| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406376
Identifier: 41406376
GI number: 41406376
Start: 296023
End: 296544
Strand: Direct
Name: 41406376
Synonym: MAP0278
Alternate gene names: NA
Gene position: 296023-296544 (Clockwise)
Preceding gene: 41406374
Following gene: 41406377
Centisome position: 6.13
GC content: 68.97
Gene sequence:
>522_bases ATGGGAGCACAACGGGCCTCTGCCCAGGGCCTGTCCGCGGACACGCCGGACGGTTTCGGTGTCGCGGTGGTGCGTGAAGA GGGGCAGTGGCGCTGCGCCCCGATGGCCCCCAAGTCGCTGACGAGCCTGTCGGCCGCCGAGACCGAACTGCGCGAACTGC GCAGCTCCGGCGCGGTGTTCGGGCTGCTCGACGTGGACGACGAATTCTTCGTCATCGTGCGGCCCGCGCCGTCGGGCACG CGATTGCTGCTCTCGGACGCCACCGCCGCGCTGGACTACGACATCGCCGCCGAGGTGCTCGACAAGCTGGACGCCGACAT CGACCCGGAGGACCTCGAGGATTCAGATCCCTTCGAGGAGGGCGACTTAGGGCTGCTCTCCGACATCGGCCTGCCCGAGG CGGTGTTGGGCGTCATCCTCGACGAGACCGATCTGTACGCCGACGAGCAGCTGGGCCGCATTGCCCGCGAGATGGGCTTC GCCGATCAGCTGTCGGCGGTGATCGACCGCCTCGGTCGGTGA
Upstream 100 bases:
>100_bases CCCAGGTTGGCACATCCGGCGCGCGACGCCGCGTGCAGATGTCGGGGCGCCCGTGCTCCATCTGGTCAGGGGGCCTGGTC AGGGACTACCGTAAGCGGCC
Downstream 100 bases:
>100_bases TTTCTGACGAAGACCTGATCCGTTCCGCGCTGGCGGTTGCCGCGACGGCGGGTCCCCGCGACGTGCCCATCGGCGCGGTG GTGGTCGGCGCCGACGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGAQRASAQGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVFGLLDVDDEFFVIVRPAPSGT RLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGF ADQLSAVIDRLGR
Sequences:
>Translated_173_residues MGAQRASAQGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVFGLLDVDDEFFVIVRPAPSGT RLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGF ADQLSAVIDRLGR >Mature_172_residues GAQRASAQGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVFGLLDVDDEFFVIVRPAPSGTR LLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGFA DQLSAVIDRLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18441; Mature: 18309
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAQRASAQGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVF CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE GLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEE EEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR CCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure GAQRASAQGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVF CCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE GLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEE EEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR CCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA