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The map label for this gene is dppB

Identifier: 41406508

GI number: 41406508

Start: 433973

End: 434899

Strand: Direct

Name: dppB

Synonym: MAP0410

Alternate gene names: 41406508

Gene position: 433973-434899 (Clockwise)

Preceding gene: 41406507

Following gene: 41406509

Centisome position: 8.99

GC content: 68.18

Gene sequence:

>927_bases
ATGGGTTGGTACATCGCACGCCGGATCGCCGTCATGGTGCCCGTATTTCTGGGGGCCACCCTGCTGATCTACGCCATGGT
TTTCCTGCTGCCCGGCGACCCGGTGGCCGCGATCGCCGGTGACCGCCCGTTGACGCCCGCGGTGGCCGCGGCGCTGCGGG
CCCGCTACCACCTCGACGATCCGTTCCTGGTGCAGTACCTGCGCTACCTCGGCGGGGTGCTGCGCGGCGACCTGGGCCGG
GCCTATTCCGGGCTGCCCGTCAGTGATGTTCTGGCACATGCCTTTCCGGTCACCCTGCGGCTGTCGTTGATCGCGCTGGC
CGTCGAGGCGGTGCTGGGCATCGGGTTCGGGGTCATCGCGGGGCTGCGCCAGGGCGGCCTGTTCGATTCCGCGGTGCTGA
TCACCGGCCTGGTCATCATCGCGGTCCCCATCTTCGTGCTGGGGTTCTTGGCGCAGTTCGTGTTCGGGGTACGGTTGGGC
ATCGCGCCGGTGACGGTGGGCAACGCCGCCACCTTCACGCGGCTGCTGTTGCCCGGAATCGTGCTGGGCTCGGTGTCTTT
CGCCTACGTGGTGCGGTTGACCCGGTCGGCGGTGGCGGCCAATGCGCACGCCGACTACGTGCGCACCGCCACCGCCAAGG
GATTGTCACAGCCCCGGGTGGTGACGGTGCACATCCTGCGCAATTCGCTGATCCCGGTGGTGACGTTCCTGGGGGCGGAC
CTGGGCGCGCTGATGGGCGGGGCCATCGTCACCGAAGGCATCTTCAACATCCACGGCGTGGGTGGGGTGCTCTACCAGGC
CGTCACCCGGCAGGAGGCCCCCACCGTGGTGTCCATCGTGACGGTGCTGGTGCTGATCTACCTGGTCACCAACCTGGTGG
TGGACCTGTTGTACGCCGTGCTGGACCCCCGGATCCGTTATGGCTGA

Upstream 100 bases:

>100_bases
TGGAACTACATCAGTGTGGTCGGATGGTCGGCGGAAGTCAGCCACGTGACGGTCACCTGGAACGGGCTGCCCGACTACGA
GAACATCGTCAAGGCTTGAC

Downstream 100 bases:

>100_bases
ACGGATCAGGGCGCGGGGCGGATTCTGGCGCGAGACGTGGCGCCGGCTGCGGCGACGCCCGAAGTTCATCGGCGCGGGCC
TGCTGATCCTGGTGATCCTT

Product: hypothetical protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDDPFLVQYLRYLGGVLRGDLGR
AYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAGLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLG
IAPVTVGNAATFTRLLLPGIVLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSQPRVVTVHILRNSLIPVVTFLGAD
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLDPRIRYG

Sequences:

>Translated_308_residues
MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDDPFLVQYLRYLGGVLRGDLGR
AYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAGLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLG
IAPVTVGNAATFTRLLLPGIVLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSQPRVVTVHILRNSLIPVVTFLGAD
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLDPRIRYG
>Mature_307_residues
GWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDDPFLVQYLRYLGGVLRGDLGRA
YSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAGLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLGI
APVTVGNAATFTRLLLPGIVLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSQPRVVTVHILRNSLIPVVTFLGADL
GALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLDPRIRYG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=334, Percent_Identity=37.125748502994, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=35.7377049180328, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=31.6993464052288, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1789888, Length=306, Percent_Identity=32.3529411764706, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1787761, Length=335, Percent_Identity=33.4328358208955, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1788504, Length=366, Percent_Identity=25.6830601092896, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=25, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32464; Mature: 32333

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC
PFLVQYLRYLGGVLRGDLGRAYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLGIAPVTVGNAATFTRLLLPGI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH
VLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSQPRVVTVHILRNSLIPVVTFLGAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYG
HCCCCCCC
>Mature Secondary Structure 
GWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC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HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]