| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406374
Identifier: 41406374
GI number: 41406374
Start: 294374
End: 294973
Strand: Direct
Name: 41406374
Synonym: MAP0276
Alternate gene names: NA
Gene position: 294374-294973 (Clockwise)
Preceding gene: 41406373
Following gene: 41406376
Centisome position: 6.09
GC content: 67.0
Gene sequence:
>600_bases GTGAACGCAGCCCCTTCTGACCCGTCTCGCCGAGTGTGGCAGGCGATGCTCACCTGGCGCGCACAGGACGTCTCCCGGAT GGAATCGGTACGACTCCAGGTGTCCGGCAACAGAATCAAGGCCAACGGCCGCATCGTCGCCGCCGCCACCGACGCCAATC CGGCGTTCGGCGCCTACTACGACCTGCAGACCGACGAAACCGGCGCCACCAAGCGGCTCGGCATGACCGTCACCCTGGCC GAGCGTGAGCGTGTCTTCTCCTTCGCCCGCGACGAGGAGAACATGTGGCTGGTCACCGACCCCCAGGGCGAGCACCGCGC GGCCTACAACGGCGCCCTCGACGTCGACGTCGAGTTCAGCCCGTTCTTCAACGCGCTGCCGATCCGGCGGCTCGGCCTGC AGGAGCGGGCGGCCTCGGTCACCCTGCCCGTCGTCTACGTCAACGTGCCGGAGATGTCCATCACCGCCGACACCGTGAGC TACAGCAGCACCGGCAGCCGCGACGAGATCAAGGTGCACTCGCCGATCTCCGACACCACGGTCAGCGTCGACGAGCAGGG ATTCATCGTGGACTATCCAGGGTTGGCAGAGCGGATCTGA
Upstream 100 bases:
>100_bases GGCCGTGGCGGTGTGGGCGTCAGTGCCGGGTACCGGCCGGCTGCGGCGCACATACCGGCCACTTCCGCACCGGTTGGCGG GGACGTCTTACGGTAGATGA
Downstream 100 bases:
>100_bases TCACCCCGCCCGCCCGGCCGGCGGCGGCCAGTTCCTGACGCCAGTTCTCCGCGCCGATCACCACGTGGAAGATGTCGGTG CGCGGGAAGCTGTCGTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNAAPSDPSRRVWQAMLTWRAQDVSRMESVRLQVSGNRIKANGRIVAAATDANPAFGAYYDLQTDETGATKRLGMTVTLA ERERVFSFARDEENMWLVTDPQGEHRAAYNGALDVDVEFSPFFNALPIRRLGLQERAASVTLPVVYVNVPEMSITADTVS YSSTGSRDEIKVHSPISDTTVSVDEQGFIVDYPGLAERI
Sequences:
>Translated_199_residues MNAAPSDPSRRVWQAMLTWRAQDVSRMESVRLQVSGNRIKANGRIVAAATDANPAFGAYYDLQTDETGATKRLGMTVTLA ERERVFSFARDEENMWLVTDPQGEHRAAYNGALDVDVEFSPFFNALPIRRLGLQERAASVTLPVVYVNVPEMSITADTVS YSSTGSRDEIKVHSPISDTTVSVDEQGFIVDYPGLAERI >Mature_199_residues MNAAPSDPSRRVWQAMLTWRAQDVSRMESVRLQVSGNRIKANGRIVAAATDANPAFGAYYDLQTDETGATKRLGMTVTLA ERERVFSFARDEENMWLVTDPQGEHRAAYNGALDVDVEFSPFFNALPIRRLGLQERAASVTLPVVYVNVPEMSITADTVS YSSTGSRDEIKVHSPISDTTVSVDEQGFIVDYPGLAERI
Specific function: Unknown
COG id: COG3554
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22004; Mature: 22004
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAPSDPSRRVWQAMLTWRAQDVSRMESVRLQVSGNRIKANGRIVAAATDANPAFGAYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCEEEEEECCCCCCCCEEE DLQTDETGATKRLGMTVTLAERERVFSFARDEENMWLVTDPQGEHRAAYNGALDVDVEFS EECCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCEECCCEEEEEEECC PFFNALPIRRLGLQERAASVTLPVVYVNVPEMSITADTVSYSSTGSRDEIKVHSPISDTT CCCCCCCHHHHCCHHHCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCCE VSVDEQGFIVDYPGLAERI EEECCCCEEEECCCHHHCC >Mature Secondary Structure MNAAPSDPSRRVWQAMLTWRAQDVSRMESVRLQVSGNRIKANGRIVAAATDANPAFGAYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCEEEEEECCCCCCCCEEE DLQTDETGATKRLGMTVTLAERERVFSFARDEENMWLVTDPQGEHRAAYNGALDVDVEFS EECCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCEECCCEEEEEEECC PFFNALPIRRLGLQERAASVTLPVVYVNVPEMSITADTVSYSSTGSRDEIKVHSPISDTT CCCCCCCHHHHCCHHHCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCCE VSVDEQGFIVDYPGLAERI EEECCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA