Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is frc [H]

Identifier: 41406806

GI number: 41406806

Start: 731689

End: 734136

Strand: Direct

Name: frc [H]

Synonym: MAP0708

Alternate gene names: 41406806

Gene position: 731689-734136 (Clockwise)

Preceding gene: 41406805

Following gene: 41406807

Centisome position: 15.15

GC content: 70.14

Gene sequence:

>2448_bases
ATGCCCCGCCCCGGCGAAGCGAACGAAGTAGTGACGCAACCCCCGCTGGCCGGCTATACGGTGATCGATCTGTCCACCGG
CATCGCCGGAGCCTACTGCACCAAGCTCCTGGCCGACGGCGGCGCCGTGGTGGTCAAAGTCGAACCGCCGCAAGGCGATC
CGCTGCGCACCTGGTCGGCCTCCGGTGCCCCCGTCCCGGCCGGTGGTGACGGCGCCCTGTTCAGCTTCCTGGCCGGCGCC
AAACACAGCGTCGTCGCCGACCCCGCCAACGAGGACGACACCGCGCTGGTGCACCGGTTACTGGCCGCGGCGGACGCGGT
GGTCTGGTCGGGCGGGTCCACGGTGGCCGAGCACCACGACTTCACGCCGCGTGCGATCCAGGCCCGCCACCCCCATCTCA
CCGTCACCTCGATCACCCCGTTCGGGCTGGAAGGCCCCTGGCGGGACCGGGCGGCCACCGAGTTCACCCTGCAGGCCTGG
TCGGGAGGAATCATCGGCCTCGGGCGCGGCGAGCAGCACCGCCCGCCCGTCTTCGTCGGCGGTCAGGTCGGCGAATATCT
GGCCGGGGCCTATGCCAGCGCGGCCACCCTGGCGTCGCGCTGGCGCCGAATCCACGGCGGGCCAGGAGAATTGCTGGACC
TGTCCATGCTGGAGACACAGATCCTGTGCCTCACCTACTACCCGGTCACCTACTTCGAGGTGCTCGGCCGGCCCTGGCGT
GACACCCGGCGGCCGACCGTGCCGGGCGTGGCGCAGGCCAAGGACGGCCTGGTGGACGTCGGCTGCGGCACCGCCCAGCA
GTGGTTCGACCTGTGCGCCATGGTGGGTCACCCGGAGTGGATCGACGAGGACTCGCCGCTGTCGATCACCGAGCTGGCCA
ACATCTACGCCGACGAGATCTTCGCGTGGATGGCCCGCACTCCCGTCGAAGAAATCCGGGAACTGGCAACGGCCTTCCGC
ATCCCGTACGCCCCGGTGGCCAACGGGGCGAATGTCACGTCGTTCGATCAGTTCCGTGAGCGCGGGTCCTTCGTGCGCAA
TCCGCGCGACGGCTTCCTGCAGCCGGGACACCCCTACCGGATGCACCCGGCGCAGCTGCGCGCGCCGCATCCTGCGCCGC
GCCTCGGTGAGCACACCGAGGGCTACCGCGGCGCGGAACTGACGCCACGGCCCGCACCCGACGGAGGTCGAGCAGCGTTG
CCGTTCAACGGACTTCGGGTGCTGGACCTCACCACATTCTGGGCGGGCCCCTGCTGCACCCACTTTATGGCCATGCTCGG
CGCCGAGGTCATCCACGTGGAGTCCACCCGCCGTCCCGACGGCACCCGGCTGATCGCCGGGGTGCCCGTCAGCGAGGACC
GGTGGTGGGAGAAGTCCCCCATCTTCGAGGCCCTGAACACCAACAAGAAGGGCCTGACCCTGGACCTGCAGAGCCCACGC
GGCCGGGACGTGTTGCGGCGGCTCATCGCCACCTGCGACGTGATCGTGGAGAACTTCACCCCGCGGGTGCTGGATGCGAT
CGGACTGGATTTCGCCACCGTGCAATCGATTCGCGCCGACGCGGTCATGGTGCGGATGCCCGGCTTCGGGCTCACCGGGC
CGTGGCGGGACAACCCGGCATTCGCCTACGTCATCGAATCCGCGTCCGGGTTGAGTTGGCTCACCGGCTACCCGGATCGC
ACCCCCTATGACCCGTACTCGATCGGCGACCCGTGCGCGGGGGTGCACGCCCTCAACGCGATACTGCTGGCGCTCGAGCA
CCGGCGCCGCACCGGCGAGGGGGTGTTCGTCGAGGCGGCGATGGTCGATGCCGCGCTGAGCATCGCCGCCGAGCAGGTCA
TCGAGTACTCGGCCTACGGCGCGCTGCTCGAGCGGGCCGGCAACCGGGGGCCCACCGCCGCCCCGCAGAACCTCTACCTC
AGCGCCGACGTCGACGAATTCGGCCGGCTCGACAGCTGGGTCGCCATCGCCGTGGCCACCGACGACCAGTGGCAGCGATT
GTGCCGCGCACTCGGATCCCCCTCGTGGGCAATGGATCCCGAGCTGTCGGCCGCTTCCGGCCGGCGTACGCATCAGGATT
TCATCGACAAGCAGCTCGCGGCGTGGTGCGAGTGCCGCGGCCGCGACGACATCGTCGCCACCCTCTGGGACGCCGGGGTG
CCGGTGGCCAAGGTCATGCAACCCCACCGGCAATCCGAGCTGGAACAGCTGACGTTCCGGGGCTTTTTCGAAGAGGTCGA
CCACCCGGTCAACGGCCCGGCTAGGCTCAGCACCGTGCCGATGAGATCCTCCGCCGGCCCCGATCGGTTCCACACCGCGC
CCGCGCCGCTGCTCGGGCAGCACAACCAGGAACTGCTGTCCGGGCTGGGCTTGTCCGACGCGGACATCGCGACGCTGCGG
GCCGAAGGTGTCATCGGCAGCGCGCCGGCCATACACCCGGCGGGCTGA

Upstream 100 bases:

>100_bases
GGGAGGAAGGAGTCGGCGCGGTGTTCGGCCGGGAAGCGGTCCTGATCACCGCCGACGGACCCGAAGTGCTCACCGCGAGC
CCGTTCTGGCAGCCCTGACC

Downstream 100 bases:

>100_bases
CCGGCGATGGCCATCGATCCCTCGGACATCCTGCTCACCGACCGGGTCGCGGTGGTGACCGGGGCGGGGGCGGGCATCGG
CCGCGGCATCGCCGCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 815; Mature: 814

Protein sequence:

>815_residues
MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGA
KHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAW
SGGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR
DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFR
IPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAAL
PFNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR
GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDR
TPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYL
SADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV
PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLR
AEGVIGSAPAIHPAG

Sequences:

>Translated_815_residues
MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGA
KHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAW
SGGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR
DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFR
IPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAAL
PFNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR
GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDR
TPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYL
SADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV
PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLR
AEGVIGSAPAIHPAG
>Mature_814_residues
PRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSASGAPVPAGGDGALFSFLAGAK
HSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHDFTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWS
GGIIGLGRGEQHRPPVFVGGQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWRD
TRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEIFAWMARTPVEEIRELATAFRI
PYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYRMHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALP
FNGLRVLDLTTFWAGPCCTHFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPRG
RDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPAFAYVIESASGLSWLTGYPDRT
PYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAAMVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLS
ADVDEFGRLDSWVAIAVATDDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGVP
VAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQHNQELLSGLGLSDADIATLRA
EGVIGSAPAIHPAG

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=423, Percent_Identity=26.241134751773, Blast_Score=146, Evalue=1e-34,
Organism=Homo sapiens, GI300863124, Length=449, Percent_Identity=25.6124721603563, Blast_Score=135, Evalue=2e-31,
Organism=Homo sapiens, GI300863126, Length=422, Percent_Identity=24.1706161137441, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI266456254, Length=422, Percent_Identity=26.5402843601896, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI42794625, Length=419, Percent_Identity=26.491646778043, Blast_Score=93, Evalue=9e-19,
Organism=Homo sapiens, GI13376042, Length=328, Percent_Identity=26.219512195122, Blast_Score=91, Evalue=6e-18,
Organism=Homo sapiens, GI266458393, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=9e-14,
Organism=Homo sapiens, GI266458397, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=1e-13,
Organism=Escherichia coli, GI87082093, Length=386, Percent_Identity=29.2746113989637, Blast_Score=167, Evalue=3e-42,
Organism=Escherichia coli, GI1788717, Length=426, Percent_Identity=28.8732394366197, Blast_Score=158, Evalue=1e-39,
Organism=Escherichia coli, GI1786222, Length=434, Percent_Identity=22.3502304147465, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648431, Length=407, Percent_Identity=28.2555282555283, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24585488, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 88098; Mature: 87967

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSA
CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECC
SGAPVPAGGDGALFSFLAGAKHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHD
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHCCC
FTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWSGGIIGLGRGEQHRPPVFVG
CCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEC
GQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHEEEEEEECHHHHHHHHCCCCC
DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEI
CCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
FAWMARTPVEEIRELATAFRIPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYR
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCC
MHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALPFNGLRVLDLTTFWAGPCCT
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHCCCHHHH
HFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR
HHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCC
GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPA
CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCE
FAYVIESASGLSWLTGYPDRTPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH
MVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLSADVDEFGRLDSWVAIAVAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEC
DDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCC
PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQ
CHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCC
HNQELLSGLGLSDADIATLRAEGVIGSAPAIHPAG
CCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PRPGEANEVVTQPPLAGYTVIDLSTGIAGAYCTKLLADGGAVVVKVEPPQGDPLRTWSA
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECC
SGAPVPAGGDGALFSFLAGAKHSVVADPANEDDTALVHRLLAAADAVVWSGGSTVAEHHD
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHCCC
FTPRAIQARHPHLTVTSITPFGLEGPWRDRAATEFTLQAWSGGIIGLGRGEQHRPPVFVG
CCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEC
GQVGEYLAGAYASAATLASRWRRIHGGPGELLDLSMLETQILCLTYYPVTYFEVLGRPWR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHEEEEEEECHHHHHHHHCCCCC
DTRRPTVPGVAQAKDGLVDVGCGTAQQWFDLCAMVGHPEWIDEDSPLSITELANIYADEI
CCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
FAWMARTPVEEIRELATAFRIPYAPVANGANVTSFDQFRERGSFVRNPRDGFLQPGHPYR
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCC
MHPAQLRAPHPAPRLGEHTEGYRGAELTPRPAPDGGRAALPFNGLRVLDLTTFWAGPCCT
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHCCCHHHH
HFMAMLGAEVIHVESTRRPDGTRLIAGVPVSEDRWWEKSPIFEALNTNKKGLTLDLQSPR
HHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCC
GRDVLRRLIATCDVIVENFTPRVLDAIGLDFATVQSIRADAVMVRMPGFGLTGPWRDNPA
CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCE
FAYVIESASGLSWLTGYPDRTPYDPYSIGDPCAGVHALNAILLALEHRRRTGEGVFVEAA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH
MVDAALSIAAEQVIEYSAYGALLERAGNRGPTAAPQNLYLSADVDEFGRLDSWVAIAVAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEC
DDQWQRLCRALGSPSWAMDPELSAASGRRTHQDFIDKQLAAWCECRGRDDIVATLWDAGV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCC
PVAKVMQPHRQSELEQLTFRGFFEEVDHPVNGPARLSTVPMRSSAGPDRFHTAPAPLLGQ
CHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCC
HNQELLSGLGLSDADIATLRAEGVIGSAPAIHPAG
CCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA