Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is cyp125 [H]

Identifier: 41406620

GI number: 41406620

Start: 547992

End: 549242

Strand: Direct

Name: cyp125 [H]

Synonym: MAP0522

Alternate gene names: 41406620

Gene position: 547992-549242 (Clockwise)

Preceding gene: 41406616

Following gene: 41406621

Centisome position: 11.35

GC content: 65.79

Gene sequence:

>1251_bases
GTGCCCAGTCCGAATCTTCCACCCGGGTTCGACCTTCTGGACCCGGACGTCTGCGTCAAGGGCCTGCCGGTCGCCGAATT
AGCCGAACTGCGCAAGTCCGCGCCAATCTACTGGGTGGACGTCCCCGGCGGGACCGGCGGCTTCGGTGACAAAGGCTATT
GGGCGATCACCAAGCACAAGGACGTCAAAGAGATCTCCGTGCGCAGCGACATCTTCTCGTCGCAGCAGGACTGCGCCATC
CCGGTCTGGCCGAAGGAGATGACGCGCGAGCAGATCGACCTGCAGCGCAACGTCATGCTCAACATGGACGCGCCGCACCA
CACCCGGCTGCGCAAGATCATCTCGCGCGGTTTCACCCCGCGGGCCGTCGGCCGGCTGCGTGACGAGCTGGACGCCCGCG
CGCAGAACATCGCCAAGACCGCCGCCGCGGCCGGCGCCGGCGACTTCGTCGAGCAGGTCTCCTGCGAGCTGCCGCTGCAG
GCCATCGCCGGTCTGCTGGGTGTTCCGCAGGAGGACCGGGACAAGATCTTCCGCTGGTCCAACGAGATGACCGGCAACGA
GGACCCCGAGTACGCGCACATCGACCCGGCGATGTCGTCGGCCGAGCTGATCATGTACGCGATGAAGATGGCCGAGGAGC
GGGCCAAGAACCCCGGCGACGACATCGTCACCCAGCTGATCCAGGCCGACCTCGACGGCGAGAAGCTCTCCGACGACGAA
TTCGGTTTCTTCGTGGTGATGCTCGCGGTCGCCGGCAACGAGACCACCCGGAACTCGATCACGCACGGCATGATCGCCTT
CGCCGACAACCCCGACCAGTGGGAGCTGTTCAAGAAGGAGCGCCCGGAGACCGCGCCGGACGAAATCGTCCGCTGGGCAA
CGCCGGTCACGGCGTTCCAGCGCACCGCGCTCGAGGATTACGAGCTGTCCGGGGTGCAGATCAAGAAGGGCCAGCGGGTG
GTGATGTTCTACCGCTCGGCGAACTTCGACGAAGAGGTCTTCGAGGATCCGCACCGCTTCAACATCTTGCGAAACCCCAA
CCCGCACGTCGGTTTTGGCGGTACGGGTGCGCACTACTGCATCGGCGCCAACCTGGCCCGGATGACCATCAGCCTGATCT
TCAACGCCGTGGCCGACCACATGCCGGACCTCAAGCCGCTGTCGGCGCCCGAGCGGTTGCGGTCGGGCTGGCTCAACGGC
ATCAAGCACTGGCAGGTCGACTACACCGGCAAGTGCCCGGTGGCGCACTGA

Upstream 100 bases:

>100_bases
TGTCTGCGGTGGAGGCATGTTTTACTGGCACCAGAGCATCACTAGGACAGCTAGTGTCCTGGGATCGCAAGTCAGCGAGG
ACTGTAGTTAGGAGAAGAGC

Downstream 100 bases:

>100_bases
GATGGCGTCAGAAACGACGATGGACTTCGACCCCAGTCCGACACAACAGGCGGTCGCCGACGTCGTCACGTCGGTGCTGG
ACCGCGAATTGAGTTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAI
PVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQ
AIAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE
FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRV
VMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNG
IKHWQVDYTGKCPVAH

Sequences:

>Translated_416_residues
MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAI
PVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQ
AIAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE
FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRV
VMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNG
IKHWQVDYTGKCPVAH
>Mature_415_residues
PSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHKDVKEISVRSDIFSSQQDCAIP
VWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTPRAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQA
IAGLLGVPQEDRDKIFRWSNEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDEF
GFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQRTALEDYELSGVQIKKGQRVV
MFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYCIGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGI
KHWQVDYTGKCPVAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 46400; Mature: 46269

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHK
CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCC
DVKEISVRSDIFSSQQDCAIPVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTP
CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCH
RAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQAIAGLLGVPQEDRDKIFRWS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC
NEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQ
CCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHH
RTALEDYELSGVQIKKGQRVVMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYC
HHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHEEEECCCCCCCCCCCCCCCCE
IGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGIKHWQVDYTGKCPVAH
ECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
PSPNLPPGFDLLDPDVCVKGLPVAELAELRKSAPIYWVDVPGGTGGFGDKGYWAITKHK
CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCC
DVKEISVRSDIFSSQQDCAIPVWPKEMTREQIDLQRNVMLNMDAPHHTRLRKIISRGFTP
CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCH
RAVGRLRDELDARAQNIAKTAAAAGAGDFVEQVSCELPLQAIAGLLGVPQEDRDKIFRWS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC
NEMTGNEDPEYAHIDPAMSSAELIMYAMKMAEERAKNPGDDIVTQLIQADLDGEKLSDDE
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
FGFFVVMLAVAGNETTRNSITHGMIAFADNPDQWELFKKERPETAPDEIVRWATPVTAFQ
CCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHH
RTALEDYELSGVQIKKGQRVVMFYRSANFDEEVFEDPHRFNILRNPNPHVGFGGTGAHYC
HHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHEEEECCCCCCCCCCCCCCCCE
IGANLARMTISLIFNAVADHMPDLKPLSAPERLRSGWLNGIKHWQVDYTGKCPVAH
ECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]