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The map label for this gene is tadA [H]

Identifier: 41406377

GI number: 41406377

Start: 296541

End: 296999

Strand: Direct

Name: tadA [H]

Synonym: MAP0279

Alternate gene names: 41406377

Gene position: 296541-296999 (Clockwise)

Preceding gene: 41406376

Following gene: 41406378

Centisome position: 6.14

GC content: 74.51

Gene sequence:

>459_bases
GTGATTTCTGACGAAGACCTGATCCGTTCCGCGCTGGCGGTTGCCGCGACGGCGGGTCCCCGCGACGTGCCCATCGGCGC
GGTGGTGGTCGGCGCCGACGGCACCGAACTGGCCCGGGCGGTCAACGCGCGCGAGGCGCTGGGGGATCCGACCGCGCACG
CCGAAATCCTGGCGCTGCGGGCTGCGGCCGCCGCGCTCGGGGACGGGTGGCGGCTGGAAGGCGCCACGCTGGCCGTCACC
GTCGAACCGTGCACCATGTGCGCGGGCGCGCTGGTGCTCGCGCGCATCGCCCGGCTGGTGTTCGGTGCCTGGGAGCCCAA
GACCGGCGCGGTCGGATCGCTGTGGGATGTGGTGCGCGATCGGCGGCTCAACCACCGCCCGGAAGTCCGCGGCGGGGTGC
TGGAGCGAGAGTGCGCCGCGCCGCTGGAGGGCTTCTTCGCCCGCCAGCGATTGGGGTGA

Upstream 100 bases:

>100_bases
TCGACGAGACCGATCTGTACGCCGACGAGCAGCTGGGCCGCATTGCCCGCGAGATGGGCTTCGCCGATCAGCTGTCGGCG
GTGATCGACCGCCTCGGTCG

Downstream 100 bases:

>100_bases
CCGGCATGACGTTCGGTAAGCTGCTCGACGGTGGCGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGACGGC
TAACACCGTCCGAGGGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAALGDGWRLEGATLAVT
VEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLERECAAPLEGFFARQRLG

Sequences:

>Translated_152_residues
MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAALGDGWRLEGATLAVT
VEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLERECAAPLEGFFARQRLG
>Mature_152_residues
MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAALGDGWRLEGATLAVT
VEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLERECAAPLEGFFARQRLG

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=150, Percent_Identity=47.3333333333333, Blast_Score=120, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17541138, Length=148, Percent_Identity=32.4324324324324, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15859; Mature: 15859

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALR
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRD
HHHHHHCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
RRLNHRPEVRGGVLERECAAPLEGFFARQRLG
HHCCCCCCCCCCCHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALR
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRD
HHHHHHCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
RRLNHRPEVRGGVLERECAAPLEGFFARQRLG
HHCCCCCCCCCCCHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]