Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406211

Identifier: 41406211

GI number: 41406211

Start: 123748

End: 124998

Strand: Direct

Name: 41406211

Synonym: MAP0113

Alternate gene names: NA

Gene position: 123748-124998 (Clockwise)

Preceding gene: 41406210

Following gene: 41406212

Centisome position: 2.56

GC content: 68.51

Gene sequence:

>1251_bases
GTGATCGACACCCTCGGCCGTCTCGTCGTCGGCGTGGTGAAAGCCGGCCACCGCCAACGGACCTGGCTGTCCGGGCTCGC
CCTGCTGGTCGCGCTCGTGGTCGGCGCGGCCTACCTGGCGCTCGGCGCCCTGCGGGTCAACCCGCTGGAGTCGACCTACC
AGGTCACCATCCGGCTGCCCGAATCCGGCGGACTGCTGGCCAACCAGGACGTGTCCGTCCGCGGCATCCGGGTCGGGCGG
ATCAGATCGCTGCGACCGATCCCGAGCGGTGTCGAGGTCGTCGCCAACATCAACGCGCACACCAGGATTCCCGCATCCAG
CCCGGTGCGGGTGTCCGGGTTGTCCCCCGCGGGCGAGCAGTACATCGACTTCGAGCCCACCTCCAACACCGGCCCGTTCC
TATCGGACGGCAGCGTGATCGGCCCGCAACACACCACCACGCCCATCCCGCTGTCGCAGGTGCTGGCCGACGCCGACGGG
CTGCTTGCCCAGACCGACCCGAAGAAACTCGAAATCGTCAAGCGGGAGCTGAGTTTGAGCAACCAGGGCCCGCAAAAACT
CACCGACATCATCGACGGATCCACCTTCCTGCTCTCCACCATGGACCCGGTGCTGCCGCAGACGGTCAGCATGCTCAAGA
CCAGCCGCGTCGCGCTGACCACCCTCTCCGACAAGAACGCCGGCCTCTCGGTCGCCGCCCGCAACGTCGGCGACCTGATG
GCCGGTGTGAACAAGATGGACCGCGGCTACCGCCGCCTCGTCGACCAGACCCCGCATGCGTTGTCCACGGTGGACAACCT
GTTCGACGACAATTCCGACACCATGGTCGGGCTGCTGGCCAACCTGGTCACCACCGCGCGGGTCGTCTACCTGCGGGTCC
CGGCGCTCAACGCGGTCTTCCCCAACTACCGCGGGTCCACGCTCGAGGCGTTGATGACCACCATGCACGAACATGGCCTG
TGGGCCACCGCCGATATCTACCCTCGCTACACCTGCGACTACGGCACCCCCCGGCGCCCGTCGTCATCGGCGGACTACCC
CGAACCGTTCCTGTACACCTACTGCCGAGACGACGACCCACAGGTGCTGGTCCGCGGGGCCAAGAATGCGCCCCGCCCGG
GCGGCGACGACACCGCGGGGCCGCCCCCCGGGGCGGATCTCGGTCAAACCACCGACCCAACACCCAAGGGCCGCTTCACC
ATTCCGACGCCCTACGGCGGGCCGGTGCTGCCCATCGAGCCGCCGCACTGA

Upstream 100 bases:

>100_bases
CCCCGATGGGCCAGAGCCCGTGGACGCCGTCCGGTCCGCCGCTGCCGCCGGCCCCCGCCGGGCAGGCGCCCCCGGATCCC
ATGGTCCCGGAGCCACCGCG

Downstream 100 bases:

>100_bases
ACCCACCTCAAGACCGCAAGGAGACAACAGCGTGACCGTCACCGCCGACCAGGAACGCGCCACCGCCGACGATGTCGAGC
AGCCGCCCGACGATGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; Mce Family F; MCE Family Protein; MCE-Family Protein; MCE-Family; MCE-Family F; Mce-Family F; Mce Related Protein; Mce Family; Mce-Related Protein

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR
IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG
LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM
AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL
WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT
IPTPYGGPVLPIEPPH

Sequences:

>Translated_416_residues
MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR
IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG
LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM
AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL
WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT
IPTPYGGPVLPIEPPH
>Mature_416_residues
MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPESGGLLANQDVSVRGIRVGR
IRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADG
LLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM
AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL
WATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFT
IPTPYGGPVLPIEPPH

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44511; Mature: 44511

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEC
ESGGLLANQDVSVRGIRVGRIRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQ
CCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCCC
YIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADGLLAQTDPKKLEIVKRELSLS
EEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHCC
NQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM
CCCHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHH
AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHC
PNYRGSTLEALMTTMHEHGLWATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDP
CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCH
QVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFTIPTPYGGPVLPIEPPH
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDTLGRLVVGVVKAGHRQRTWLSGLALLVALVVGAAYLALGALRVNPLESTYQVTIRLP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEC
ESGGLLANQDVSVRGIRVGRIRSLRPIPSGVEVVANINAHTRIPASSPVRVSGLSPAGEQ
CCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCCC
YIDFEPTSNTGPFLSDGSVIGPQHTTTPIPLSQVLADADGLLAQTDPKKLEIVKRELSLS
EEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHCC
NQGPQKLTDIIDGSTFLLSTMDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLM
CCCHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHH
AGVNKMDRGYRRLVDQTPHALSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHC
PNYRGSTLEALMTTMHEHGLWATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDP
CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCH
QVLVRGAKNAPRPGGDDTAGPPPGADLGQTTDPTPKGRFTIPTPYGGPVLPIEPPH
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA