| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406211
Identifier: 41406211
GI number: 41406211
Start: 123748
End: 124998
Strand: Direct
Name: 41406211
Synonym: MAP0113
Alternate gene names: NA
Gene position: 123748-124998 (Clockwise)
Preceding gene: 41406210
Following gene: 41406212
Centisome position: 2.56
GC content: 68.51
Gene sequence:
>1251_bases GTGATCGACACCCTCGGCCGTCTCGTCGTCGGCGTGGTGAAAGCCGGCCACCGCCAACGGACCTGGCTGTCCGGGCTCGC CCTGCTGGTCGCGCTCGTGGTCGGCGCGGCCTACCTGGCGCTCGGCGCCCTGCGGGTCAACCCGCTGGAGTCGACCTACC AGGTCACCATCCGGCTGCCCGAATCCGGCGGACTGCTGGCCAACCAGGACGTGTCCGTCCGCGGCATCCGGGTCGGGCGG ATCAGATCGCTGCGACCGATCCCGAGCGGTGTCGAGGTCGTCGCCAACATCAACGCGCACACCAGGATTCCCGCATCCAG CCCGGTGCGGGTGTCCGGGTTGTCCCCCGCGGGCGAGCAGTACATCGACTTCGAGCCCACCTCCAACACCGGCCCGTTCC TATCGGACGGCAGCGTGATCGGCCCGCAACACACCACCACGCCCATCCCGCTGTCGCAGGTGCTGGCCGACGCCGACGGG CTGCTTGCCCAGACCGACCCGAAGAAACTCGAAATCGTCAAGCGGGAGCTGAGTTTGAGCAACCAGGGCCCGCAAAAACT CACCGACATCATCGACGGATCCACCTTCCTGCTCTCCACCATGGACCCGGTGCTGCCGCAGACGGTCAGCATGCTCAAGA CCAGCCGCGTCGCGCTGACCACCCTCTCCGACAAGAACGCCGGCCTCTCGGTCGCCGCCCGCAACGTCGGCGACCTGATG GCCGGTGTGAACAAGATGGACCGCGGCTACCGCCGCCTCGTCGACCAGACCCCGCATGCGTTGTCCACGGTGGACAACCT GTTCGACGACAATTCCGACACCATGGTCGGGCTGCTGGCCAACCTGGTCACCACCGCGCGGGTCGTCTACCTGCGGGTCC CGGCGCTCAACGCGGTCTTCCCCAACTACCGCGGGTCCACGCTCGAGGCGTTGATGACCACCATGCACGAACATGGCCTG TGGGCCACCGCCGATATCTACCCTCGCTACACCTGCGACTACGGCACCCCCCGGCGCCCGTCGTCATCGGCGGACTACCC CGAACCGTTCCTGTACACCTACTGCCGAGACGACGACCCACAGGTGCTGGTCCGCGGGGCCAAGAATGCGCCCCGCCCGG GCGGCGACGACACCGCGGGGCCGCCCCCCGGGGCGGATCTCGGTCAAACCACCGACCCAACACCCAAGGGCCGCTTCACC ATTCCGACGCCCTACGGCGGGCCGGTGCTGCCCATCGAGCCGCCGCACTGA
Upstream 100 bases:
>100_bases CCCCGATGGGCCAGAGCCCGTGGACGCCGTCCGGTCCGCCGCTGCCGCCGGCCCCCGCCGGGCAGGCGCCCCCGGATCCC ATGGTCCCGGAGCCACCGCG
Downstream 100 bases:
>100_bases ACCCACCTCAAGACCGCAAGGAGACAACAGCGTGACCGTCACCGCCGACCAGGAACGCGCCACCGCCGACGATGTCGAGC AGCCGCCCGACGATGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; Mce Family F; MCE Family Protein; MCE-Family Protein; MCE-Family; MCE-Family F; Mce-Family F; Mce Related Protein; Mce Family; Mce-Related Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT IPTPYGGPVLPIEPPH
Sequences:
>Translated_416_residues MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT IPTPYGGPVLPIEPPH >Mature_416_residues MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT IPTPYGGPVLPIEPPH
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44511; Mature: 44511
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLP CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEC ESGGLLANQDVSVRGIRVGRIRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQ CCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCCC YIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADGLLAQTDPKKLEIVKRELSLS EEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHCC NQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM CCCHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHH AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVF HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHC PNYRGSTLEALMTTMHEHGLWATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDP CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCH QVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFTIPTPYGGPVLPIEPPH HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLP CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEC ESGGLLANQDVSVRGIRVGRIRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQ CCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCCC YIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADGLLAQTDPKKLEIVKRELSLS EEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHCC NQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM CCCHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHH AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVF HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHC PNYRGSTLEALMTTMHEHGLWATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDP CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCH QVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFTIPTPYGGPVLPIEPPH HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA