| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yehX [H]
Identifier: 41406371
GI number: 41406371
Start: 292141
End: 292974
Strand: Direct
Name: yehX [H]
Synonym: MAP0273
Alternate gene names: 41406371
Gene position: 292141-292974 (Clockwise)
Preceding gene: 41406370
Following gene: 41406372
Centisome position: 6.05
GC content: 69.66
Gene sequence:
>834_bases ATGCCGCACCAGAGGGTGATCGACAACGTGGCAACGGTTCCCGTGCTGCGCGGCCAGCGTCGGCGGGCCGCCCGCACGGC GGCCTACCAGGTGCTCGAGCGCGTCGGGCTGGACGTCAAGTTGGCCCGGCGCTATCCCGCCCAGCTCTCCGGCGGGGAAC AACAACGGGTCGGCGTGGCTCGCGCGCTGGCCGCCGACCCGCCGATCCTGCTGATGGACGAGCCGTTCTCTGCCGTCGAT CCGGTGGTGCGTCACGACCTGCAAAACGAAATACTGCGGCTGCAAAGCGAATTGCACAAAACCATCGTCTTCGTCACGCA CGACATCGACGAGGCGCTGCGGCTCGGCGAACGGGTCGCGGTGTTCAAGGGCGGCGTGTTGCAGCAGTGCGACGAGCCCG CCCGGCTGCTGTCCCGCCCGGCCAACGACTTCGTGTCGAGGTTCATCGGTCTGGGCCGTGGCTACCGATGGTTGCAACTC ATCGACGCCGCCGGGCTGCCGGTGCACGACGTCCCCCGCCTGTCCGCCGAAAACCTGTCGGGTGCAGATGTTTTCGATGG TTGGGCCGTCGTGGTCGACGAGGCCGGGGCGCCGCTGGGCTGGATCGACGCCGAGGGCCTGCGCCGACACCGCGACGGCC TGGCGCTGTCCGACAGCATGACCGGCGTCGGATCGCTGTTTCGGCCGCGGGGCAACCTGAGCCAGGCGCTGGACGCCGCG CTGTCGTCGCCGTCGGGAATCGGTGTCGCCGTCGACGACGACGGCAGGGTGATCGGCGGTGTGCTGGCCGCCGACGTGCT GGCCGCGGTGGAATCGCAGCGAAAGAGCCGCTGA
Upstream 100 bases:
>100_bases CACGTCCGGCACCATCAGCATCGACGGTGTCGACGTGTCCACCCTCGACCCGGTCAAACTGCGCCTGGGCATCGGCTACG TCATCCAGCATGCCGGGCTG
Downstream 100 bases:
>100_bases TGCACTATCTGCTCACCCATCTCGACGACGCGGCCCGGCTCACCGTCGTGCACCTGCGGCTGGCGCTGGTGCCGGTGCTG ATCGGGTTGGCGATCGCGCT
Product: hypothetical protein
Products: ADP; phosphate; quaternary amine
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVD PVVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVAVFKGGVLQQCDEPARLLSRPANDFVSRFIGLGRGYRWLQL IDAAGLPVHDVPRLSAENLSGADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNLSQALDAA LSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR
Sequences:
>Translated_277_residues MPHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVD PVVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVAVFKGGVLQQCDEPARLLSRPANDFVSRFIGLGRGYRWLQL IDAAGLPVHDVPRLSAENLSGADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNLSQALDAA LSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR >Mature_276_residues PHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDP VVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVAVFKGGVLQQCDEPARLLSRPANDFVSRFIGLGRGYRWLQLI DAAGLPVHDVPRLSAENLSGADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNLSQALDAAL SSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR
Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for energy coupling to the transport system [H]
COG id: COG1125
COG function: function code E; ABC-type proline/glycine betaine transport systems, ATPase components
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=126, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI116734710, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1788450, Length=161, Percent_Identity=52.1739130434783, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1789032, Length=149, Percent_Identity=47.6510067114094, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1787712, Length=150, Percent_Identity=43.3333333333333, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1788761, Length=152, Percent_Identity=45.3947368421053, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787370, Length=152, Percent_Identity=43.421052631579, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1786563, Length=149, Percent_Identity=40.2684563758389, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87082267, Length=149, Percent_Identity=38.255033557047, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788644, Length=151, Percent_Identity=37.7483443708609, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790467, Length=149, Percent_Identity=37.5838926174497, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787029, Length=153, Percent_Identity=36.6013071895425, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786872, Length=154, Percent_Identity=37.6623376623377, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87081791, Length=152, Percent_Identity=36.8421052631579, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788506, Length=238, Percent_Identity=31.5126050420168, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87081709, Length=150, Percent_Identity=34.6666666666667, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788225, Length=156, Percent_Identity=37.1794871794872, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786398, Length=144, Percent_Identity=34.7222222222222, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789672, Length=152, Percent_Identity=33.5526315789474, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787089, Length=151, Percent_Identity=34.4370860927152, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=125, Percent_Identity=43.2, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI145693107, Length=128, Percent_Identity=35.15625, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1787500, Length=105, Percent_Identity=35.2380952380952, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786703, Length=129, Percent_Identity=36.4341085271318, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786253, Length=97, Percent_Identity=37.1134020618557, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789962, Length=101, Percent_Identity=37.6237623762376, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789873, Length=126, Percent_Identity=39.6825396825397, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787758, Length=127, Percent_Identity=32.2834645669291, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1789891, Length=98, Percent_Identity=37.7551020408163, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790162, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790544, Length=112, Percent_Identity=36.6071428571429, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87081834, Length=129, Percent_Identity=35.6589147286822, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1787759, Length=177, Percent_Identity=29.9435028248588, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787105, Length=108, Percent_Identity=37.037037037037, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789963, Length=139, Percent_Identity=27.3381294964029, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994997, Length=125, Percent_Identity=32, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789864, Length=134, Percent_Identity=28.3582089552239, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1789593, Length=109, Percent_Identity=35.7798165137615, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787547, Length=126, Percent_Identity=28.5714285714286, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71983523, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71983516, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71983510, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565586, Length=109, Percent_Identity=34.8623853211009, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI281362751, Length=114, Percent_Identity=35.9649122807018, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24650855, Length=114, Percent_Identity=35.9649122807018, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24650853, Length=114, Percent_Identity=35.9649122807018, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574150, Length=141, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007328, Length=141, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85725262, Length=100, Percent_Identity=33, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: 3.6.3.32
Molecular weight: Translated: 29917; Mature: 29786
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHH RALAADPPILLMDEPFSAVDPVVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVA HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHH VFKGGVLQQCDEPARLLSRPANDFVSRFIGLGRGYRWLQLIDAAGLPVHDVPRLSAENLS HHCCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNLSQALDAA CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCHHHHHHHCCCCCHHHHHHHH LSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR HCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHH RALAADPPILLMDEPFSAVDPVVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVA HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHH VFKGGVLQQCDEPARLLSRPANDFVSRFIGLGRGYRWLQLIDAAGLPVHDVPRLSAENLS HHCCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNLSQALDAA CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCHHHHHHHCCCCCHHHHHHHH LSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR HCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; quaternary amine
Specific reaction: ATP + H2O + quaternary amine(out) = ADP + phosphate + quaternary amine(in)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]