYIVVLTAMVCAALLAKLPTIWTAVGAVCFAASDSMIAIGRFILGNEALAVPIWWAYAAAQILITAGFFFGR
EAAGDAAGEATGDATGDAAEPVE
>Mature_263_residues
MEVPYAPRLVAGAWVVAGWVALAYGIYLTVLALRSPPGVELTGHWVLQPAFKASMALLLTLAAAGHGQVRERRWLMPALL
LSAVGDWVLALPWWTLSFLVGLAAFLFAPMCFIGVLLPLVPLPSGASGPGRPSTPRIAAAVLMCLASIGLLVWFWPRLGP
DKLTLPVTLYIVVLTAMVCAALLAKLPTIWTAVGAVCFAASDSMIAIGRFILGNEALAVPIWWAYAAAQILITAGFFFGR
EAAGDAAGEATGDATGDAAEPVE

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 27633; Mature: 27633

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVPYAPRLVAGAWVVAGWVALAYGIYLTVLALRSPPGVELTGHWVLQPAFKASMALLLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHHHHHH
LAAAGHGQVRERRWLMPALLLSAVGDWVLALPWWTLSFLVGLAAFLFAPMCFIGVLLPLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLPSGASGPGRPSTPRIAAAVLMCLASIGLLVWFWPRLGPDKLTLPVTLYIVVLTAMVCA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ALLAKLPTIWTAVGAVCFAASDSMIAIGRFILGNEALAVPIWWAYAAAQILITAGFFFGR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
EAAGDAAGEATGDATGDAAEPVE
HHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEVPYAPRLVAGAWVVAGWVALAYGIYLTVLALRSPPGVELTGHWVLQPAFKASMALLLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHHHHHH
LAAAGHGQVRERRWLMPALLLSAVGDWVLALPWWTLSFLVGLAAFLFAPMCFIGVLLPLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLPSGASGPGRPSTPRIAAAVLMCLASIGLLVWFWPRLGPDKLTLPVTLYIVVLTAMVCA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ALLAKLPTIWTAVGAVCFAASDSMIAIGRFILGNEALAVPIWWAYAAAQILITAGFFFGR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
EAAGDAAGEATGDATGDAAEPVE
HHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]