| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is frc [H]
Identifier: 41406806
GI number: 41406806
Start: 731689
End: 734136
Strand: Direct
Name: frc [H]
Synonym: MAP0708
Alternate gene names: 41406806
Gene position: 731689-734136 (Clockwise)
Preceding gene: 41406805
Following gene: 41406807
Centisome position: 15.15
GC content: 70.14
Gene sequence:
>2448_bases ATGCCCCGCCCCGGCGAAGCGAACGAAGTAGTGACGCAACCCCCGCTGGCCGGCTATACGGTGATCGATCTGTCCACCGG CATCGCCGGAGCCTACTGCACCAAGCTCCTGGCCGACGGCGGCGCCGTGGTGGTCAAAGTCGAACCGCCGCAAGGCGATC CGCTGCGCACCTGGTCGGCCTCCGGTGCCCCCGTCCCGGCCGGTGGTGACGGCGCCCTGTTCAGCTTCCTGGCCGGCGCC AAACACAGCGTCGTCGCCGACCCCGCCAACGAGGACGACACCGCGCTGGTGCACCGGTTACTGGCCGCGGCGGACGCGGT GGTCTGGTCGGGCGGGTCCACGGTGGCCGAGCACCACGACTTCACGCCGCGTGCGATCCAGGCCCGCCACCCCCATCTCA CCGTCACCTCGATCACCCCGTTCGGGCTGGAAGGCCCCTGGCGGGACCGGGCGGCCACCGAGTTCACCCTGCAGGCCTGG TCGGGAGGAATCATCGGCCTCGGGCGCGGCGAGCAGCACCGCCCGCCCGTCTTCGTCGGCGGTCAGGTCGGCGAATATCT GGCCGGGGCCTATGCCAGCGCGGCCACCCTGGCGTCGCGCTGGCGCCGAATCCACGGCGGGCCAGGAGAATTGCTGGACC TGTCCATGCTGGAGACACAGATCCTGTGCCTCACCTACTACCCGGTCACCTACTTCGAGGTGCTCGGCCGGCCCTGGCGT GACACCCGGCGGCCGACCGTGCCGGGCGTGGCGCAGGCCAAGGACGGCCTGGTGGACGTCGGCTGCGGCACCGCCCAGCA GTGGTTCGACCTGTGCGCCATGGTGGGTCACCCGGAGTGGATCGACGAGGACTCGCCGCTGTCGATCACCGAGCTGGCCA ACATCTACGCCGACGAGATCTTCGCGTGGATGGCCCGCACTCCCGTCGAAGAAATCCGGGAACTGGCAACGGCCTTCCGC ATCCCGTACGCCCCGGTGGCCAACGGGGCGAATGTCACGTCGTTCGATCAGTTCCGTGAGCGCGGGTCCTTCGTGCGCAA TCCGCGCGACGGCTTCCTGCAGCCGGGACACCCCTACCGGATGCACCCGGCGCAGCTGCGCGCGCCGCATCCTGCGCCGC GCCTCGGTGAGCACACCGAGGGCTACCGCGGCGCGGAACTGACGCCACGGCCCGCACCCGACGGAGGTCGAGCAGCGTTG CCGTTCAACGGACTTCGGGTGCTGGACCTCACCACATTCTGGGCGGGCCCCTGCTGCACCCACTTTATGGCCATGCTCGG CGCCGAGGTCATCCACGTGGAGTCCACCCGCCGTCCCGACGGCACCCGGCTGATCGCCGGGGTGCCCGTCAGCGAGGACC GGTGGTGGGAGAAGTCCCCCATCTTCGAGGCCCTGAACACCAACAAGAAGGGCCTGACCCTGGACCTGCAGAGCCCACGC GGCCGGGACGTGTTGCGGCGGCTCATCGCCACCTGCGACGTGATCGTGGAGAACTTCACCCCGCGGGTGCTGGATGCGAT CGGACTGGATTTCGCCACCGTGCAATCGATTCGCGCCGACGCGGTCATGGTGCGGATGCCCGGCTTCGGGCTCACCGGGC CGTGGCGGGACAACCCGGCATTCGCCTACGTCATCGAATCCGCGTCCGGGTTGAGTTGGCTCACCGGCTACCCGGATCGC ACCCCCTATGACCCGTACTCGATCGGCGACCCGTGCGCGGGGGTGCACGCCCTCAACGCGATACTGCTGGCGCTCGAGCA CCGGCGCCGCACCGGCGAGGGGGTGTTCGTCGAGGCGGCGATGGTCGATGCCGCGCTGAGCATCGCCGCCGAGCAGGTCA TCGAGTACTCGGCCTACGGCGCGCTGCTCGAGCGGGCCGGCAACCGGGGGCCCACCGCCGCCCCGCAGAACCTCTACCTC AGCGCCGACGTCGACGAATTCGGCCGGCTCGACAGCTGGGTCGCCATCGCCGTGGCCACCGACGACCAGTGGCAGCGATT GTGCCGCGCACTCGGATCCCCCTCGTGGGCAATGGATCCCGAGCTGTCGGCCGCTTCCGGCCGGCGTACGCATCAGGATT TCATCGACAAGCAGCTCGCGGCGTGGTGCGAGTGCCGCGGCCGCGACGACATCGTCGCCACCCTCTGGGACGCCGGGGTG CCGGTGGCCAAGGTCATGCAACCCCACCGGCAATCCGAGCTGGAACAGCTGACGTTCCGGGGCTTTTTCGAAGAGGTCGA CCACCCGGTCAACGGCCCGGCTAGGCTCAGCACCGTGCCGATGAGATCCTCCGCCGGCCCCGATCGGTTCCACACCGCGC CCGCGCCGCTGCTCGGGCAGCACAACCAGGAACTGCTGTCCGGGCTGGGCTTGTCCGACGCGGACATCGCGACGCTGCGG GCCGAAGGTGTCATCGGCAGCGCGCCGGCCATACACCCGGCGGGCTGA
Upstream 100 bases:
>100_bases GGGAGGAAGGAGTCGGCGCGGTGTTCGGCCGGGAAGCGGTCCTGATCACCGCCGACGGACCCGAAGTGCTCACCGCGAGC CCGTTCTGGCAGCCCTGACC
Downstream 100 bases:
>100_bases CCGGCGATGGCCATCGATCCCTCGGACATCCTGCTCACCGACCGGGTCGCGGTGGTGACCGGGGCGGGGGCGGGCATCGG CCGCGGCATCGCCGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Formyl-CoA transferase [H]
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGA KHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAW SGGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFR IPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAAL PFNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDR TPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYL SADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLR AEGVIGSAPAIHPAG
Sequences:
>Translated_815_residues MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGA KHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAW SGGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFR IPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAAL PFNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDR TPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYL SADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLR AEGVIGSAPAIHPAG >Mature_814_residues PRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGAK HSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWS GGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWRD TRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFRI PYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALP FNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPRG RDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDRT PYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLS ADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGVP VAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLRA EGVIGSAPAIHPAG
Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]
Homologues:
Organism=Homo sapiens, GI300863128, Length=423, Percent_Identity=26.241134751773, Blast_Score=146, Evalue=1e-34, Organism=Homo sapiens, GI300863124, Length=449, Percent_Identity=25.6124721603563, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI300863126, Length=422, Percent_Identity=24.1706161137441, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI266456254, Length=422, Percent_Identity=26.5402843601896, Blast_Score=95, Evalue=3e-19, Organism=Homo sapiens, GI42794625, Length=419, Percent_Identity=26.491646778043, Blast_Score=93, Evalue=9e-19, Organism=Homo sapiens, GI13376042, Length=328, Percent_Identity=26.219512195122, Blast_Score=91, Evalue=6e-18, Organism=Homo sapiens, GI266458393, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=9e-14, Organism=Homo sapiens, GI266458397, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=1e-13, Organism=Escherichia coli, GI87082093, Length=386, Percent_Identity=29.2746113989637, Blast_Score=167, Evalue=3e-42, Organism=Escherichia coli, GI1788717, Length=426, Percent_Identity=28.8732394366197, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1786222, Length=434, Percent_Identity=22.3502304147465, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648431, Length=407, Percent_Identity=28.2555282555283, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24585488, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003673 - InterPro: IPR017659 [H]
Pfam domain/function: PF02515 CoA_transf_3 [H]
EC number: =2.8.3.16 [H]
Molecular weight: Translated: 88098; Mature: 87967
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSA CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECC SGAPVPAGGDGALFSFLAGAKHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHD CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHCCC FTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWSGGIIGLGRGEQHRPPVFVG CCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEC GQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHEEEEEEECHHHHHHHHCCCCC DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEI CCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH FAWMARTPVEEIRELATAFRIPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYR HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCC MHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALPFNGLRVLDLTTFWAGPCCT CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHCCCHHHH HFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR HHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCC GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPA CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCE FAYVIESASGLSWLTGYPDRTPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAA EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH MVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLSADVDEFGRLDSWVAIAVAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEC DDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCC PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQ CHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCC HNQELLSGLGLSDADIATLRAEGVIGSAPAIHPAG CCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure PRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSA CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECC SGAPVPAGGDGALFSFLAGAKHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHD CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHCCC FTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWSGGIIGLGRGEQHRPPVFVG CCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEC GQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHEEEEEEECHHHHHHHHCCCCC DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEI CCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH FAWMARTPVEEIRELATAFRIPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYR HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCC MHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALPFNGLRVLDLTTFWAGPCCT CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHCCCHHHH HFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR HHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCC GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPA CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCE FAYVIESASGLSWLTGYPDRTPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAA EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH MVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLSADVDEFGRLDSWVAIAVAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEC DDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCC PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQ CHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCC HNQELLSGLGLSDADIATLRAEGVIGSAPAIHPAG CCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA