Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is ydiO [C]

Identifier: 41406779

GI number: 41406779

Start: 701876

End: 702781

Strand: Direct

Name: ydiO [C]

Synonym: MAP0681

Alternate gene names: 41406779

Gene position: 701876-702781 (Clockwise)

Preceding gene: 41406778

Following gene: 41406780

Centisome position: 14.53

GC content: 70.53

Gene sequence:

>906_bases
ATGGATGTACGTCTGACAGCTGAACAACAGCAATTGCGTGATGCCGCCGCCAAGCTGGCCGACGACCTCGGCCCGGCAAC
GGTGCAGGATCTCGACGACCAGGGCCGAATCAGCCGGCTGGACAAGCAGATCGAGATGTCCGGCTGGCGGTCGTTGCGCT
CCGACGGCGCCTCGGGTGTCGAAGTGGCCATCGTCGCCGAGGAATTCGGCCGCCGGCTGGTCGACACGCCGTTTCTGGGT
CCGGTGCTCGCCGACGACCTGCTCCGCCACGTCGGCGCCGACGCGGCGGCGACGACGGTGGCCGTCGACGATCGGGCGGT
CGATGCCCGGGGCGCTCGGCGCGCCGTCTCCCTGTCGGGTGGCGCGGTCCTGGCCGCCGATGTGCGGCCCGCGCCGGACA
ACGTCGACCTGACCCGGGCCGACGCGACGACGGTGGGCTCTCCGGAGACGCTGGGGGAGGTGGGTTCCGACGTGGCCGGG
CAGTGGCGGGCGCTGGCGCTGGTCACCACGACGGCCGACCTGGTCGGCGTCGCCCGGGGCGCGCACGCGCTGGCCTGCGA
CTACGCGAAAATCCGTGAGCAGTACGGTAATCCGATCGGGTCGTATCAAGCCATCGCGCACCTGCTGGCGGAAAGCCTTG
CGCTGATCGAGGGTTCGATCAGCGTGGCCCGGCACGCCGGGTGGGCGGTGGACGCGCTGGCACCCGCCGAGGCCATCCGG
GCGGCCCAGATCGCCAAGGTCTACTGTGCGCGTGCCGCCCGAACGGTCTGTGAGACGGCGATTCAGGTGCACGGCGGTAT
CGGCAACACCTGGGAGTGCGCGGCGCACGTCTACCTGCGCCGGGCCCTGACCTCGACCGAGCTGTGGCCGGTCGCGTTGA
AGGAGATCGATCTTGGACTTTCGTGA

Upstream 100 bases:

>100_bases
AAGCTGGCGTCCTACAAACATCTGAGCCGAGTGGTGGTCGTGCCCGAAATCCCCCGCCTGCCTTCGGGCAAGGTGCTGCG
CCGAGTGCTGAAGGAGCGCC

Downstream 100 bases:

>100_bases
TTCACCCGACGAGGCCGCCTTCCGGGAGCGGCTGCGCTCTTGGCTTTCGTTGCACGCCAAGGAGTTTGCCAGTTCCGGTG
ACGACTACTGGGCCCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase FadE; Pimeloyl-CoA Dehydrogenase Small Subunit; Acyl-CoA Dehydrogenase C-Terminal Domain Protein; Acyl-CoA Dehydrogenase Protein; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase-Like Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MDVRLTAEQQQLRDAAAKLADDLGPATVQDLDDQGRISRLDKQIEMSGWRSLRSDGASGVEVAIVAEEFGRRLVDTPFLG
PVLADDLLRHVGADAAATTVAVDDRAVDARGARRAVSLSGGAVLAADVRPAPDNVDLTRADATTVGSPETLGEVGSDVAG
QWRALALVTTTADLVGVARGAHALACDYAKIREQYGNPIGSYQAIAHLLAESLALIEGSISVARHAGWAVDALAPAEAIR
AAQIAKVYCARAARTVCETAIQVHGGIGNTWECAAHVYLRRALTSTELWPVALKEIDLGLS

Sequences:

>Translated_301_residues
MDVRLTAEQQQLRDAAAKLADDLGPATVQDLDDQGRISRLDKQIEMSGWRSLRSDGASGVEVAIVAEEFGRRLVDTPFLG
PVLADDLLRHVGADAAATTVAVDDRAVDARGARRAVSLSGGAVLAADVRPAPDNVDLTRADATTVGSPETLGEVGSDVAG
QWRALALVTTTADLVGVARGAHALACDYAKIREQYGNPIGSYQAIAHLLAESLALIEGSISVARHAGWAVDALAPAEAIR
AAQIAKVYCARAARTVCETAIQVHGGIGNTWECAAHVYLRRALTSTELWPVALKEIDLGLS
>Mature_301_residues
MDVRLTAEQQQLRDAAAKLADDLGPATVQDLDDQGRISRLDKQIEMSGWRSLRSDGASGVEVAIVAEEFGRRLVDTPFLG
PVLADDLLRHVGADAAATTVAVDDRAVDARGARRAVSLSGGAVLAADVRPAPDNVDLTRADATTVGSPETLGEVGSDVAG
QWRALALVTTTADLVGVARGAHALACDYAKIREQYGNPIGSYQAIAHLLAESLALIEGSISVARHAGWAVDALAPAEAIR
AAQIAKVYCARAARTVCETAIQVHGGIGNTWECAAHVYLRRALTSTELWPVALKEIDLGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31573; Mature: 31573

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRLTAEQQQLRDAAAKLADDLGPATVQDLDDQGRISRLDKQIEMSGWRSLRSDGASGV
CCCEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
EVAIVAEEFGRRLVDTPFLGPVLADDLLRHVGADAAATTVAVDDRAVDARGARRAVSLSG
EEEEEHHHHCHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEEEECC
GAVLAADVRPAPDNVDLTRADATTVGSPETLGEVGSDVAGQWRALALVTTTADLVGVARG
CEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHCCHHCCCCEEEEEEHHHHHHHHHHCC
AHALACDYAKIREQYGNPIGSYQAIAHLLAESLALIEGSISVARHAGWAVDALAPAEAIR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCHHHHHH
AAQIAKVYCARAARTVCETAIQVHGGIGNTWECAAHVYLRRALTSTELWPVALKEIDLGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
S
C
>Mature Secondary Structure
MDVRLTAEQQQLRDAAAKLADDLGPATVQDLDDQGRISRLDKQIEMSGWRSLRSDGASGV
CCCEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
EVAIVAEEFGRRLVDTPFLGPVLADDLLRHVGADAAATTVAVDDRAVDARGARRAVSLSG
EEEEEHHHHCHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEEEECC
GAVLAADVRPAPDNVDLTRADATTVGSPETLGEVGSDVAGQWRALALVTTTADLVGVARG
CEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHCCHHCCCCEEEEEEHHHHHHHHHHCC
AHALACDYAKIREQYGNPIGSYQAIAHLLAESLALIEGSISVARHAGWAVDALAPAEAIR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCHHHHHH
AAQIAKVYCARAARTVCETAIQVHGGIGNTWECAAHVYLRRALTSTELWPVALKEIDLGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA