| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406633
Identifier: 41406633
GI number: 41406633
Start: 560881
End: 562008
Strand: Direct
Name: 41406633
Synonym: MAP0535
Alternate gene names: NA
Gene position: 560881-562008 (Clockwise)
Preceding gene: 41406632
Following gene: 41406634
Centisome position: 11.61
GC content: 66.67
Gene sequence:
>1128_bases GTGTTCTCTGATCCGCTCACCTCCGCGATCGCCGAGGCCGAAAATCTGGTGGCCGCCGCACCGCACATCGAGACCGAAGC CGACCTGCTGGAGGGACTGCAGTACCTGGCCGGCTGCATCTCGGCCTGTATCCACCTGGCGGTCGACTACGAGCGCGACC ACCCCTTCCTGCAATCGGGCACCGGGCCGTTCACCAAGATGGGCCTGGACAACCCCGACACGCTGTACTTCGGCACCCGG GTGCACGCCGGCTACGACTACGTCGTCACCGGCCGCCGCGGCACCACCACCGATTTGAGTTTTCAGCTGCTCGGCGGCGA GTACACCGACGACAACGTGCCGGCCAGCCAGGCCGCGTTCGACGACCGCGAGCTCGACATCGCGCCCGACGGCAGCTTCG AGTGGCGGGTGCGACCGACCAGCAACGGCCAGCTGGTGATCCGCGAGGTGTACGGCGACTGGGCCGCCCAGCGCGGCACC CTGGCCATCGCACGGGAGGACACCGCGGGCACCGCGCCGCCGCCGCTGACCCGCGAGACGATCGAAAAGCGTTATGCCAC AGCCGGAAAACAACTCGTGAACCGGGTGAAGACCTGGCTGCAGTTCCCGCAGTGGTTCTACTTCAACATCCCGGTCAACA CCATGGTCGCGCCCCGGTTGACGCCGGGCGGGCTGGCGACGCAGTACTCGTCGGCCGGGCACTACGAACTGCGGCCCGAC CAGGCGCTGCTGATCACCATCCCGGTCACCGACGCCCCCTACCTCGGGTTCCAACTGGGCAGCCTGTGGTACATCTCGCT GGACTACATCAACCATCAGACGTCGCTGAACAACACTCAGGCGCAAGCGGATCCGGACGGCAAGGTGCGCATCGTCGTCG CCGAGCAGAACCCGGGCGTGACGAACTGGGTGGAGACGGTCGGGCATCGGAAGGGCTTCCTGCAGTTCCGCTGGCAACGG GTGTCGCGCCAGCTCACCGAGGCCGACGGCCCCACCGTCGAGCTGGTCGACTTCGACGCCGTACCCGCCAAGCTGCCCTA CTACGAGCACAACAAGATCTCCGACGACGAATGGCGGGCGCGAATCGCGTTGCGTCAACAACAGATTGCGGCAAGGATGC TGGGGTGA
Upstream 100 bases:
>100_bases GCCCGCCCTAGGTGAGCCGGCCTCGTCGCGCGACGCCGTGGGCGACGCGCGGGAACGTTCGCCATTGACGAAAAAGTAGA ACACGTTCTAGCGTCTAGGC
Downstream 100 bases:
>100_bases CGATGGCAGGGATGCTCGACGGCAAGGTGGTGGTCATCAGCGGCGTGGGGCCGGGGCTGGGCACCACGCTGGCGCACCGA TGCGCCGACAGCGGGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG
Sequences:
>Translated_375_residues MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG >Mature_375_residues MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR VHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAFDDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGT LAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGVTNWVETVGHRKGFLQFRWQR VSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41793; Mature: 41793
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF CCCCEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCC DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET CCCCEEECCCCCEEEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCHHH IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCCCCCCHHCCCCCCCEEECCC QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH RIALRQQQIAARMLG HHHHHHHHHHHHHCC >Mature Secondary Structure MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF CCCCEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCC DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET CCCCEEECCCCCEEEEEEECCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCHHH IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCCCCCCHHCCCCCCCEEECCC QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH RIALRQQQIAARMLG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA