| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406820
Identifier: 41406820
GI number: 41406820
Start: 745444
End: 746742
Strand: Direct
Name: 41406820
Synonym: MAP0722
Alternate gene names: NA
Gene position: 745444-746742 (Clockwise)
Preceding gene: 41406811
Following gene: 41406821
Centisome position: 15.43
GC content: 64.2
Gene sequence:
>1299_bases ATGAACAAAGAGGACATGATCCTGATCAGCGTCGACGACCACACCGTCGAGCCGCCCGACATGTTCAAGAACCATCTGCC GAAGAAGTATCTGGACGACGCGCCGCGGCTGGTGCACAACCCGGACGGCTCGGACGGGTGGAAGTTCCGCGACACCGTCA TCCCCAACGTGGCGCTCAATGCGGTCGCCGGCCGGCCGAAGGAGGAGTACGGCATCGAGCCGACCGGGCTCGACGAGATC CGGCCGGGTTGCTACAACGTCGACGAGCGCGTCAAGGACATGAATGCCGGCGGCATCCTGGCCTCGATCTGCTTCCCGTC GTTCCCCGGCTTCGCCGGGCGGCTGTTCGCCACCGAGGACAACGACTTCTCGATCGCGCTGGTGCAGGCCTACAACGACT GGCACATCGACGAGTGGTGTGGGGCCTACCCGGCGCGCTTCATCCCGATGGCGATCCCGGTGATCTGGGATGCCGAGGAG TGCGCCAAGGAGGTGCGCCGGGTGTCCAAGAAGGGCGTGCACGCGCTGACCTTCACCGAGAACCCGGCCGCGATGGGATA TCCCAGCTTCCACGACGAGTACTGGAACCCGCTGTGGAAAGCGTTGGTGGACACCAACACCGTGATGAACGTGCACATCG GTTCCTCGGGGCGGTTGGCCATCACCGCGCCCGATGCGCCGATGGACGTGATGATCACGCTGCAGCCGATGAACATCGTG CAGGCCGCCGCTGACCTGTTGTGGTCGCGGCCGATCAAGGAGTTCCCGGACCTCAAGATCGCGCTCTCCGAGGGCGGGAC GGGTTGGATTCCCTACTTCCTGGAGCGCGCGGACCGGACCTTCGAGATGCACTCCGCTTGGACGCACCAGGACTTCAAGG GCAAGCTGCCCAGCGAGGTTTTCCGCGAGCACTTTTTGACCTGCTTCATCAGCGACAAGGTCGGTGTGGCGCTGCGCAAC GAGATCGGGATCGACAACATCTGCTGGGAGGCCGACTACCCGCACAGCGACTCGATGTGGCCCGGCGCCCCCGAGGAGCT GTGGGATGTGTTGTCCATCAACAACGTTCCCGACGACGAGATCAACAAGATGACCTACCAGAACGCCATGCGGTGGTATT CGTTCGACCCGTTCACCCACATTTCGCGGGAACAGGCCACCGTCGGTGCGCTGCGCAAGGCCGCCGAGGGGCACGACGTG TCCATCAAGGCGCAGGGCCACGACAAGGACAGCCGGGGCGGCTCGTCGTTCGCGGAGTTCGCGGCCAACGCGAAAGCGCT CACCGGCAACAAGGACTGA
Upstream 100 bases:
>100_bases CCTGACGAGAAGATAGTTTTCATTTTAGTGATCTTGGCACGGGACAGCGATTCGCCGCGGCCGTAATCGATCCGGCGGAT CCAACGGAAGGGCAACGGCC
Downstream 100 bases:
>100_bases GCACCGTACTGTCGCCGAGCAGACGCAAAAGCCCCCGATCCATCGGCGTGTCGGGTGCTTTTGTGTCTGCTCGCGCTCGA GAAAGGGGCGTGGCATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Amidase; Amidohydrolase Family Protein; Amidohydrolase Family; Metal-Dependent Hydrolase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; TIM-Barrel Fold Metal-Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDAPRLVHNPDGSDGWKFRDTVIPNVALNAVAGRPKEEYGIEPTGLDEI RPGCYNVDERVKDMNAGGILASICFPSFPGFAGRLFATEDNDFSIALVQAYNDWHIDEWCGAYPARFIPMAIPVIWDAEE CAKEVRRVSKKGVHALTFTENPAAMGYPSFHDEYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDVMITLQPMNIV QAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRTFEMHSAWTHQDFKGKLPSEVFREHFLTCFISDKVGVALRN EIGIDNICWEADYPHSDSMWPGAPEELWDVLSINNVPDDEINKMTYQNAMRWYSFDPFTHISREQATVGALRKAAEGHDV SIKAQGHDKDSRGGSSFAEFAANAKALTGNKD
Sequences:
>Translated_432_residues MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDAPRLVHNPDGSDGWKFRDTVIPNVALNAVAGRPKEEYGIEPTGLDEI RPGCYNVDERVKDMNAGGILASICFPSFPGFAGRLFATEDNDFSIALVQAYNDWHIDEWCGAYPARFIPMAIPVIWDAEE CAKEVRRVSKKGVHALTFTENPAAMGYPSFHDEYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDVMITLQPMNIV QAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRTFEMHSAWTHQDFKGKLPSEVFREHFLTCFISDKVGVALRN EIGIDNICWEADYPHSDSMWPGAPEELWDVLSINNVPDDEINKMTYQNAMRWYSFDPFTHISREQATVGALRKAAEGHDV SIKAQGHDKDSRGGSSFAEFAANAKALTGNKD >Mature_432_residues MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDAPRLVHNPDGSDGWKFRDTVIPNVALNAVAGRPKEEYGIEPTGLDEI RPGCYNVDERVKDMNAGGILASICFPSFPGFAGRLFATEDNDFSIALVQAYNDWHIDEWCGAYPARFIPMAIPVIWDAEE CAKEVRRVSKKGVHALTFTENPAAMGYPSFHDEYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDVMITLQPMNIV QAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRTFEMHSAWTHQDFKGKLPSEVFREHFLTCFISDKVGVALRN EIGIDNICWEADYPHSDSMWPGAPEELWDVLSINNVPDDEINKMTYQNAMRWYSFDPFTHISREQATVGALRKAAEGHDV SIKAQGHDKDSRGGSSFAEFAANAKALTGNKD
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48466; Mature: 48466
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDAPRLVHNPDGSDGWKFRDTVIPNVALN CCCCCEEEEEECCCCCCCHHHHHHCCCHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHH AVAGRPKEEYGIEPTGLDEIRPGCYNVDERVKDMNAGGILASICFPSFPGFAGRLFATED HHCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCCEEHHHHHCCCCCCCCEEEEECC NDFSIALVQAYNDWHIDEWCGAYPARFIPMAIPVIWDAEECAKEVRRVSKKGVHALTFTE CCEEEEEEEECCCCCHHHHHCCCCHHHHHEEEEEEECHHHHHHHHHHHHHCCCEEEEEEC NPAAMGYPSFHDEYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDVMITLQPMNIV CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCHHHH QAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRTFEMHSAWTHQDFKGKLPSEV HHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEHHHCCCCCCCCCCCCHHH FREHFLTCFISDKVGVALRNEIGIDNICWEADYPHSDSMWPGAPEELWDVLSINNVPDDE HHHHHEEEEECCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHH INKMTYQNAMRWYSFDPFTHISREQATVGALRKAAEGHDVSIKAQGHDKDSRGGSSFAEF HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHH AANAKALTGNKD HCCCCCCCCCCC >Mature Secondary Structure MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDAPRLVHNPDGSDGWKFRDTVIPNVALN CCCCCEEEEEECCCCCCCHHHHHHCCCHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHH AVAGRPKEEYGIEPTGLDEIRPGCYNVDERVKDMNAGGILASICFPSFPGFAGRLFATED HHCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCCEEHHHHHCCCCCCCCEEEEECC NDFSIALVQAYNDWHIDEWCGAYPARFIPMAIPVIWDAEECAKEVRRVSKKGVHALTFTE CCEEEEEEEECCCCCHHHHHCCCCHHHHHEEEEEEECHHHHHHHHHHHHHCCCEEEEEEC NPAAMGYPSFHDEYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDVMITLQPMNIV CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCHHHH QAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRTFEMHSAWTHQDFKGKLPSEV HHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEHHHCCCCCCCCCCCCHHH FREHFLTCFISDKVGVALRNEIGIDNICWEADYPHSDSMWPGAPEELWDVLSINNVPDDE HHHHHEEEEECCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHH INKMTYQNAMRWYSFDPFTHISREQATVGALRKAAEGHDVSIKAQGHDKDSRGGSSFAEF HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHH AANAKALTGNKD HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA