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The map label for this gene is ptrBa

Identifier: 41406713

GI number: 41406713

Start: 640064

End: 642226

Strand: Direct

Name: ptrBa

Synonym: MAP0615

Alternate gene names: 41406713

Gene position: 640064-642226 (Clockwise)

Preceding gene: 41406712

Following gene: 41406715

Centisome position: 13.25

GC content: 66.81

Gene sequence:

>2163_bases
ATGACCGAGACCCACCTGGCCACCTCCGTGCCGCCCGTCGCCAAGCGGGTGGACACCCGCCGCGAGCATCACGGCGACGT
CTTCGTTGACCCCTACGAGTGGTTGCGGGAGAAGACCGACCCCGACGTCATCGCCCACCTCGAGGCGGAGAACGACTACG
CGGACCGGATGACCGCCCACCTGGCGCCGCTGCGCCAGCAGATCTTCGACGAGATCAAGGCGCGCACCAAAGAGACCGAC
CTGTCCGTGCCGACCCGGCAGGGCCGGTGGTGGTACTACGCCCGCACCTATGAAGGCAAGCAGTATCGCGTCCAATGCCG
TTGTCCCGTAGCCGATCCCGATGACTGGAATCCGCCGAACCTGGACGAGGACACCGAGATCCCGGGCGAGCAGATCATGC
TCGATTCGAACGTCGAAGCCGAGGGTCACGAGTTCTTCGCGCTCGGCGCCGCCACCGTCAGCCTGGACGGGAACCTGCTG
GCGTATTCCGTCGACACCGTCGGCGACGAACGTTATACGTTGCGGTTCAAGGACTTACGGACCGGTGAACTGTATCCGGA
CGAGATCGCCGACATAGCGGCGGGAGCCACCTGGGCCGCCGACAACCGCACCGTGTACTACCTCACCCTGGATGCGGCAC
ACCGTCCCGACAAGGTGTGGCGGTACCAAGCGGGCTCCGGCGAGGCGCCCGAACTGGTGTATCACGAAGCTGACGAGAAG
TTCTGGCTCGGCGTGGGTCTCACCCGGAGCGAGGCCTACGTCATGATCGCCTCGGGCTCCTCGATCACCTCCGAATTCCG
CTACGCCGACGCCGCCGACCCGCACGCGCAGTTCACCGTGGTGCTGCCGCGCCGCGACGGTGTCGAGTACTCGGTCGAGC
ATGCGGTGGTCGGCGGGCAGGACCGGTTTTTGATCCTGCACAACGACGGCGCGGTGAACTTCACCCTCACCGAGGCCCCG
GTCGGCGATCCGACCCGGCAGCGCACCCTGATCCCGCACCGCGACGACGTCCGGCTCGACGCGGTGGACGCCTTCGAAGG
CCACCTTGTCATCAGCTACCGGCGTGCCGCGCTGCCGCGGCTGCAGCTGTGGCGCATCGACGCCGACGGCACATACGCGC
GGCCCGAAGAGATTTCGTTCGACTCCGAGCTGATGTCGGCCGGGCTGGCCGGCAACCCGAACTGGTCGGCGCCCCGGCTG
CGGATCAGGGCCGGCTCGTTGGTCATCCCGGCGCGGGTCTACGACATCGACTTCGTCACCGGGGAGCGGAGCCTGCTGCG
CGAGCAACCCGTGCTGGGGGATTACCGGCCCGCCGACTACGTCGAACGGCGCGACTGGGCCGTCGCCGACGACGGCACCC
GCGTCCCGGTGTCCATCGTGCACCGTGCCGACATTGAATTCCCCGCTCCCGCACTGATTTACGGCTACGGCGCCTACGAG
ATCTGCATCGATCCGAGCTTCTCCATCGCCCGGCTGTCGCTGCTGGACCGCGGCATGGTGTTCGCGATCGCACACGTGCG
CGGTGGCGGCGAGATGGGCCGGCTGTGGTACGAGCACGGCAAGCTTCTGGAGAAGAAGAACACCTTCACCGACTTCATCT
CGGCGGCAAGGCATTTGGTGGAATCGAATGTCACCCGGCCGGATCGGCTGGTGGCGCTGGGCGGCAGTGCCGGCGGCTTG
CTGGTGGGGGCGGTGGCCAACCTGGCTCCGGAGCTGTTCGCCGGGATACTCGCGCAGGTGCCGTTCGTCGATCCGCTGAC
CACCATCCTGGATCCGTCGCTGCCGCTGACCGTCACCGAGTGGGACGAATGGGGAAACCCACTGGCGGACAAGGACGTCT
ACTTCTACATGAAGTCCTACTCGCCGTATGAAAACGTCGAGGCCAGGCGGTATCCGGCGATCATGGCGATGACGTCGCTC
AACGACACCAGGGTGTACTACGTGGAGCCGGCGAAATGGGTTGCCGCACTGCGGCATGCCAACCCGGCCGGCGGCCCGTT
CCTGTTGAAGACCCAGATGAACGCCGGGCACGGTGGCGTCAGCGGCCGCTACAAGGCATGGGAGGAAACCGCCTACCAGT
ACGCGTGGCTGCTAGCGGCCGCCGAGGGCGACCGCTACGGCGGCGGCCAGAAAGACGATCTCCATCCCGATCCGCAGGGG
TAG

Upstream 100 bases:

>100_bases
CGCTGCCCGACCACATCATCGAGGCCACCCGCAACCGCTATATCGAAGCCTACGAACGCATTTCCGGGCTGCGTTTCGAC
GACTGGATCGGTCCGCGCGC

Downstream 100 bases:

>100_bases
CCGGGTCGTCATCGATTTGGGCGGGTCGGGCATCCGCGAGGCGTGGATGTTGGCCGGGAACATGGCCAGCATCAACACCA
GCAGGCAGCCGGCCGCGGCC

Product: PtrBa

Products: NA

Alternate protein names: Oligopeptidase B; Protease II [H]

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MTETHLATSVPPVAKRVDTRREHHGDVFVDPYEWLREKTDPDVIAHLEAENDYADRMTAHLAPLRQQIFDEIKARTKETD
LSVPTRQGRWWYYARTYEGKQYRVQCRCPVADPDDWNPPNLDEDTEIPGEQIMLDSNVEAEGHEFFALGAATVSLDGNLL
AYSVDTVGDERYTLRFKDLRTGELYPDEIADIAAGATWAADNRTVYYLTLDAAHRPDKVWRYQAGSGEAPELVYHEADEK
FWLGVGLTRSEAYVMIASGSSITSEFRYADAADPHAQFTVVLPRRDGVEYSVEHAVVGGQDRFLILHNDGAVNFTLTEAP
VGDPTRQRTLIPHRDDVRLDAVDAFEGHLVISYRRAALPRLQLWRIDADGTYARPEEISFDSELMSAGLAGNPNWSAPRL
RIRAGSLVIPARVYDIDFVTGERSLLREQPVLGDYRPADYVERRDWAVADDGTRVPVSIVHRADIEFPAPALIYGYGAYE
ICIDPSFSIARLSLLDRGMVFAIAHVRGGGEMGRLWYEHGKLLEKKNTFTDFISAARHLVESNVTRPDRLVALGGSAGGL
LVGAVANLAPELFAGILAQVPFVDPLTTILDPSLPLTVTEWDEWGNPLADKDVYFYMKSYSPYENVEARRYPAIMAMTSL
NDTRVYYVEPAKWVAALRHANPAGGPFLLKTQMNAGHGGVSGRYKAWEETAYQYAWLLAAAEGDRYGGGQKDDLHPDPQG

Sequences:

>Translated_720_residues
MTETHLATSVPPVAKRVDTRREHHGDVFVDPYEWLREKTDPDVIAHLEAENDYADRMTAHLAPLRQQIFDEIKARTKETD
LSVPTRQGRWWYYARTYEGKQYRVQCRCPVADPDDWNPPNLDEDTEIPGEQIMLDSNVEAEGHEFFALGAATVSLDGNLL
AYSVDTVGDERYTLRFKDLRTGELYPDEIADIAAGATWAADNRTVYYLTLDAAHRPDKVWRYQAGSGEAPELVYHEADEK
FWLGVGLTRSEAYVMIASGSSITSEFRYADAADPHAQFTVVLPRRDGVEYSVEHAVVGGQDRFLILHNDGAVNFTLTEAP
VGDPTRQRTLIPHRDDVRLDAVDAFEGHLVISYRRAALPRLQLWRIDADGTYARPEEISFDSELMSAGLAGNPNWSAPRL
RIRAGSLVIPARVYDIDFVTGERSLLREQPVLGDYRPADYVERRDWAVADDGTRVPVSIVHRADIEFPAPALIYGYGAYE
ICIDPSFSIARLSLLDRGMVFAIAHVRGGGEMGRLWYEHGKLLEKKNTFTDFISAARHLVESNVTRPDRLVALGGSAGGL
LVGAVANLAPELFAGILAQVPFVDPLTTILDPSLPLTVTEWDEWGNPLADKDVYFYMKSYSPYENVEARRYPAIMAMTSL
NDTRVYYVEPAKWVAALRHANPAGGPFLLKTQMNAGHGGVSGRYKAWEETAYQYAWLLAAAEGDRYGGGQKDDLHPDPQG
>Mature_719_residues
TETHLATSVPPVAKRVDTRREHHGDVFVDPYEWLREKTDPDVIAHLEAENDYADRMTAHLAPLRQQIFDEIKARTKETDL
SVPTRQGRWWYYARTYEGKQYRVQCRCPVADPDDWNPPNLDEDTEIPGEQIMLDSNVEAEGHEFFALGAATVSLDGNLLA
YSVDTVGDERYTLRFKDLRTGELYPDEIADIAAGATWAADNRTVYYLTLDAAHRPDKVWRYQAGSGEAPELVYHEADEKF
WLGVGLTRSEAYVMIASGSSITSEFRYADAADPHAQFTVVLPRRDGVEYSVEHAVVGGQDRFLILHNDGAVNFTLTEAPV
GDPTRQRTLIPHRDDVRLDAVDAFEGHLVISYRRAALPRLQLWRIDADGTYARPEEISFDSELMSAGLAGNPNWSAPRLR
IRAGSLVIPARVYDIDFVTGERSLLREQPVLGDYRPADYVERRDWAVADDGTRVPVSIVHRADIEFPAPALIYGYGAYEI
CIDPSFSIARLSLLDRGMVFAIAHVRGGGEMGRLWYEHGKLLEKKNTFTDFISAARHLVESNVTRPDRLVALGGSAGGLL
VGAVANLAPELFAGILAQVPFVDPLTTILDPSLPLTVTEWDEWGNPLADKDVYFYMKSYSPYENVEARRYPAIMAMTSLN
DTRVYYVEPAKWVAALRHANPAGGPFLLKTQMNAGHGGVSGRYKAWEETAYQYAWLLAAAEGDRYGGGQKDDLHPDPQG

Specific function: Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues [H]

COG id: COG1770

COG function: function code E; Protease II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9A family [H]

Homologues:

Organism=Homo sapiens, GI41349456, Length=730, Percent_Identity=24.6575342465753, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI284172438, Length=457, Percent_Identity=28.8840262582057, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI284172431, Length=457, Percent_Identity=28.8840262582057, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI284172420, Length=457, Percent_Identity=28.8840262582057, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI284172413, Length=457, Percent_Identity=28.8840262582057, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI70778815, Length=457, Percent_Identity=28.8840262582057, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI108860686, Length=264, Percent_Identity=34.0909090909091, Blast_Score=139, Evalue=1e-32,
Organism=Homo sapiens, GI108860692, Length=222, Percent_Identity=37.3873873873874, Blast_Score=135, Evalue=1e-31,
Organism=Escherichia coli, GI1788150, Length=700, Percent_Identity=38.5714285714286, Blast_Score=454, Evalue=1e-128,
Organism=Drosophila melanogaster, GI24583414, Length=737, Percent_Identity=27.2727272727273, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI221510989, Length=703, Percent_Identity=25.0355618776671, Blast_Score=171, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002471
- InterPro:   IPR001375
- InterPro:   IPR002470
- InterPro:   IPR004106 [H]

Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]

EC number: =3.4.21.83 [H]

Molecular weight: Translated: 80513; Mature: 80382

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00708 PRO_ENDOPEP_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETHLATSVPPVAKRVDTRREHHGDVFVDPYEWLREKTDPDVIAHLEAENDYADRMTAH
CCCCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHCCCCCCEEEEEECCCCHHHHHHHH
LAPLRQQIFDEIKARTKETDLSVPTRQGRWWYYARTYEGKQYRVQCRCPVADPDDWNPPN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCC
LDEDTEIPGEQIMLDSNVEAEGHEFFALGAATVSLDGNLLAYSVDTVGDERYTLRFKDLR
CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECC
TGELYPDEIADIAAGATWAADNRTVYYLTLDAAHRPDKVWRYQAGSGEAPELVYHEADEK
CCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCE
FWLGVGLTRSEAYVMIASGSSITSEFRYADAADPHAQFTVVLPRRDGVEYSVEHAVVGGQ
EEEEEEEECCCEEEEEECCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCC
DRFLILHNDGAVNFTLTEAPVGDPTRQRTLIPHRDDVRLDAVDAFEGHLVISYRRAALPR
CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCC
LQLWRIDADGTYARPEEISFDSELMSAGLAGNPNWSAPRLRIRAGSLVIPARVYDIDFVT
EEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEC
GERSLLREQPVLGDYRPADYVERRDWAVADDGTRVPVSIVHRADIEFPAPALIYGYGAYE
CCHHHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCEEEEECCEEE
ICIDPSFSIARLSLLDRGMVFAIAHVRGGGEMGRLWYEHGKLLEKKNTFTDFISAARHLV
EEECCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
ESNVTRPDRLVALGGSAGGLLVGAVANLAPELFAGILAQVPFVDPLTTILDPSLPLTVTE
HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEC
WDEWGNPLADKDVYFYMKSYSPYENVEARRYPAIMAMTSLNDTRVYYVEPAKWVAALRHA
HHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHCC
NPAGGPFLLKTQMNAGHGGVSGRYKAWEETAYQYAWLLAAAEGDRYGGGQKDDLHPDPQG
CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TETHLATSVPPVAKRVDTRREHHGDVFVDPYEWLREKTDPDVIAHLEAENDYADRMTAH
CCCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHCCCCCCEEEEEECCCCHHHHHHHH
LAPLRQQIFDEIKARTKETDLSVPTRQGRWWYYARTYEGKQYRVQCRCPVADPDDWNPPN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCC
LDEDTEIPGEQIMLDSNVEAEGHEFFALGAATVSLDGNLLAYSVDTVGDERYTLRFKDLR
CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECC
TGELYPDEIADIAAGATWAADNRTVYYLTLDAAHRPDKVWRYQAGSGEAPELVYHEADEK
CCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCE
FWLGVGLTRSEAYVMIASGSSITSEFRYADAADPHAQFTVVLPRRDGVEYSVEHAVVGGQ
EEEEEEEECCCEEEEEECCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCC
DRFLILHNDGAVNFTLTEAPVGDPTRQRTLIPHRDDVRLDAVDAFEGHLVISYRRAALPR
CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCC
LQLWRIDADGTYARPEEISFDSELMSAGLAGNPNWSAPRLRIRAGSLVIPARVYDIDFVT
EEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEC
GERSLLREQPVLGDYRPADYVERRDWAVADDGTRVPVSIVHRADIEFPAPALIYGYGAYE
CCHHHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCEEEEECCEEE
ICIDPSFSIARLSLLDRGMVFAIAHVRGGGEMGRLWYEHGKLLEKKNTFTDFISAARHLV
EEECCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
ESNVTRPDRLVALGGSAGGLLVGAVANLAPELFAGILAQVPFVDPLTTILDPSLPLTVTE
HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEC
WDEWGNPLADKDVYFYMKSYSPYENVEARRYPAIMAMTSLNDTRVYYVEPAKWVAALRHA
HHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHCC
NPAGGPFLLKTQMNAGHGGVSGRYKAWEETAYQYAWLLAAAEGDRYGGGQKDDLHPDPQG
CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7629037 [H]