| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406532
Identifier: 41406532
GI number: 41406532
Start: 461936
End: 463015
Strand: Direct
Name: 41406532
Synonym: MAP0434
Alternate gene names: NA
Gene position: 461936-463015 (Clockwise)
Preceding gene: 41406528
Following gene: 41406534
Centisome position: 9.56
GC content: 68.15
Gene sequence:
>1080_bases TTGCGCACCTTCGGGGTCTCGCTGTTGGTCACCGCGGCGGCCCTGGTCCTCGGATACGCCTACGGCGGCCCCAAGAGTCT GTACCTGCTGCTGGTGCTGGCGGCCCTCGAGGTGTCGCTGTCCTTCGACAACGCCGTCATCAACGCCGCGGTGCTCAAGC AGATGAGCCGGTTCTGGCAGCGGATGTTCCTGACGATCGGGATCCTGGTCGCCGTGTTCGGGATGCGGCTGCTGTTCCCG TTGCTGATCGTGTGGGCGACCGCGGGCCTCGACCCGGTGCGCGCGCTCGAGTTGGCGCTGCGCCCGCCCCCGCACGGCGC GCTGGAATTTCCCGACGGCTCGCCCAGCTACCAGAAGCTGCTCACCGCCGCCCATCCCCAGATCGCCGCGTTCGGCGGCA TCTTCCTGCTGATGCTGTTCTTGGACTTCCTGCTAATCGATCGAGATATCAAGTGGCTCAAGTGGATTGAGGTTCCGTTC GCCCGCATCGGGCGGCTGGGTCAGGTGTCGGTGGTGCTGAGCGGCCTGACGCTGGTGCTGGTCGGCACCGGGTTGACGCA CTCCAGCCAGGAGGCGGTGACGGTGCTGACCGCCGGACTGCTGGGCATGGTCGCCTACCTGGTGGTCAACGGTTTGAGCC GGGCGTTTCGGCCGTCCGGGGTGGGGCAACCGCAACCGGCCGGCCCGGCGACCGGCTGGGCCGGGCTGAGTCTGTTCCTC TATCTGGAGGTGCTCGACGCCGCCTTCTCGTTCGACGGGGTCACCGGCGCGTTCGCGATCACCTCGGACCCGGTCGTCAT CGTGCTGGGGCTGGGCGCGGTGGGCTCGATGTTCGTCCGGTCGATCACCATCTACCTGGTGCACCAGGAAACGCTGGACC GCTACGTGTACCTGGAACACGGCGCGCACTGGGCGATCGGCGCGCTGGCGGTGATCATGCTGGCGTCCATCGAGCCGCGG CTGACCGTTCCCGAGCCGGTGACCGCGTCGGTCGGGGTGTTCTTCATCGGAACGGCGGTGGGCTTCAGCGTGCTGCGGCG CCGCCGCGAATCCGGGCGGGCTAGTGCTCCTGGGCCTTGA
Upstream 100 bases:
>100_bases GCCACAATTTGAAAATAGTAAGCGGCCCACAGCGTGCGCCGCGGCGGCGATCGGTGTTGGTTAGGGTGGGCGGCGGCCGG AAAGGATCGCAGTGCCCGCT
Downstream 100 bases:
>100_bases ACCGTTCGATCGACCGCTGCACCTCGGCCTCGGCCTCGGCGCGGCCGACCCAGTCGGCGGCCTTGACGAACTTGCCCGGC TCCAGGTCCTTGTAGTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRTFGVSLLVTAAALVLGYAYGGPKSLYLLLVLAALEVSLSFDNAVINAAVLKQMSRFWQRMFLTIGILVAVFGMRLLFP LLIVWATAGLDPVRALELALRPPPHGALEFPDGSPSYQKLLTAAHPQIAAFGGIFLLMLFLDFLLIDRDIKWLKWIEVPF ARIGRLGQVSVVLSGLTLVLVGTGLTHSSQEAVTVLTAGLLGMVAYLVVNGLSRAFRPSGVGQPQPAGPATGWAGLSLFL YLEVLDAAFSFDGVTGAFAITSDPVVIVLGLGAVGSMFVRSITIYLVHQETLDRYVYLEHGAHWAIGALAVIMLASIEPR LTVPEPVTASVGVFFIGTAVGFSVLRRRRESGRASAPGP
Sequences:
>Translated_359_residues MRTFGVSLLVTAAALVLGYAYGGPKSLYLLLVLAALEVSLSFDNAVINAAVLKQMSRFWQRMFLTIGILVAVFGMRLLFP LLIVWATAGLDPVRALELALRPPPHGALEFPDGSPSYQKLLTAAHPQIAAFGGIFLLMLFLDFLLIDRDIKWLKWIEVPF ARIGRLGQVSVVLSGLTLVLVGTGLTHSSQEAVTVLTAGLLGMVAYLVVNGLSRAFRPSGVGQPQPAGPATGWAGLSLFL YLEVLDAAFSFDGVTGAFAITSDPVVIVLGLGAVGSMFVRSITIYLVHQETLDRYVYLEHGAHWAIGALAVIMLASIEPR LTVPEPVTASVGVFFIGTAVGFSVLRRRRESGRASAPGP >Mature_359_residues MRTFGVSLLVTAAALVLGYAYGGPKSLYLLLVLAALEVSLSFDNAVINAAVLKQMSRFWQRMFLTIGILVAVFGMRLLFP LLIVWATAGLDPVRALELALRPPPHGALEFPDGSPSYQKLLTAAHPQIAAFGGIFLLMLFLDFLLIDRDIKWLKWIEVPF ARIGRLGQVSVVLSGLTLVLVGTGLTHSSQEAVTVLTAGLLGMVAYLVVNGLSRAFRPSGVGQPQPAGPATGWAGLSLFL YLEVLDAAFSFDGVTGAFAITSDPVVIVLGLGAVGSMFVRSITIYLVHQETLDRYVYLEHGAHWAIGALAVIMLASIEPR LTVPEPVTASVGVFFIGTAVGFSVLRRRRESGRASAPGP
Specific function: Unknown
COG id: COG2899
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38329; Mature: 38329
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFGVSLLVTAAALVLGYAYGGPKSLYLLLVLAALEVSLSFDNAVINAAVLKQMSRFWQ CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RMFLTIGILVAVFGMRLLFPLLIVWATAGLDPVRALELALRPPPHGALEFPDGSPSYQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LTAAHPQIAAFGGIFLLMLFLDFLLIDRDIKWLKWIEVPFARIGRLGQVSVVLSGLTLVL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHEE VGTGLTHSSQEAVTVLTAGLLGMVAYLVVNGLSRAFRPSGVGQPQPAGPATGWAGLSLFL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH YLEVLDAAFSFDGVTGAFAITSDPVVIVLGLGAVGSMFVRSITIYLVHQETLDRYVYLEH HHHHHHHHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHEEEEHHHHHHEEEEEC GAHWAIGALAVIMLASIEPRLTVPEPVTASVGVFFIGTAVGFSVLRRRRESGRASAPGP CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRTFGVSLLVTAAALVLGYAYGGPKSLYLLLVLAALEVSLSFDNAVINAAVLKQMSRFWQ CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RMFLTIGILVAVFGMRLLFPLLIVWATAGLDPVRALELALRPPPHGALEFPDGSPSYQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LTAAHPQIAAFGGIFLLMLFLDFLLIDRDIKWLKWIEVPFARIGRLGQVSVVLSGLTLVL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHEE VGTGLTHSSQEAVTVLTAGLLGMVAYLVVNGLSRAFRPSGVGQPQPAGPATGWAGLSLFL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH YLEVLDAAFSFDGVTGAFAITSDPVVIVLGLGAVGSMFVRSITIYLVHQETLDRYVYLEH HHHHHHHHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHEEEEHHHHHHEEEEEC GAHWAIGALAVIMLASIEPRLTVPEPVTASVGVFFIGTAVGFSVLRRRRESGRASAPGP CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA