Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is yceG [C]

Identifier: 41407177

GI number: 41407177

Start: 1132346

End: 1133593

Strand: Direct

Name: yceG [C]

Synonym: MAP1079

Alternate gene names: 41407177

Gene position: 1132346-1133593 (Clockwise)

Preceding gene: 41407176

Following gene: 41407178

Centisome position: 23.45

GC content: 70.83

Gene sequence:

>1248_bases
ATGGTTGACAGCGCCCGCCGCGAGCGCGCCGAGCCCGAGGCGGTGGGGCCGCCGCGGCGCAGATCCAGCCGGATGGCCCG
GAACAGGGCCGAGCGGGGCCGGCGCCGGCGGCGCTTCGCCCTGCGCGCCGCCCTGGCGCTGCTGGTCGTGGTGGTGCTGG
CCGGGGTGTTCGCCGGCGGCAAGCTGTGGCACACCGTGTTCGGGCCGGGCGACGACTACAGCGGCAGCGGCAAGCGCGAC
CTGGTGATCCAGATCCAGGCCGGCGACTCCACCACCATGGTCGGCGAGACGCTGCACAACCAGCACGTGGTCAAGACGGT
GCGGGCGTTCGTCAACGCCGCGCACGGCAACAGCAAGATCGACTCCATCCAGCCCGGCTTCTACCGGATGCGCACCGAGA
TCCCGGCCTCCGACGCCGTCGCCCGGCTGGCCGACCCCAACAGCCGGGTGGGCCGGCTGGTCATCCCGGAGGGCCGTCAG
CTCGACGACACCACCGACATGAAGACCAACAAGGTCAACCCCGGCATCTTCACCCTGATCTCCCAGGCCACCTGCGTGGA
CCTGGACGGCAACCGGCGCTGCGTGCCGGTGCAGCAGCTGCGCGCGGCCGCGACCAACAGCACCACCGCGGCGCTGTCGG
TGCCGCCGTGGGCGCTGGAACCGGTCAACGAGCTGGGCAGGGACCATCGCCGGATCGAGGGGCTGATCGCGCCGGGCACC
TTCAACGTCGACCCGTCGGCGTCCCCGGAGAGCATCCTGGCCGGGCTGATCAGCGCCGGGGCCGAGGAGTACCTGAAGTC
CGGGCTGGTGGACACCGCCCAGGCGATGGGCCTGTCGCCCTACGACATCCTGGTGGTGGCGTCGCTGGTGCAGCAGGAAT
CCAACACCCCGGACTTCGCCAAGGTCGCGCAGGTGATCTACAACCGGCTGCACGCCCACCACACGCTGGAATTCGACTCG
ACGGTCAACTACCCGCTGGACCGCCGCGAGGTGGCCACCAGCGACGCCGACCGGGGCCAGAAGACGCCGTGGAACACCTA
CGTGTCGCAGGGCCTGCCGGCCACCGCGATCTGTTCGCCCGGCATCGACGCGCTGCACGCCGCCGAGCACCCCGCGCCGG
GGGACTGGCTCTACTTCGTCACCATCGACGCCGCCGGGACGACGCTGTTCACCAAGGACTATCAGCAGCACCTGGCCAAC
ATCGAGCTGGCTAAGCACAACGGTGTCCTCGACAGCACCCCCCGCTAG

Upstream 100 bases:

>100_bases
CGCGCCAAGGAACAGCGCGCGGTGATCGACCAGGCGGCGGCGGTGGCCATCCTGCAGAGCTGGCTGGACCAGCGCCGCGC
GGCGACCCGGGAGGCCGGCG

Downstream 100 bases:

>100_bases
CGCGGGGCCCCGCAGGGCGGCCGTGCTGGGCAAGCCGATCGGCCACTCGAAATCCCCGCAGCTGCACCTGGCCGCCTACC
GTGCGCTGGGCCTGCACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVDSARRERAEPEAVGPPRRRSSRMARNRAERGRRRRRFALRAALALLVVVVLAGVFAGGKLWHTVFGPGDDYSGSGKRD
LVIQIQAGDSTTMVGETLHNQHVVKTVRAFVNAAHGNSKIDSIQPGFYRMRTEIPASDAVARLADPNSRVGRLVIPEGRQ
LDDTTDMKTNKVNPGIFTLISQATCVDLDGNRRCVPVQQLRAAATNSTTAALSVPPWALEPVNELGRDHRRIEGLIAPGT
FNVDPSASPESILAGLISAGAEEYLKSGLVDTAQAMGLSPYDILVVASLVQQESNTPDFAKVAQVIYNRLHAHHTLEFDS
TVNYPLDRREVATSDADRGQKTPWNTYVSQGLPATAICSPGIDALHAAEHPAPGDWLYFVTIDAAGTTLFTKDYQQHLAN
IELAKHNGVLDSTPR

Sequences:

>Translated_415_residues
MVDSARRERAEPEAVGPPRRRSSRMARNRAERGRRRRRFALRAALALLVVVVLAGVFAGGKLWHTVFGPGDDYSGSGKRD
LVIQIQAGDSTTMVGETLHNQHVVKTVRAFVNAAHGNSKIDSIQPGFYRMRTEIPASDAVARLADPNSRVGRLVIPEGRQ
LDDTTDMKTNKVNPGIFTLISQATCVDLDGNRRCVPVQQLRAAATNSTTAALSVPPWALEPVNELGRDHRRIEGLIAPGT
FNVDPSASPESILAGLISAGAEEYLKSGLVDTAQAMGLSPYDILVVASLVQQESNTPDFAKVAQVIYNRLHAHHTLEFDS
TVNYPLDRREVATSDADRGQKTPWNTYVSQGLPATAICSPGIDALHAAEHPAPGDWLYFVTIDAAGTTLFTKDYQQHLAN
IELAKHNGVLDSTPR
>Mature_415_residues
MVDSARRERAEPEAVGPPRRRSSRMARNRAERGRRRRRFALRAALALLVVVVLAGVFAGGKLWHTVFGPGDDYSGSGKRD
LVIQIQAGDSTTMVGETLHNQHVVKTVRAFVNAAHGNSKIDSIQPGFYRMRTEIPASDAVARLADPNSRVGRLVIPEGRQ
LDDTTDMKTNKVNPGIFTLISQATCVDLDGNRRCVPVQQLRAAATNSTTAALSVPPWALEPVNELGRDHRRIEGLIAPGT
FNVDPSASPESILAGLISAGAEEYLKSGLVDTAQAMGLSPYDILVVASLVQQESNTPDFAKVAQVIYNRLHAHHTLEFDS
TVNYPLDRREVATSDADRGQKTPWNTYVSQGLPATAICSPGIDALHAAEHPAPGDWLYFVTIDAAGTTLFTKDYQQHLAN
IELAKHNGVLDSTPR

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=339, Percent_Identity=25.9587020648968, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 45075; Mature: 45075

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSARRERAEPEAVGPPRRRSSRMARNRAERGRRRRRFALRAALALLVVVVLAGVFAGG
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLWHTVFGPGDDYSGSGKRDLVIQIQAGDSTTMVGETLHNQHVVKTVRAFVNAAHGNSKI
CEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSIQPGFYRMRTEIPASDAVARLADPNSRVGRLVIPEGRQLDDTTDMKTNKVNPGIFTLI
CCCCCCHHHHEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
SQATCVDLDGNRRCVPVQQLRAAATNSTTAALSVPPWALEPVNELGRDHRRIEGLIAPGT
CCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEECCCC
FNVDPSASPESILAGLISAGAEEYLKSGLVDTAQAMGLSPYDILVVASLVQQESNTPDFA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
KVAQVIYNRLHAHHTLEFDSTVNYPLDRREVATSDADRGQKTPWNTYVSQGLPATAICSP
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCC
GIDALHAAEHPAPGDWLYFVTIDAAGTTLFTKDYQQHLANIELAKHNGVLDSTPR
CCHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHCEEEHHCCCCCCCCCC
>Mature Secondary Structure
MVDSARRERAEPEAVGPPRRRSSRMARNRAERGRRRRRFALRAALALLVVVVLAGVFAGG
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLWHTVFGPGDDYSGSGKRDLVIQIQAGDSTTMVGETLHNQHVVKTVRAFVNAAHGNSKI
CEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSIQPGFYRMRTEIPASDAVARLADPNSRVGRLVIPEGRQLDDTTDMKTNKVNPGIFTLI
CCCCCCHHHHEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
SQATCVDLDGNRRCVPVQQLRAAATNSTTAALSVPPWALEPVNELGRDHRRIEGLIAPGT
CCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEECCCC
FNVDPSASPESILAGLISAGAEEYLKSGLVDTAQAMGLSPYDILVVASLVQQESNTPDFA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
KVAQVIYNRLHAHHTLEFDSTVNYPLDRREVATSDADRGQKTPWNTYVSQGLPATAICSP
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCC
GIDALHAAEHPAPGDWLYFVTIDAAGTTLFTKDYQQHLANIELAKHNGVLDSTPR
CCHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHCEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]