Click here to switch to the map view.

The map label for this gene is dppC

Identifier: 41406509

GI number: 41406509

Start: 434892

End: 435767

Strand: Direct

Name: dppC

Synonym: MAP0411

Alternate gene names: 41406509

Gene position: 434892-435767 (Clockwise)

Preceding gene: 41406508

Following gene: 41406510

Centisome position: 9.0

GC content: 71.12

Gene sequence:

>876_bases
ATGGCTGAACGGATCAGGGCGCGGGGCGGATTCTGGCGCGAGACGTGGCGCCGGCTGCGGCGACGCCCGAAGTTCATCGG
CGCGGGCCTGCTGATCCTGGTGATCCTTGCCGTGGCGCTGTTCCCCGCGCTGTTCACCGCCGCCGATCCCACCTACGCCG
ATCCCGCCCAGAGCATGTTGCCGCCGTCGCGCACGCACTGGTTCGGCACCGATCTGCAGGGCCACGACGTGTACGCCCGC
ACCGTGTACGGGGCGCGCGCCTCGGTCACCGTCGGGTTGGGCGCCGCGGCGATCGTCTTCGTGGTCGGCGGCGCACTGGG
CGCGCTGGCCGGCTTCTACGGCGGCTGGATCGACGCGGTGGTCTCCCGGGTCACCGACGTGTTCTTCGGGCTGCCGCTGC
TGCTGGTCGCGATCGTCCTGATGCAGGTGCTGCACCACCGCACGGTGTGGACGGTGATCGCGATCCTGGCGTTGTTCGGC
TGGCCCCAGGTGGCCCGGATCGCGCGTGGGGCGGTCCTGGCGGTGCGCGCCAGCGACTACGTGCTTGCGGCTAAAGCGTT
GGGCATGAGCAGGTTTCAGATCCTGATCCGGCACGCGCTGCCGAACGCGCTGGGGCCGGTGATCGCGGTGGCCACCATCG
CGCTGGGTCTTTTCATCGTCACCGAGGCAACGTTGTCCTACCTCGGCGTGGGGCTGCCGCCGTCGGTGGTGTCGTGGGGC
GGCGACATCAACCTCGCCCAGACGCGGCTGCGGGCCGGTTCGCCGATCCTGTTCTATCCGGCCGGCGCGCTGGCGGCGAC
CGTGCTGGCCTTCATGATGATGGGCGACGCGCTGCGCGACGCCCTCGACCCGGCGTCGCGGGCGTGGCGCGCATGA

Upstream 100 bases:

>100_bases
CCCACCGTGGTGTCCATCGTGACGGTGCTGGTGCTGATCTACCTGGTCACCAACCTGGTGGTGGACCTGTTGTACGCCGT
GCTGGACCCCCGGATCCGTT

Downstream 100 bases:

>100_bases
CCACCCCGCTGCTGTCGGTCGAGGGCCTGCATGTCGGGTTCGGCGAGCACGCCGCGGTGCGCGGCCTGGATTTGCGGGTA
CTGCCCGGCCAGACCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAERIRARGGFWRETWRRLRRRPKFIGAGLLILVILAVALFPALFTAADPTYADPAQSMLPPSRTHWFGTDLQGHDVYAR
TVYGARASVTVGLGAAAIVFVVGGALGALAGFYGGWIDAVVSRVTDVFFGLPLLLVAIVLMQVLHHRTVWTVIAILALFG
WPQVARIARGAVLAVRASDYVLAAKALGMSRFQILIRHALPNALGPVIAVATIALGLFIVTEATLSYLGVGLPPSVVSWG
GDINLAQTRLRAGSPILFYPAGALAATVLAFMMMGDALRDALDPASRAWRA

Sequences:

>Translated_291_residues
MAERIRARGGFWRETWRRLRRRPKFIGAGLLILVILAVALFPALFTAADPTYADPAQSMLPPSRTHWFGTDLQGHDVYAR
TVYGARASVTVGLGAAAIVFVVGGALGALAGFYGGWIDAVVSRVTDVFFGLPLLLVAIVLMQVLHHRTVWTVIAILALFG
WPQVARIARGAVLAVRASDYVLAAKALGMSRFQILIRHALPNALGPVIAVATIALGLFIVTEATLSYLGVGLPPSVVSWG
GDINLAQTRLRAGSPILFYPAGALAATVLAFMMMGDALRDALDPASRAWRA
>Mature_290_residues
AERIRARGGFWRETWRRLRRRPKFIGAGLLILVILAVALFPALFTAADPTYADPAQSMLPPSRTHWFGTDLQGHDVYART
VYGARASVTVGLGAAAIVFVVGGALGALAGFYGGWIDAVVSRVTDVFFGLPLLLVAIVLMQVLHHRTVWTVIAILALFGW
PQVARIARGAVLAVRASDYVLAAKALGMSRFQILIRHALPNALGPVIAVATIALGLFIVTEATLSYLGVGLPPSVVSWGG
DINLAQTRLRAGSPILFYPAGALAATVLAFMMMGDALRDALDPASRAWRA

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=36.101083032491, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1787760, Length=268, Percent_Identity=32.8358208955224, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788505, Length=244, Percent_Identity=37.7049180327869, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1787498, Length=292, Percent_Identity=32.8767123287671, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=31.7796610169492, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789964, Length=281, Percent_Identity=31.3167259786477, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787549, Length=235, Percent_Identity=27.2340425531915, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31080; Mature: 30949

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERIRARGGFWRETWRRLRRRPKFIGAGLLILVILAVALFPALFTAADPTYADPAQSML
CCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
PPSRTHWFGTDLQGHDVYARTVYGARASVTVGLGAAAIVFVVGGALGALAGFYGGWIDAV
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSRVTDVFFGLPLLLVAIVLMQVLHHRTVWTVIAILALFGWPQVARIARGAVLAVRASDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCH
VLAAKALGMSRFQILIRHALPNALGPVIAVATIALGLFIVTEATLSYLGVGLPPSVVSWG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
GDINLAQTRLRAGSPILFYPAGALAATVLAFMMMGDALRDALDPASRAWRA
CCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure 
AERIRARGGFWRETWRRLRRRPKFIGAGLLILVILAVALFPALFTAADPTYADPAQSML
CCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
PPSRTHWFGTDLQGHDVYARTVYGARASVTVGLGAAAIVFVVGGALGALAGFYGGWIDAV
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSRVTDVFFGLPLLLVAIVLMQVLHHRTVWTVIAILALFGWPQVARIARGAVLAVRASDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCH
VLAAKALGMSRFQILIRHALPNALGPVIAVATIALGLFIVTEATLSYLGVGLPPSVVSWG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
GDINLAQTRLRAGSPILFYPAGALAATVLAFMMMGDALRDALDPASRAWRA
CCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]