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The map label for this gene is 41406715

Identifier: 41406715

GI number: 41406715

Start: 642698

End: 643261

Strand: Direct

Name: 41406715

Synonym: MAP0617

Alternate gene names: NA

Gene position: 642698-643261 (Clockwise)

Preceding gene: 41406713

Following gene: 41406718

Centisome position: 13.31

GC content: 74.29

Gene sequence:

>564_bases
ATGACGCGCCACAGCTACCACCACGGCGACCTGCCCGCGGTGATCCTGGCCGAAGCCGCGCGGCTGGTGGCCGAGCGCGG
CGCCGAGCGCGTCTCGCTGCGCGAGCTGGCCCGCTGCGCCGGCGTCTCGCACGCCGCGCCGGCGCATCACTTCACCGATC
GGCGCGGGCTGTTCACGGCGCTGGCCACCCAGGGCTTTGAGCTGTTGACCCAGGCGCTGGCCGACGCGCGGGGCGATTTC
GCCGATGCCGCCCTGGCGTATGTGCAGTTCGCCCTCGACCACCCCGGCCACTACCAGGTGATGTTCAACAGGTCGCTGCT
CGATGCGTCCGACGGCGGCCTGGCCGCCGCCGAGGCGGCGGCCGGTGCGGAGCTTTCCCGCGGGGTGGCGACGTTGCGCG
ACCCGCATGCCCGGGCCGACCCGCGCGGCGCCGAACTGGCGGCGTGGTCGCTGGTGCACGGTTTCGCCACGCTGTGGCTC
AACGACGCCGTCGACGCCGCGGTCCGGGCGGCCGATCCGATGGACACGGTCCGGCGGATCGCGACGATGCTGTTCGCCGG
CTGA

Upstream 100 bases:

>100_bases
CCATCCCAACCTCCCGCAATCTAGACACTGACAAGATCTCAGACCGCCGAAGCTACCCTCGGTATCTAGTCATTGTCAAG
ATACGCGGTATGCTGGCCGG

Downstream 100 bases:

>100_bases
CCGGGTCAGTCGCCGGCGGGCGGGCTCGGCGGCTTCCGGGGGAGGAAGGACGCCGGAATGATGGTGCAGGCCACCAGCAC
GACGGCCAGCACGAAGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR; Transcriptional Regulator TetR-Family; Transcription Regulator TetR Family Protein; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulatory Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTRHSYHHGDLPAVILAEAARLVAERGAERVSLRELARCAGVSHAAPAHHFTDRRGLFTALATQGFELLTQALADARGDF
ADAALAYVQFALDHPGHYQVMFNRSLLDASDGGLAAAEAAAGAELSRGVATLRDPHARADPRGAELAAWSLVHGFATLWL
NDAVDAAVRAADPMDTVRRIATMLFAG

Sequences:

>Translated_187_residues
MTRHSYHHGDLPAVILAEAARLVAERGAERVSLRELARCAGVSHAAPAHHFTDRRGLFTALATQGFELLTQALADARGDF
ADAALAYVQFALDHPGHYQVMFNRSLLDASDGGLAAAEAAAGAELSRGVATLRDPHARADPRGAELAAWSLVHGFATLWL
NDAVDAAVRAADPMDTVRRIATMLFAG
>Mature_186_residues
TRHSYHHGDLPAVILAEAARLVAERGAERVSLRELARCAGVSHAAPAHHFTDRRGLFTALATQGFELLTQALADARGDFA
DAALAYVQFALDHPGHYQVMFNRSLLDASDGGLAAAEAAAGAELSRGVATLRDPHARADPRGAELAAWSLVHGFATLWLN
DAVDAAVRAADPMDTVRRIATMLFAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19861; Mature: 19729

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHSYHHGDLPAVILAEAARLVAERGAERVSLRELARCAGVSHAAPAHHFTDRRGLFTA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LATQGFELLTQALADARGDFADAALAYVQFALDHPGHYQVMFNRSLLDASDGGLAAAEAA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCHHHHHH
AGAELSRGVATLRDPHARADPRGAELAAWSLVHGFATLWLNDAVDAAVRAADPMDTVRRI
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATMLFAG
HHHHHCC
>Mature Secondary Structure 
TRHSYHHGDLPAVILAEAARLVAERGAERVSLRELARCAGVSHAAPAHHFTDRRGLFTA
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LATQGFELLTQALADARGDFADAALAYVQFALDHPGHYQVMFNRSLLDASDGGLAAAEAA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCHHHHHH
AGAELSRGVATLRDPHARADPRGAELAAWSLVHGFATLWLNDAVDAAVRAADPMDTVRRI
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATMLFAG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA