| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406635
Identifier: 41406635
GI number: 41406635
Start: 562790
End: 563935
Strand: Direct
Name: 41406635
Synonym: MAP0537
Alternate gene names: NA
Gene position: 562790-563935 (Clockwise)
Preceding gene: 41406634
Following gene: 41406637
Centisome position: 11.65
GC content: 66.93
Gene sequence:
>1146_bases GTGAGCGATCGCACCGACATCGGCACCGTCGAGGAGCTGCACGCATCGGCCACCAAGCTGACCGGGCTCGACGACTTCGG CACCGACGACGACAACTACCTGCAGGCGCTGGAAGTGCTGCTGGACTCCTACCGCCGGGAAGCCGGCCTTACGGTGTTGG GCAGCAAGATGAATCGCTTCTTTCTGCGCGGCGCCCTGGTGGCGCGCCTGCTGTCGGAGTCGGCCTGGAAGCAATACCCG CAGTACGCCGACGTCGCGATCCAACGGCCGATCTTCGTCACCGGCCTGGTGCGCACCGGGACCACGGCGCTGCACCGGCT GCTGGGCGCCGATCCCGCGCATCAGGGTCTGCACATGTGGCTGGCCGAATTCCCGCAGCCGCGGCCGCCGCGCGAGACCT GGGAGTCCAACCCGCTGTACCGTCAGCTCGACGCGCAATTCACCCAACACCACCGGGACAACCCCGGCTACACCGGGCTG CACTTCATGGCCGCCTACGAGCTGGAGGAGTGCTGGCAGCTGCTGCGGCAGTCGCTGCACTCGGTGTCGTATGAAACGCT GGCGCACGTCCCCAGTTACGCGCAGTGGCTGTCCGAACAGGACTGGACGCCGTCGTATCAGCGCCACCGCCGCAACCTTC AGCTGATCGGGCTCAACGACGCCGACAAGCGCTGGGTGCTGAAGAACCCCAGCCACCTGTTCGCGCTGGACGCGTTGATG GCCACCTACCCGGATGCGCTGGTGATCCAGACTCATCGCCCGGTCGAAACGATCATGGCGTCGATGTGCTCGCTGGCCCA GCACACCGCCGAGGGATGGTCGACCACGTTCGTCGGGGCCCAAATCGGCGCTGACGCAATGGATACCTGGTCGCGGGGGC TCGAGCGGTTCAACACCGCACGGGCCAAGTACAACCCGGCGCAGTTCTACGACGTCGACTACAAGGAGTTGATCGCCGAC CCGCTGGGCACCGTGGCCGACATCTACCGGCACTTCGGCCTGACGCTGACCGAGGAGGCGAAGGCGGCCATGGCCAAGAC CCACGCCGACAGCCAGTCCGGCGAGCGGGCCCCCAAGCACAGCTACTCGCTGGCCGACTACGGCCTCAGCGTGGAGACGG TCAAGGAGCGGTTCGCCGGGCTGTGA
Upstream 100 bases:
>100_bases CCGAGGACGAAGTCGCTTCGGCCATCATGTTTTTGGCCAGTGACCTGTCCAGCGGCATCACCGGGCAGACCTTGGACGTC AACTGCGGGGAATACCACAC
Downstream 100 bases:
>100_bases TCGCCCGCGCAGTCAGTCGTCCAGATATCCCTCGGCGACGGCATGCTCGATGCTGTCGCCGAGCTTCGGGCAGGACTTGG TGCGCGCGGTATTGCCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSDRTDIGTVEELHASATKLTGLDDFGTDDDNYLQALEVLLDSYRREAGLTVLGSKMNRFFLRGALVARLLSESAWKQYP QYADVAIQRPIFVTGLVRTGTTALHRLLGADPAHQGLHMWLAEFPQPRPPRETWESNPLYRQLDAQFTQHHRDNPGYTGL HFMAAYELEECWQLLRQSLHSVSYETLAHVPSYAQWLSEQDWTPSYQRHRRNLQLIGLNDADKRWVLKNPSHLFALDALM ATYPDALVIQTHRPVETIMASMCSLAQHTAEGWSTTFVGAQIGADAMDTWSRGLERFNTARAKYNPAQFYDVDYKELIAD PLGTVADIYRHFGLTLTEEAKAAMAKTHADSQSGERAPKHSYSLADYGLSVETVKERFAGL
Sequences:
>Translated_381_residues MSDRTDIGTVEELHASATKLTGLDDFGTDDDNYLQALEVLLDSYRREAGLTVLGSKMNRFFLRGALVARLLSESAWKQYP QYADVAIQRPIFVTGLVRTGTTALHRLLGADPAHQGLHMWLAEFPQPRPPRETWESNPLYRQLDAQFTQHHRDNPGYTGL HFMAAYELEECWQLLRQSLHSVSYETLAHVPSYAQWLSEQDWTPSYQRHRRNLQLIGLNDADKRWVLKNPSHLFALDALM ATYPDALVIQTHRPVETIMASMCSLAQHTAEGWSTTFVGAQIGADAMDTWSRGLERFNTARAKYNPAQFYDVDYKELIAD PLGTVADIYRHFGLTLTEEAKAAMAKTHADSQSGERAPKHSYSLADYGLSVETVKERFAGL >Mature_380_residues SDRTDIGTVEELHASATKLTGLDDFGTDDDNYLQALEVLLDSYRREAGLTVLGSKMNRFFLRGALVARLLSESAWKQYPQ YADVAIQRPIFVTGLVRTGTTALHRLLGADPAHQGLHMWLAEFPQPRPPRETWESNPLYRQLDAQFTQHHRDNPGYTGLH FMAAYELEECWQLLRQSLHSVSYETLAHVPSYAQWLSEQDWTPSYQRHRRNLQLIGLNDADKRWVLKNPSHLFALDALMA TYPDALVIQTHRPVETIMASMCSLAQHTAEGWSTTFVGAQIGADAMDTWSRGLERFNTARAKYNPAQFYDVDYKELIADP LGTVADIYRHFGLTLTEEAKAAMAKTHADSQSGERAPKHSYSLADYGLSVETVKERFAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43106; Mature: 42975
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRTDIGTVEELHASATKLTGLDDFGTDDDNYLQALEVLLDSYRREAGLTVLGSKMNRF CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLRGALVARLLSESAWKQYPQYADVAIQRPIFVTGLVRTGTTALHRLLGADPAHQGLHMW HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHH LAEFPQPRPPRETWESNPLYRQLDAQFTQHHRDNPGYTGLHFMAAYELEECWQLLRQSLH HHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVSYETLAHVPSYAQWLSEQDWTPSYQRHRRNLQLIGLNDADKRWVLKNPSHLFALDALM HHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCEEECCCCHHHHHHHHH ATYPDALVIQTHRPVETIMASMCSLAQHTAEGWSTTFVGAQIGADAMDTWSRGLERFNTA HHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHH RAKYNPAQFYDVDYKELIADPLGTVADIYRHFGLTLTEEAKAAMAKTHADSQSGERAPKH HCCCCCCCEECCCHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC SYSLADYGLSVETVKERFAGL CCCHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SDRTDIGTVEELHASATKLTGLDDFGTDDDNYLQALEVLLDSYRREAGLTVLGSKMNRF CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLRGALVARLLSESAWKQYPQYADVAIQRPIFVTGLVRTGTTALHRLLGADPAHQGLHMW HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHH LAEFPQPRPPRETWESNPLYRQLDAQFTQHHRDNPGYTGLHFMAAYELEECWQLLRQSLH HHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVSYETLAHVPSYAQWLSEQDWTPSYQRHRRNLQLIGLNDADKRWVLKNPSHLFALDALM HHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCEEECCCCHHHHHHHHH ATYPDALVIQTHRPVETIMASMCSLAQHTAEGWSTTFVGAQIGADAMDTWSRGLERFNTA HHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHH RAKYNPAQFYDVDYKELIADPLGTVADIYRHFGLTLTEEAKAAMAKTHADSQSGERAPKH HCCCCCCCEECCCHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC SYSLADYGLSVETVKERFAGL CCCHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA