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The map label for this gene is yngJ [H]

Identifier: 41406811

GI number: 41406811

Start: 737800

End: 739011

Strand: Direct

Name: yngJ [H]

Synonym: MAP0713

Alternate gene names: 41406811

Gene position: 737800-739011 (Clockwise)

Preceding gene: 41406807

Following gene: 41406820

Centisome position: 15.28

GC content: 68.56

Gene sequence:

>1212_bases
GTGCGCGAGGCCAGTTCGGGAAGCCGGGGAAGTGCTGTGCAACTGACGTTTGACGCCGACGTGGAGGCGTTCCGGGCCGA
ATTCGTCGCCTTCCTCGATGCGCATTTGCCCGCCGAGGCCGAGGCGCTGGAGCGGCCGCGGTCCAGCTCACACGTACCGG
AGTGGGCGCGCCGCTGGCAACGACTGCTGTTCGACAGCGGCTGGTTGCTGCCCGGCAATCCGCCCGAGTTCGGCGGCCGC
AACGCGACGTTGCTGCAGCAGTACGTGTACTTCGAGGAGCTGGGGCGGCGGCGCATCTATCAGAGCTTCAATCCGCAGGG
CGTCGGGATCATCGCGGCGTCGCTGTTGAGCTTCGGCACCCCCGAACAAAAGCAGCGCTGGGCGGTGCCGATTCTGCGCG
CGGAGATGACCGCCTCGCTGGGCATGAGCGAACCGGGCGCGGGTTCGGACCTGGCGTCACTGAAAACCCGCGCCGTGCTC
GACGGCGACCGCTTCGTGGTCAACGGCCAGAAGGTGTGGACCTCCGGCGCCCACGACGCCGACGTGCTGCTGACATTTGT
GCGCACCGATCCGAATGCGCCCAAGCACAAGGGGATCAGCGTGCTGCTGATCCCGACCGACACTCCGGGCGTGGTGCGCC
GCCCGTTCGCGTCGATGTGCGATATCGACGAAATCGATTTCAACGAGGTGTTCTTCACCGACGCGCGGGTGCCGGCGGAG
AACCTGGTGGGCGAGCTCAACGAGGGCTGGCGGGTGGCCACCGGTTCGCTGGGACACGAACGCGTCATGCTGTGGATGGG
TTATGTCGATCTGCTGCACGAATTGAGCGCCGACTTCCGTCCGGCCGATGCGCTGCAGCGGGACCGCTACGCCACCCTGG
TGATGGACGCGCACGCCCTGCGGTTGCTGGGATCGGCGGCGCTGGCCGCCGCCGCCCGCGGCGAAGAGGACGTGCCCGCC
CAGTCCGTGCTCAAGCTGCTGGGTTCCGAGGCGCTGCAACGCGCGTCCGAGGACGCGCTGGAGGCGGCGGGGTCCGCCGG
GCTGGTGCGCCGGGCGGTGACCGCGCAGGTCGCGCCGCTGAATCTGGACAGCGACTACCGCAGCTGGTTCGACCGCTACG
CGCGCACCTTCGCCGCCACCATCGCCGGTGGCACGTCGGAGATCCAGCGCAATATCATCGCCGAACGCGTCCTCGGGCTG
CCGCGCAATTAA

Upstream 100 bases:

>100_bases
ACTTTCTTACGGCGAGAATACTATTCTCTTAGACGTGTGTAGGGAAGCGTAATCGCAAAGAGCGAACCGTGCCGTCGGCG
GAAAGCATGATCTACCGACG

Downstream 100 bases:

>100_bases
GCTGCGCGTCAGCGGTTTTGGGCATCCATGCGGGCGTAGTAGCTGATCGCCACCAGCCCCGCAAGGATCGCGACGGCCCC
TAACACGATCCCCGTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MREASSGSRGSAVQLTFDADVEAFRAEFVAFLDAHLPAEAEALERPRSSSHVPEWARRWQRLLFDSGWLLPGNPPEFGGR
NATLLQQYVYFEELGRRRIYQSFNPQGVGIIAASLLSFGTPEQKQRWAVPILRAEMTASLGMSEPGAGSDLASLKTRAVL
DGDRFVVNGQKVWTSGAHDADVLLTFVRTDPNAPKHKGISVLLIPTDTPGVVRRPFASMCDIDEIDFNEVFFTDARVPAE
NLVGELNEGWRVATGSLGHERVMLWMGYVDLLHELSADFRPADALQRDRYATLVMDAHALRLLGSAALAAAARGEEDVPA
QSVLKLLGSEALQRASEDALEAAGSAGLVRRAVTAQVAPLNLDSDYRSWFDRYARTFAATIAGGTSEIQRNIIAERVLGL
PRN

Sequences:

>Translated_403_residues
MREASSGSRGSAVQLTFDADVEAFRAEFVAFLDAHLPAEAEALERPRSSSHVPEWARRWQRLLFDSGWLLPGNPPEFGGR
NATLLQQYVYFEELGRRRIYQSFNPQGVGIIAASLLSFGTPEQKQRWAVPILRAEMTASLGMSEPGAGSDLASLKTRAVL
DGDRFVVNGQKVWTSGAHDADVLLTFVRTDPNAPKHKGISVLLIPTDTPGVVRRPFASMCDIDEIDFNEVFFTDARVPAE
NLVGELNEGWRVATGSLGHERVMLWMGYVDLLHELSADFRPADALQRDRYATLVMDAHALRLLGSAALAAAARGEEDVPA
QSVLKLLGSEALQRASEDALEAAGSAGLVRRAVTAQVAPLNLDSDYRSWFDRYARTFAATIAGGTSEIQRNIIAERVLGL
PRN
>Mature_403_residues
MREASSGSRGSAVQLTFDADVEAFRAEFVAFLDAHLPAEAEALERPRSSSHVPEWARRWQRLLFDSGWLLPGNPPEFGGR
NATLLQQYVYFEELGRRRIYQSFNPQGVGIIAASLLSFGTPEQKQRWAVPILRAEMTASLGMSEPGAGSDLASLKTRAVL
DGDRFVVNGQKVWTSGAHDADVLLTFVRTDPNAPKHKGISVLLIPTDTPGVVRRPFASMCDIDEIDFNEVFFTDARVPAE
NLVGELNEGWRVATGSLGHERVMLWMGYVDLLHELSADFRPADALQRDRYATLVMDAHALRLLGSAALAAAARGEEDVPA
QSVLKLLGSEALQRASEDALEAAGSAGLVRRAVTAQVAPLNLDSDYRSWFDRYARTFAATIAGGTSEIQRNIIAERVLGL
PRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=258, Percent_Identity=28.2945736434109, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI4501859, Length=358, Percent_Identity=28.2122905027933, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557233, Length=342, Percent_Identity=27.7777777777778, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI226958414, Length=208, Percent_Identity=29.3269230769231, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI7656849, Length=295, Percent_Identity=26.1016949152542, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI187960098, Length=305, Percent_Identity=25.9016393442623, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4557231, Length=305, Percent_Identity=25.9016393442623, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI211971008, Length=157, Percent_Identity=36.9426751592357, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI48976061, Length=157, Percent_Identity=36.9426751592357, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI38505218, Length=309, Percent_Identity=28.1553398058252, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI76496475, Length=351, Percent_Identity=25.6410256410256, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4557235, Length=351, Percent_Identity=25.6410256410256, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4501857, Length=157, Percent_Identity=31.8471337579618, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI21361497, Length=309, Percent_Identity=26.537216828479, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI87081958, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=393, Percent_Identity=25.6997455470738, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=357, Percent_Identity=26.0504201680672, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17570075, Length=424, Percent_Identity=25.9433962264151, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=233, Percent_Identity=29.6137339055794, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=403, Percent_Identity=24.8138957816377, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=356, Percent_Identity=24.1573033707865, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=248, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=207, Percent_Identity=27.536231884058, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=150, Percent_Identity=30, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=244, Percent_Identity=24.1803278688525, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=148, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=148, Percent_Identity=32.4324324324324, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17533517, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=199, Percent_Identity=26.1306532663317, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=200, Percent_Identity=28, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355753, Length=407, Percent_Identity=26.044226044226, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24666513, Length=364, Percent_Identity=27.7472527472527, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21356377, Length=361, Percent_Identity=27.4238227146814, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281363737, Length=202, Percent_Identity=29.2079207920792, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646207, Length=410, Percent_Identity=25.609756097561, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24660351, Length=346, Percent_Identity=26.3005780346821, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44116; Mature: 44116

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREASSGSRGSAVQLTFDADVEAFRAEFVAFLDAHLPAEAEALERPRSSSHVPEWARRWQ
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHH
RLLFDSGWLLPGNPPEFGGRNATLLQQYVYFEELGRRRIYQSFNPQGVGIIAASLLSFGT
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PEQKQRWAVPILRAEMTASLGMSEPGAGSDLASLKTRAVLDGDRFVVNGQKVWTSGAHDA
CCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCEEEECCCEEECCCCCCH
DVLLTFVRTDPNAPKHKGISVLLIPTDTPGVVRRPFASMCDIDEIDFNEVFFTDARVPAE
HHEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCHHHHCCCCCCCCCCEEEECCCCCHH
NLVGELNEGWRVATGSLGHERVMLWMGYVDLLHELSADFRPADALQRDRYATLVMDAHAL
HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHH
RLLGSAALAAAARGEEDVPAQSVLKLLGSEALQRASEDALEAAGSAGLVRRAVTAQVAPL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
NLDSDYRSWFDRYARTFAATIAGGTSEIQRNIIAERVLGLPRN
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MREASSGSRGSAVQLTFDADVEAFRAEFVAFLDAHLPAEAEALERPRSSSHVPEWARRWQ
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHH
RLLFDSGWLLPGNPPEFGGRNATLLQQYVYFEELGRRRIYQSFNPQGVGIIAASLLSFGT
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PEQKQRWAVPILRAEMTASLGMSEPGAGSDLASLKTRAVLDGDRFVVNGQKVWTSGAHDA
CCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCEEEECCCEEECCCCCCH
DVLLTFVRTDPNAPKHKGISVLLIPTDTPGVVRRPFASMCDIDEIDFNEVFFTDARVPAE
HHEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCHHHHCCCCCCCCCCEEEECCCCCHH
NLVGELNEGWRVATGSLGHERVMLWMGYVDLLHELSADFRPADALQRDRYATLVMDAHAL
HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHH
RLLGSAALAAAARGEEDVPAQSVLKLLGSEALQRASEDALEAAGSAGLVRRAVTAQVAPL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
NLDSDYRSWFDRYARTFAATIAGGTSEIQRNIIAERVLGLPRN
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]