| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406803
Identifier: 41406803
GI number: 41406803
Start: 728144
End: 729316
Strand: Direct
Name: 41406803
Synonym: MAP0705
Alternate gene names: NA
Gene position: 728144-729316 (Clockwise)
Preceding gene: 41406802
Following gene: 41406804
Centisome position: 15.08
GC content: 63.68
Gene sequence:
>1173_bases ATGACGACTCAAACAAGCCCCGTTTCCCTGTACCCGCCCGGAGGATACGGCGCCCCCAAGAATCGGCGCGGTCACGCCGT AGGCAGCGATGTCGGCCTGCCGGAGGGCACGGTGGTCTTCTCGGCGGACAACCACATCTCGCTGGCCGATGACATCTTCT ACCAACGCTTTCCGGACGACCTGAAGGACAAGGCGCCGCGGATCTGGTACGAGGACGGCGCCTACCAGGTCGGGCGCAAG GGACAGTCTTTCCTGCCCGGCGACTTCAGCGCCGTGCTGATGCAGTACGACGACCTCCCCGGTGCGGCGAGCACCAACAT CGAGGCGCGGATTCAGGAGTTGCACGAGGACGGGGTGGAAAAGGAACTGGCCTTCCCCAACGCGGTGCTGGCGCTGTTCC ACTACCCCGACAAGACACTTCGCGAGCTCGCCTTCCGCATCTACAACGAATACATCGCCGAGCTGCAGGAGCGCTCGAAC GGGCACTTCTACGGCGCCGGGCTGATCAACTGGTGGGACCCGCAGGGCACCAGAAAGACCCTGGACGAGCTGAAAGCATT GGGGCTCAAGACTTTCCTGATGCCGCTCAATCCCGGCAAGGACGACGACGGCAACATGATCGACTACTCTAGCACCGCCA TGAGACCGGTCTGGGACGAGATCGAGGCCGCGGGCCTGCCCGTCACGCACCACATCGGGGAAACGCCGCCGAAGAGCCCG ACCGAGTTCAACAGCGTCGTCGTCGGGATGATGATCAACATCGACGGATTCCGGGAGACGTTCTCCAAATACATCTTCGG CGGCATCCTCGACGATCACCCCGGGCTGCGGATCGGCTGGTTCGAGGGCGGCATCTCCTGGGTGCCGTGGGCGCTGCAGG ACGCCGAGCACCTGGTCGCGTCCTACCAGCACATGTTCAACCGGCCGCTGCAGCACGACGTGCGCTACTACTGGGACACC CACATGAGCGCCTCGTTCATGGTCGACCCGCTCGGCCTGCGGCTGATCGACCAGATCGGGGTGGACAAGGTGATGTGGTC CAGCGACTACCCGCACAACGAGAGCACCTACGGCTATTCCGAGAAGTCGCTGAAGGCCGTCGTCGACGCCGTCGGGCCGG CGAACGCGGCGCAGATCGTCAGCGGCAATGTGACGAAATTCCTGGGTTTGTAG
Upstream 100 bases:
>100_bases GAGGTCCCGTTCAAGGACGACCGCCTCGCCTACGGCGTCTACGAACTCCCGGTGACCTGGTAGCCCACGAAAGATTGCGG ATCCGAATGGAGGGTCAATG
Downstream 100 bases:
>100_bases TGACGACACTCGCGCATCTGGACACCAAAACCGGTGAAGGGCTGGTGATTCCGGAGACACCGGACTTGACCCGGCTGCGC CGCGACACCGGAACCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTTQTSPVSLYPPGGYGAPKNRRGHAVGSDVGLPEGTVVFSADNHISLADDIFYQRFPDDLKDKAPRIWYEDGAYQVGRK GQSFLPGDFSAVLMQYDDLPGAASTNIEARIQELHEDGVEKELAFPNAVLALFHYPDKTLRELAFRIYNEYIAELQERSN GHFYGAGLINWWDPQGTRKTLDELKALGLKTFLMPLNPGKDDDGNMIDYSSTAMRPVWDEIEAAGLPVTHHIGETPPKSP TEFNSVVVGMMINIDGFRETFSKYIFGGILDDHPGLRIGWFEGGISWVPWALQDAEHLVASYQHMFNRPLQHDVRYYWDT HMSASFMVDPLGLRLIDQIGVDKVMWSSDYPHNESTYGYSEKSLKAVVDAVGPANAAQIVSGNVTKFLGL
Sequences:
>Translated_390_residues MTTQTSPVSLYPPGGYGAPKNRRGHAVGSDVGLPEGTVVFSADNHISLADDIFYQRFPDDLKDKAPRIWYEDGAYQVGRK GQSFLPGDFSAVLMQYDDLPGAASTNIEARIQELHEDGVEKELAFPNAVLALFHYPDKTLRELAFRIYNEYIAELQERSN GHFYGAGLINWWDPQGTRKTLDELKALGLKTFLMPLNPGKDDDGNMIDYSSTAMRPVWDEIEAAGLPVTHHIGETPPKSP TEFNSVVVGMMINIDGFRETFSKYIFGGILDDHPGLRIGWFEGGISWVPWALQDAEHLVASYQHMFNRPLQHDVRYYWDT HMSASFMVDPLGLRLIDQIGVDKVMWSSDYPHNESTYGYSEKSLKAVVDAVGPANAAQIVSGNVTKFLGL >Mature_389_residues TTQTSPVSLYPPGGYGAPKNRRGHAVGSDVGLPEGTVVFSADNHISLADDIFYQRFPDDLKDKAPRIWYEDGAYQVGRKG QSFLPGDFSAVLMQYDDLPGAASTNIEARIQELHEDGVEKELAFPNAVLALFHYPDKTLRELAFRIYNEYIAELQERSNG HFYGAGLINWWDPQGTRKTLDELKALGLKTFLMPLNPGKDDDGNMIDYSSTAMRPVWDEIEAAGLPVTHHIGETPPKSPT EFNSVVVGMMINIDGFRETFSKYIFGGILDDHPGLRIGWFEGGISWVPWALQDAEHLVASYQHMFNRPLQHDVRYYWDTH MSASFMVDPLGLRLIDQIGVDKVMWSSDYPHNESTYGYSEKSLKAVVDAVGPANAAQIVSGNVTKFLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43540; Mature: 43409
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTSPVSLYPPGGYGAPKNRRGHAVGSDVGLPEGTVVFSADNHISLADDIFYQRFPDD CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHH LKDKAPRIWYEDGAYQVGRKGQSFLPGDFSAVLMQYDDLPGAASTNIEARIQELHEDGVE HHHCCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH KELAFPNAVLALFHYPDKTLRELAFRIYNEYIAELQERSNGHFYGAGLINWWDPQGTRKT HHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHH LDELKALGLKTFLMPLNPGKDDDGNMIDYSSTAMRPVWDEIEAAGLPVTHHIGETPPKSP HHHHHHHCHHHEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC TEFNSVVVGMMINIDGFRETFSKYIFGGILDDHPGLRIGWFEGGISWVPWALQDAEHLVA CHHHHEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH SYQHMFNRPLQHDVRYYWDTHMSASFMVDPLGLRLIDQIGVDKVMWSSDYPHNESTYGYS HHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC EKSLKAVVDAVGPANAAQIVSGNVTKFLGL HHHHHHHHHHCCCCCCHHHHCCCHHHHHCC >Mature Secondary Structure TTQTSPVSLYPPGGYGAPKNRRGHAVGSDVGLPEGTVVFSADNHISLADDIFYQRFPDD CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHH LKDKAPRIWYEDGAYQVGRKGQSFLPGDFSAVLMQYDDLPGAASTNIEARIQELHEDGVE HHHCCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH KELAFPNAVLALFHYPDKTLRELAFRIYNEYIAELQERSNGHFYGAGLINWWDPQGTRKT HHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHH LDELKALGLKTFLMPLNPGKDDDGNMIDYSSTAMRPVWDEIEAAGLPVTHHIGETPPKSP HHHHHHHCHHHEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC TEFNSVVVGMMINIDGFRETFSKYIFGGILDDHPGLRIGWFEGGISWVPWALQDAEHLVA CHHHHEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH SYQHMFNRPLQHDVRYYWDTHMSASFMVDPLGLRLIDQIGVDKVMWSSDYPHNESTYGYS HHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC EKSLKAVVDAVGPANAAQIVSGNVTKFLGL HHHHHHHHHHCCCCCCHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA